Metamycoplasma salivarium: NCTC10113_01350
Help
Entry
NCTC10113_01350 CDS
T07316
Symbol
polC_2
Name
(GenBank) DNA polymerase III polC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
msai
Metamycoplasma salivarium
Pathway
msai03030
DNA replication
msai03430
Mismatch repair
msai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10113_01350 (polC_2)
03430 Mismatch repair
NCTC10113_01350 (polC_2)
03440 Homologous recombination
NCTC10113_01350 (polC_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msai03032
]
NCTC10113_01350 (polC_2)
03400 DNA repair and recombination proteins [BR:
msai03400
]
NCTC10113_01350 (polC_2)
Enzymes [BR:
msai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10113_01350 (polC_2)
DNA replication proteins [BR:
msai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10113_01350 (polC_2)
DNA repair and recombination proteins [BR:
msai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10113_01350 (polC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
HHH_6
PHP
DNA_pol_A_exo1
tRNA_anti-codon
DNA_pol3_a_NI
HHH_3
RNase_H_2
T2SSK
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
CAD7361245
LinkDB
All DBs
Position
1:458661..462995
Genome browser
AA seq
1444 aa
AA seq
DB search
MENSNNLYNDGFLKLCKEINFVPTDVFQDVDIKKVDITTKDNQPLLNIELETITHLPLSS
YLEFKKAIEKRFKSNVNFDIKYTNVIYAKERILEYFLQYIVDNKLRLPLVRSLFTKENIE
INLNTKQLTISNLTKDACKTLKKVEDKILSIFHNIGFNDITLKFVPIEEDNQDFSNYKKA
KIDNIVTDFIPQQVDFEALANNKKTKKYNGKSKKHIQMSIKSALESYEEYISVVGEIYKI
DKRLTKTGENLYSIDISDYEEAIRIIYFTEPNQVLEVDKGDTIIVNGRLTTTNYGNKEIL
CTTAPIKTESLVKLKKDNAPIKRIELAARTIMSTQDGISKPSEYIDVAKNSKINAIAITD
LDSVQSFPVFEKEAKANKIKPIYGVTLSSITTSNDIFYGYKDFNLKKAKYIVFDLETTGL
SARFNEVIEFGAIVIDNGIITEHIQFFLKPSKHIPKSITDITKITDDDVKDGLSQEEGIK
KIYELLNGNIGVAHNANFDINICKQNFTKYGLDISQIYCVDTLAISWFLFPDERKHNLNS
LCNRFNINYTKSAAHRADYDAEVLANCWLGIINKLNKEYKIKTSEQLNDVDFKESLGKKF
SYEIRMLAKNQAGIKKMFKYVSESLTTNYNNGPKFYIDKWKKDNDLLLGSGTHSSYLWEQ
VINGSDENILKAIAPFDYIELPPISTFNYLYLDDWITLEQIQWAYKDLIEKAKKLGKVCV
AVCDCRYVYDYQKLIYDIYVNTPGLGGKIHWMKENRKICRTNFQYLTTTEMLSEFSFLNN
GNLVEDIVVNNTHKIANMIDDNIEIIKKKLYVPNFDNSDKKLKDLVLENAKKIYGDKIDE
RIKQRIEKELNSIIKYGYSVIYWISHKLVKKSNIDGYIVGSRGSVGSSIVAYLAEITEVN
PLEPHYLCPKCKYFEWSNDPKIYSGWDLSDKKCPKCNVLMKNDGHNIPFETFLGFEADKV
PDIDLNFSGEYQPTIHNYVKELFGDTHTLRAGTIASVASKTAYGFCKKYLETIGGNEDQI
WSRTFLDFLSYKAEGVKRTTGQHPGGIIIIPKEFDPEDFTPVNYPANDITSSWMTSHFDF
RSIHDNVLKLDLLGHDDPTIVKMLEDLTHTKIENIPRYDKRIIQLFNSTKAMNLTPDQLS
GETTGAYGLPEFGTNFVRKMLKSSKPESFNDLILLSGLSHGTNVWTGNAEELIKVGKKLN
ECICCRDDIMRTLIETYFLDKLMAFKIMESVRKGKGLTEEQEKTLIEHNVPDWYIDSLKK
IEYMFPKAHATAYVIMAWRIAWYKIYYPLQFYAAHLSTKNFCIDVEVMVGGKQIVSSRLN
QLRTMQDKKDPDFTTKDSQFIPVLEITQELYARGFKVTNPDLYKSNASAWAVDEKTNTLI
PPFAAIEGLGDKAADSIVSARKDGEFLSIEDLVERTKLNSKNIESLKKLHVLDDLNETNQ
ASLF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattccaacaatctatataatgatggttttttaaaactctgcaaggaaataaat
tttgttcctacagatgtttttcaagatgtagatattaaaaaagttgatattacaaccaaa
gataatcaacccttattaaatattgagttagaaacgattactcatttacccttaagttca
tatttagaatttaaaaaagcaatagaaaaaaggtttaaatctaatgtaaattttgatatt
aaatatacaaatgtaatttatgcaaaagaaagaattttagaatattttttacaatacatt
gtagataacaaactaagattacctctagttagaagtttatttactaaggaaaatattgaa
attaacttaaatactaagcaattaactatttctaatttaacgaaagatgcgtgcaagaca
ttaaagaaagttgaagataaaatattatcgatttttcataatattggttttaatgatatt
acattaaaatttgtaccaatcgaagaggataatcaagatttctcaaattataaaaaagca
aaaattgataatattgtgaccgattttattcctcaacaagttgattttgaagcattagct
aataataaaaaaactaagaaatacaacggaaagtcgaagaaacatattcaaatgtcaatt
aagtctgctttagaatcatacgaagaatatatttcagtggttggtgaaatttataaaatt
gataagagattgactaaaacaggtgaaaatttatattcaattgatatttctgattatgaa
gaagctattagaatcatctattttactgaaccaaatcaagttttagaggttgataaaggc
gatactatcattgttaacggcagactaacgacaacaaattatggcaacaaagaaatattg
tgcactacagctcctattaaaactgaaagtcttgtgaaattaaaaaaagataatgcgcca
ataaaaagaattgaattagcagcaagaacaataatgtcaacacaagatggaattagtaaa
ccatccgaatatattgatgtagcaaaaaattcaaaaataaatgcaatagcaattactgat
ttagattctgtccaaagttttccagtttttgaaaaagaagcaaaagcaaataaaattaaa
cctatttatggtgtaactttatcttcgattacgactagcaatgatattttttacggttat
aaagatttcaacttaaagaaagcgaagtatattgtttttgacttagaaaccactggactt
agtgcgagatttaatgaagttatagaatttggtgcaattgttattgataacggaattatt
actgaacatattcaattctttttaaaaccttcaaaacatattccaaaatcaattacagat
attacaaaaattactgatgatgatgttaaagatggtttatctcaagaagaaggaataaaa
aaaatttatgaattgctaaatggaaatattggcgttgcacataatgcaaatttcgatatc
aatatttgtaagcaaaactttacaaaatatggccttgatatatcacaaatttattgtgtt
gataccttagctatttcatgatttttgtttcctgatgaaagaaaacacaatttaaatagt
ttgtgtaatagatttaatattaattatacaaaaagcgctgcgcatagagctgattatgat
gctgaagttttggcaaattgttgacttggaataattaataaattaaacaaagaatacaaa
attaaaacatcagaacaattaaatgatgttgattttaaagaatctttaggaaagaaattt
tcttacgaaattagaatgcttgctaagaaccaagcaggtattaaaaagatgtttaaatat
gtttcagaaagtttaactacaaattacaataatggacccaaattttatattgacaagtga
aaaaaagacaatgatttgcttttaggttctggaacacattcttcatatttgtgagaacaa
gtaataaatggtagtgatgagaatattttaaaagcaattgcaccatttgattatattgaa
ttacctccaatttcaacatttaattatttatatttagatgattggattacgctagaacaa
attcaatgggcatataaagatttaatagaaaaagctaaaaaattaggaaaagtttgcgtt
gctgtttgtgattgtagatatgtttatgactaccaaaaactaatttatgacatttatgtt
aacacacctggacttggtggaaaaattcattgaatgaaagaaaacagaaagatttgtcgt
acaaactttcaatatctaacaactactgaaatgttaagtgaattctcatttttaaataat
ggaaatttagttgaagatattgttgttaataatactcacaaaatagcaaatatgattgac
gataatattgaaattatcaagaaaaaactatatgttcctaactttgataattctgataag
aagttgaaggacttagtgttagaaaatgccaaaaaaatttatggtgataaaattgatgaa
agaatcaaacaaagaattgaaaaagaattaaattcaattattaagtacggatattcagtc
atttattgaattagtcataaacttgttaaaaaaagtaatattgatggttatattgttggt
agtagaggtagtgttggatcatcaattgttgcttatttagccgaaattactgaagttaat
cccttagaacctcattatttatgtccaaaatgtaagtattttgaatgaagcaatgaccct
aaaatttattcgggatgagatttatctgacaaaaaatgtcctaaatgtaatgttcttatg
aaaaatgatgggcataacataccatttgaaaccttcttgggttttgaagcggataaagtt
cctgatattgacctaaattttagtggtgaatatcaaccaacaattcacaattatgttaaa
gaattgtttggcgacacacacactttaagagctggaactattgcatctgttgcctcaaaa
actgcatatggtttttgcaaaaaatatttagaaactattgggggaaatgaagatcaaatt
tggtctagaactttcttagacttcctatcttataaagcagaaggtgttaaaagaacaaca
ggtcaacatccaggcggaattatcattattccaaaggaatttgatcctgaagattttact
ccagttaactacccagcaaacgatataacaagtagttgaatgacatcacattttgatttt
aggtcaattcatgacaatgttttaaaattagatttactaggacatgatgatcctacgatt
gttaagatgcttgaagatttaacacataccaaaatcgaaaatattccaaggtacgacaaa
agaattattcaactatttaatagcacaaaagcaatgaatttaacacctgaccaattatct
ggagaaactactggagcatatggacttcctgagtttgggacaaactttgtgcgaaagatg
ttaaaaagttcaaaaccagaatcatttaatgatttaattttactttcaggtcttagccat
ggtactaatgtgtgaaccggaaatgctgaagaattaatcaaagttggcaaaaaacttaat
gaatgtatttgttgtcgtgatgacattatgagaactttaattgagacttatttccttgat
aaacttatggctttcaaaattatggaaagtgttagaaaagggaaaggtttaactgaagag
caagagaaaactttaattgaacataatgttccggattgatatattgattcgcttaaaaaa
attgaatatatgtttcccaaggcacacgctactgcttatgttattatggcttgaagaatt
gcatgatataaaatttattatccattgcaattttacgctgcacatttgtcaaccaaaaac
ttttgtattgatgtagaagtaatggtcggcggtaaacaaattgtttcatcaagattaaat
caacttagaacaatgcaagataaaaaagaccctgattttacaactaaagattcacaattt
attcccgttttggaaatcacacaagaattatatgcaaggggatttaaagttacaaatcca
gatttatataaatcaaatgcatctgcttgagcggttgatgaaaaaaccaatactttaatt
cctccatttgctgcaattgaagggttaggagataaagctgcagattctatagttagtgct
agaaaagatggagaattcttatcaattgaagatttagttgaacgaacaaaattaaattct
aaaaatattgaatcactaaaaaaattacacgtcttagatgatttaaatgaaacaaatcaa
gctagtttattctaa
DBGET
integrated database retrieval system
