Mycobacterium saskatchewanense: MSAS_04090
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Entry
MSAS_04090 CDS
T07413
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MSAS_04090 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
msak03011
]
MSAS_04090 (rpsA)
Ribosome [BR:
msak03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
MSAS_04090 (rpsA)
Bacteria
MSAS_04090 (rpsA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_PDCD11
S1_2
DUF2110
SOGA1-2-like_CC
YBL029W_C
Motif
Other DBs
NCBI-ProteinID:
BBX61235
LinkDB
All DBs
Position
416248..417735
Genome browser
AA seq
495 aa
AA seq
DB search
MSLRPNLSGATHHMPSPTVTSPQVAVNDIGSSEDFLAAIDKTIKYFNDGDIVEGTIVKVD
RDEVLLDIGYKTEGVIPARELSIKHDVDPSEVVTVGDEVEALVLTKEDKEGRLILSKKRA
QYERAWGTIEALKEKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGK
EIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFVD
LGGVDGLVHVSELSWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSLKATQEDPWRHF
ARTHAIGQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVK
VIDIDLERRRISLSLKQANEDYTEEFDPAKYGMADSYDEQGNYIFPEGFDAETNEWMEGF
DAQRNEWEARYAEAERRHKMHTAQMEKFAAAEAAGHGAGDQSSGSGGAREEKAAGGSLAS
DAQLAALREKLAGNA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ttgtccctacgacccaacctgtccggagcaacccaccacatgccgagtcccaccgtcacc
tcgccgcaagtagccgtcaacgacattggctccagcgaggactttcttgccgcaatagac
aaaacgatcaagtacttcaacgatggcgacatcgtcgaggggacgatcgtcaaagtggac
cgggacgaggtgctcctcgacatcggctacaagaccgaaggcgtcatccccgcccgcgag
ctctccatcaagcacgacgtcgaccccagcgaggtcgtcaccgtcggtgacgaggtcgag
gccctggttctcaccaaggaggacaaagagggccggctcatcctctccaagaagcgcgcg
cagtacgagcgcgcctggggcaccatcgaggcgctcaaggagaaggacgaggccgtcaag
ggcacggtcatcgaggtcgtcaagggtggtctgatcctcgacatcgggttgcgcggcttc
ctgcccgcctcgctggtcgagatgcgccgcgtccgcgatctgcagccgtacatcggcaag
gagatcgaggccaagatcatcgagctggacaagaaccgcaacaacgtggtgctctcgcgc
cgcgcctggctggagcagacccagtccgaggtgcgcagcgagttcctcaaccagctgcag
aagggcgccatccgcaagggcgtggtctcgtccatcgtcaacttcggcgcgttcgtcgac
ctcggcggtgtcgacggcctggtgcacgtgtccgagctgtcctggaagcacatcgatcac
ccgtccgaggtcgtccaggtcggcgacgaggtgaccgtcgaggtgctcgacgtcgacatg
gatcgcgagcgggtgtcgttgtcgctcaaggcgactcaggaagacccgtggcggcacttc
gcccgtacccacgcgatcggccagatcgtcccgggcaaggtcaccaagctggtgccgttc
ggcgcgttcgtccgcgtcgaggagggcatcgagggcctggtgcacatctccgagctggcc
gagcggcacgtcgaggttcccgaccaggtggtcgccgtcggcgacgacgccatggtcaaa
gtcatcgacatcgacctggagcgccgccggatctcgttgtcgctcaagcaggcgaacgag
gactacaccgaggaattcgacccggcgaagtacggcatggccgacagctacgacgagcag
ggcaactacatcttccccgagggtttcgatgccgagaccaacgagtggatggaagggttc
gacgctcagcgcaacgagtgggaggcccgctacgcggaggccgagcgccggcacaagatg
cacaccgcgcagatggagaagttcgccgcggccgaggccgccgggcacggcgccggagac
cagtcgtcgggcagcggcggggcacgcgaggagaaggcggccggtgggtccctggccagc
gacgctcaactggccgccctgcgggagaagctcgccggcaacgcttaa
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integrated database retrieval system
