Metamycoplasma salivarium: NCTC10113_01144
Help
Entry
NCTC10113_01144 CDS
T07316
Symbol
rpoC_2
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
msai
Metamycoplasma salivarium
Pathway
msai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10113_01144 (rpoC_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msai03021
]
NCTC10113_01144 (rpoC_2)
03400 DNA repair and recombination proteins [BR:
msai03400
]
NCTC10113_01144 (rpoC_2)
Enzymes [BR:
msai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10113_01144 (rpoC_2)
Transcription machinery [BR:
msai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10113_01144 (rpoC_2)
DNA repair and recombination proteins [BR:
msai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10113_01144 (rpoC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
CAD7361046
UniProt:
A0A7R9GPL1
LinkDB
All DBs
Position
1:complement(209656..214059)
Genome browser
AA seq
1467 aa
AA seq
DB search
MKKSRKYATLDGDRISKISLALATANDVETWSHGEVTKPETINYKSYKPERGGLFDEIIF
GPMIDYRCPICGFKYKKINEGSFCTRTELCKQEKVEILPKISRRNHMGHIKLNSPVVHFW
FYKVDHSIIYKLLGLTFGKNHEPVKRIDLENLIYYKSHIVLENGGLKSLPKNTIIDINEA
AKIYKDALEELLARYEKGSEEYEDIKEIYDALIEKATSKIGQDYGIDFYEINEVIEHYTD
AKIGTGAAAIEYLLKNINLQEEKNKVSAEIKKINDEELENKQTASAKQVREKLYKRLQVI
NAFIESHQDPTSMLIYNLPVIPADLRPLIQLDGGRHSTSDINELYRRVIIRNNRLKQWQE
KDAPTLVVQNELRMIQEAVDALIDNARKSPNPVLSKDNRPFKSISDALTGKKGRFRQNLL
GKRVDYSGRSVIVVGPELKMYQCGIPREMAAKLFEPWIIHDLIAKNEATTVKQAKKMIED
QDPVIWPYVADAIKGRLVLLNRAPTLHRLSIQAFEPVLVRGKAIKLHPLVCTPFNADFDG
DQMAVHVPISEQALLEARELMLANKNILGPKDGEPIINPSQDMVLGVYYLTIEQENALGE
GKVFNDFDHMLRAYEAKKVSLHARVALPLAKVKSLKLFNQSSKPQYIISTVGKFIFNNIF
PESFPFIFNNEVGKSPSLDDYNKTIAPYIVPAGTDIVKYIKTLPLLSAFNKKNIARIIRH
VFDKYVAIVNLQSVATIIDKLNDIELSNVLLEYFNLDAYDGKKINREHAILLGAFTQQET
EKTLAASRDRTLNNADIPLSPKEKAEILDKVWFRYTNIVASILDDIKELGFKYSTISGIS
ISYSDILETNKKNEYLASGDEYIAKLREYYEEGMITDDERYSLTIKKWTEVKDNIQKELE
QIIKENPNNPVITMINSGARGNISNYVQLAGMRGLMANNTKTTKADARNDRVVRSTVEVP
VKSSFIEGLTAFEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQNIVVREENCGSDY
GYIAREIADTKTKQIIVPLAERIIGRYSNKPIYRKNNEELIVDRNEIITDKIAQQIIAEG
YTEVEIRSILGCNTKNGVCKMCFGKDLATNRLVNIGEAVGIIAAQSIGEPGTQLTMRTFH
TGGVAGEEDITGGFARLIELIDAHEQPWGHPAKISPREGVITKIEKNEKDANSYLVHIDF
VNENDVHEIEKVHVQTNKKLRVKVGDHVRIGQKLSEGPIILKELLELTDILTVQNYLLKE
IQRIYRIQGIAISDKYIEIIIRQMMSKVIITNPGDSKFFAGAIVDIFDYQEENASLLAQN
LKPAYGKVVIKGAKQVPLLSDSFLSAASYQETSKILVHAAISSRTDNLLGLKENIIIGKK
IPAGTSLYPFEKNSKYDIRPSIKYFQSYADGNSESEYLEFTPSPYEISEEDFQVDQNENI
HENEIDVNEQANVVEDEENATYSDDEN
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatctagaaaatatgcaacattagacggcgatagaatttcaaaaatttctctt
gcccttgcaactgctaatgatgttgaaacttgatcacatggtgaggttacaaaacctgaa
actattaactataaaagttataaaccagaacgtggcgggctttttgatgaaataattttt
ggtccaatgatcgattatcgttgtccaatttgtggtttcaaatacaaaaagattaatgaa
ggttcattttgtacaagaactgaattgtgtaaacaagaaaaggttgaaattttacctaaa
atctcacgtcgtaaccacatgggacatattaaactaaatagtcctgttgtccatttttga
ttttataaagtagatcactcaattatttataaacttttaggtttaacttttggtaagaat
catgaacctgtaaaaagaattgaccttgaaaatttaatttattacaagagtcatattgtt
ttagaaaatggtgggttaaaatcattaccaaaaaacacaattattgatattaatgaagct
gcaaaaatttataaagatgctttagaagaattattagccagatacgaaaaaggttctgaa
gaatacgaagatattaaagaaatttatgatgctttaattgaaaaagcaacttcaaaaatt
ggtcaagattatggaattgatttttacgaaatcaatgaagttattgaacattatactgat
gctaaaattggtactggtgctgctgcaattgaatatttactaaaaaatattaatttgcaa
gaagaaaaaaataaagttagtgctgaaatcaaaaaaattaatgatgaagaattagaaaat
aaacaaactgcatctgctaaacaagttagagaaaaactttacaaacgtttacaagttatt
aatgcatttattgaatcacatcaagatccaacaagtatgttaatttacaatctacctgtt
attcctgctgacttgcgtcctttaattcaacttgatggtggacgtcattcaacttctgat
attaatgaactttaccgtagagttattattagaaacaaccgtttgaaacaatgacaagaa
aaagatgctccaacattagttgtccaaaacgaacttagaatgattcaagaagcagttgat
gctttaattgataatgcaagaaaatcaccaaatcctgtgctttcaaaagacaatcgtcca
tttaagtcaatttcagatgccttaactggtaaaaaaggtcgctttagacaaaacttatta
ggaaaacgtgttgactattctggccgttctgtaattgttgttggtcctgaacttaaaatg
tatcaatgtggtattccacgtgaaatggctgcaaaattgtttgaaccttgaattattcat
gatttaattgctaaaaatgaagcaacaactgttaaacaagctaagaaaatgattgaagat
caagatccagttatttgaccatatgttgctgatgctattaaaggaagattagtcttatta
aaccgtgcacctacattacaccgtttatcaattcaagcttttgaacctgttttagttaga
ggaaaggctattaaattacatccattagtatgtacaccattcaacgctgactttgatggt
gaccaaatggccgttcatgttcctatttcagaacaagctttattagaggctagagaatta
atgttagctaataaaaacattttaggtcctaaagatggtgaacctattattaacccatca
caagatatggttttaggcgtttattatctaactattgaacaagaaaatgctttaggtgaa
ggtaaagtatttaacgactttgatcatatgttaagagcttatgaagctaaaaaagtttca
ttacatgcacgtgttgcattacctcttgcaaaagtaaaaagcttaaaactatttaatcaa
agttcgaaacctcaatatatcatttcaactgttggtaaatttatttttaacaacattttt
cctgaaagcttcccatttattttcaataatgaagttggaaaatctccttcattagatgat
tataataagacaattgcaccttatattgttcctgctggaactgatattgttaaatatatt
aaaacattacctttgctatcagcatttaataagaaaaacattgcaagaatcattcgtcat
gtatttgataaatatgttgcaatcgttaacttacaaagtgttgctactataattgacaaa
ctaaatgacattgaactatcaaatgttttattagaatatttcaacttagatgcatatgat
ggtaagaaaattaaccgtgaacatgctattttattaggtgcatttacccaacaagaaact
gaaaaaactcttgctgctagtcgtgatcgtacattaaataatgcggatattccattatct
ccaaaagaaaaagctgaaattttagacaaggtttgatttagatatacaaacattgtcgct
tcaattttggatgatattaaagaacttggatttaaatattcaacaatttctggtatctca
atttcttattcagatattttagaaactaacaagaaaaatgaatatttagcttcaggcgat
gaatatattgctaagttaagagaatattatgaagaaggtatgattaccgacgatgaaaga
tattcattaacgattaagaaatgaaccgaagttaaagataatattcaaaaagaactagaa
caaatcattaaagaaaatccaaataaccctgttattacaatgattaattctggtgctcgt
ggtaatatttctaactacgttcaacttgctggtatgcgtggacttatggctaataacact
aaaaccacaaaagccgatgctagaaacgatagagttgttcgttcaactgttgaagttcct
gttaaatcttcatttattgaaggtcttactgcattcgaattttattcatcaactcacggt
gctcgtaaagggcttaccgatactgcattaaacactgcaaaatcaggttatttaacccgt
cgtttagttgatgttgctcaaaacattgttgttagagaagaaaattgtggttctgattat
ggttatattgctagagaaattgctgatacaaaaaccaagcaaattattgttcctttagca
gaaagaattattggacgttatagtaataaaccaatttatcgtaaaaataatgaagaattg
attgttgatcgtaacgaaattattactgataaaattgcccaacaaattattgctgaagga
tataccgaagttgaaattcgttcaatcttaggctgcaacactaaaaatggtgtatgcaaa
atgtgttttggtaaagatttagcaaccaatagacttgttaacattggagaagctgttgga
attattgcagcacaatcaattggtgaacctggtacacaacttaccatgcgtaccttccat
actggtggtgttgctggtgaagaagatattactggtggttttgcgagattgattgaactt
attgatgctcacgaacaaccttgaggacatcctgcaaaaatttcacctcgtgaaggtgtt
ataacaaaaattgaaaagaatgaaaaagatgcaaactcatatctagttcatattgatttt
gttaatgaaaatgatgttcatgaaattgaaaaagttcatgttcaaactaacaaaaaattg
agagttaaagttggcgatcatgttagaattggacaaaaattatctgaaggtcctattatt
ctaaaagaattattagaattgacagacattctaactgttcaaaactatttactaaaagaa
attcaaagaatttatcgtattcaaggtattgcaatttctgacaaatatattgaaattatt
attcgtcaaatgatgtctaaagtaattattaccaatcctggcgattctaaattttttgca
ggtgctattgttgatattttcgactatcaagaagaaaatgcaagtctacttgcacaaaac
ctaaaacctgcttatggaaaagttgttattaaaggtgcaaaacaagttcctttattatca
gattcattcttatcagctgcatcatatcaagaaacttcaaagattttagttcatgctgca
atttcttcaagaacagacaatttgttaggccttaaagaaaatataattattggaaagaaa
attcctgctggaacttctctatatccatttgaaaaaaattcaaaatatgatattcgtcct
tctataaaatacttccaatcatatgctgatggaaattctgaaagcgaatatttagaattt
actccaagtccatatgaaatttcagaagaagattttcaagttgatcaaaacgaaaatatt
cacgaaaatgaaattgatgttaatgaacaagctaatgttgttgaagatgaagaaaatgca
acttattcagatgatgaaaattaa
DBGET
integrated database retrieval system
