Mycobacterium saskatchewanense: MSAS_04080
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Entry
MSAS_04080 CDS
T07413
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak03030
DNA replication
msak03410
Base excision repair
msak03420
Nucleotide excision repair
msak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSAS_04080 (polA)
03410 Base excision repair
MSAS_04080 (polA)
03420 Nucleotide excision repair
MSAS_04080 (polA)
03440 Homologous recombination
MSAS_04080 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msak03032
]
MSAS_04080 (polA)
03400 DNA repair and recombination proteins [BR:
msak03400
]
MSAS_04080 (polA)
Enzymes [BR:
msak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSAS_04080 (polA)
DNA replication proteins [BR:
msak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MSAS_04080 (polA)
DNA repair and recombination proteins [BR:
msak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MSAS_04080 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSAS_04080 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
BBX61234
LinkDB
All DBs
Position
413177..415909
Genome browser
AA seq
910 aa
AA seq
DB search
MTAAKTASKAPGSIEAEPAKPTLMLLDGNSLAFRAFYALPTENFKTRGGLTTNAVYGFTA
MLINLLRDEAPTHIAAAFDVSRQTFRSERYPEYKANRSTTPDEFHGQIDITKEVLAALGI
TVLAEPGFEADDLIATLATQAENEGYRVLVVSGDRDSLQLVSDDVTVLYPRKGVSELTRF
TPEAVVEKYGLTPTQYPDFAALRGDPSDNLPGIPGVGEKTASKWIIEYGSLQSLVDNVDS
VRGKVGDALRAHLANVIRNRDLTELIRDVPLAQTPDTLRMQPWDRDQIHRLFDDLEFRVL
RDRLFDTLAAVEPEVDEGFDVRGGALEPGTVGRWLAEHAGDGRRAGLAVVGTHLPHGGDA
TALAFAAADGEGAYVDTATLTPDDEAALQAWFADPAQPKALHEAKLAIHDLAGRGWTLNG
VTSDTALAAYLVRPGQRSFTLDDLSLRYLRRELRAEKAEQQQLSLLDDMEGVDEQAVQTL
VLRARAVADLADALDGELDRIDSTALLGDMELPVQRVLASMESAGIAVDLPLLTELQSQF
GDEIRDAAEAAYAVIGKQINLGSPKQLQAVLFDELGMPKTKRTKTGYTTDADALQSLFDK
TGHPFLQHLLVHRDVTRLKVTVDGLLNSVADDGRIHTTFNQTIAATGRLSSTEPNLQNIP
IRTDAGRQIRDAFVVGDGYSELMTADYSQIEMRIMAHLSKDEGLIEAFNTGEDLHSFVAS
RAFGVPIGEVTPELRRRVKAMSYGLAYGLSAYGLSTQLKISTEEAKVQMDQYFARFGGVR
DYLMAVVEQARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVA
MIEVDKAIKEAGLASRMLLQVHDELLFEIAPGERERVEALAREKMGGAYPLDVPLEVSVG
YGRSWDAAAH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
gtgactgccgcgaaaaccgccagtaaggcccccgggtctatcgaagcggaacccgccaag
cccacgctgatgttgctggacggcaattcgctggcgttccgggcgttctatgcgctgccc
accgagaacttcaagacccgcggcggcctgaccaccaacgcggtctacggcttcaccgcc
atgctgatcaacctgctgcgcgacgaggcgcccacgcacatcgcggcggcgttcgacgtg
tcgcggcagacattccgctccgagcgctaccccgagtacaaggccaaccggtcgacgacg
cccgacgagttccacggccagatcgacatcaccaaggaagtcctggccgcgctgggcatc
acggtgctcgccgagccgggattcgaggccgacgacctgatcgcgacgctggccacccag
gccgagaacgagggctaccgcgtgctggtggtcagcggtgaccgcgattccctgcagctg
gtcagcgacgacgtgaccgtgctttacccgcgcaaaggcgtcagcgaactgacccgcttc
acccccgaggccgtcgtcgagaagtatggcctgacgcccacgcagtaccccgattttgcc
gcgctgcgtggcgatcccagcgacaacctgcccggcattcccggcgtcggggagaagacc
gcatcgaaatggatcatcgagtacggctcgctgcagtccttggtcgacaacgtcgactcg
gtgcgcggcaaggtcggcgacgcgctgcgcgcgcacctggccaacgtgatccgcaaccgc
gacctcaccgagctgatccgcgacgtgccgttggcccagacgccggacacgctgcggatg
cagccctgggaccgcgaccagatccaccggctcttcgacgacctggagttccgggtgttg
cgggaccggttgttcgacacgctggccgccgtcgagccggaggtcgacgagggtttcgac
gtgcgcggcggcgcgctcgagcccggcaccgtcgggcggtggctggccgagcacgccggc
gacggtcgccgggccgggctggccgtcgtcgggacgcacctgccccacggcggggatgcg
acggcgttggcgttcgccgcggccgacggggagggcgcctacgtcgacacggcgacgttg
acgcccgacgacgaggccgcgctgcaggcctggtttgccgatccggcgcaacccaaagcg
ctgcacgaggcgaagctggccatccacgacctggcggggcgcggctggacactgaacggc
gtcacctccgacacggcgctggccgcctacctggtgcggccggggcagcgcagcttcacc
ctcgacgacctgtcgttgcgctacctgcggcgcgagctgcgtgcggaaaaagctgagcag
caacaactttcgcttctcgacgacatggagggcgtcgacgagcaggccgtccagacgctt
gtcctgcgggcccgcgccgtcgcggacctcgcggacgcgctggacggcgagctggatcgc
atcgactccaccgcgctactgggcgacatggaactgcccgtgcagcgggtgctggcgagc
atggaaagcgccggtatcgccgtcgatctgccgctgctgaccgagctgcagagccagttc
ggcgacgagatccgcgacgccgcggaggcggcatacgccgtcatcggcaagcagatcaac
ctcggctcacccaagcagttgcaggcggtgctgttcgacgaactcggcatgccgaagacc
aagcggaccaagacggggtacaccaccgatgccgacgccctgcagtcgctgttcgacaag
accgggcacccattcctgcagcacctgctcgtccaccgcgacgtgacgcggctgaaagtc
accgtggacgggctgctgaactcggtggccgacgacggccgcatccacaccaccttcaac
cagacgatcgccgcgaccggccggctgtcgtcgaccgaacccaacctgcagaacatcccg
atccgcacggacgcgggccgtcagatccgcgacgcgttcgtggtgggggacggctactcg
gagctgatgaccgccgactacagccagatcgagatgcggatcatggcgcacctttcgaag
gacgagggcctcatcgaggccttcaacacgggggaggacctgcactcgttcgtggcctcc
cgcgcgttcggcgtgccgatcggggaggtcacccccgagttgcggcgccgggtgaaggcc
atgtcgtacgggctggcctacggcctcagcgcctacgggctgtccacccagctgaagatc
tccaccgaggaggcgaaagtccagatggaccaatacttcgcccggttcggcggggtgcgc
gactacctgatggcagtggtcgagcaggcccgcaaggacggctacacgtccacggtgctg
ggccgccgccgctacctccccgagctggacagcagcaaccgtcaggtccgggaggccgcc
gagcgggcggcgctcaacgcgcccatccagggcagcgccgccgacatcatcaaggtggcc
atgatcgaggtggacaaggcgatcaaggaggccgggctggcgtcgcggatgctgctgcag
gtccacgacgagctgctgttcgagatcgcgcccggcgaacgggagcgggtcgaggcgctg
gcgcgcgaaaagatgggcggcgcttacccgctcgacgtcccgctcgaggtttcggtgggt
tacggtcgctcctgggacgcggccgcacactag
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