Mycobacterium saskatchewanense: MSAS_11380
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Entry
MSAS_11380 CDS
T07413
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak03030
DNA replication
msak03430
Mismatch repair
msak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSAS_11380
03430 Mismatch repair
MSAS_11380
03440 Homologous recombination
MSAS_11380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msak03032
]
MSAS_11380
03400 DNA repair and recombination proteins [BR:
msak03400
]
MSAS_11380
Enzymes [BR:
msak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSAS_11380
DNA replication proteins [BR:
msak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSAS_11380
DNA repair and recombination proteins [BR:
msak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSAS_11380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
OHCU_decarbox
DUF7508
Motif
Other DBs
NCBI-ProteinID:
BBX61964
LinkDB
All DBs
Position
1207217..1209142
Genome browser
AA seq
641 aa
AA seq
DB search
MSVGVPNVSAMGAGGAAQLSFADLGPPLVADEISLREMTFVVVDLETTGGRTKSTDAAVA
DAITEIGAVKVRGGVVLGEFATLVDPQRTIPPQIVQLTGITTAMVCDAPTIDAVLPMFME
FAGFEHGTVLVAHNAGFDHGFLRAAAERCGMPWPRPRVLCTVRLARRVLSREEAPSVRLA
ALARLFAVAAQPTHRALDDARATVEVLHALIERVGNQGVSTYADLRSYLPDVTPAQRRKR
VLAEGLPRRPGVYLFRGPSGEVLYIGTAVDLRRRVNQYFTGADPRGRMKEMVNLATAVDH
VECAHALEAGVRELRLLAAHAPPYNRRSRFPHRWWWVTLTDEAFPRLSVMRAPRHDRAIG
PFRSRADAADTAALFARFTGLRTCTARLARSGLHGPACPPLEVSPCPAVREATAIQYAAA
VARAAALIDGSDNSALAEAVQQVTALAEHHHFESAARLRDRTAVAVEALWRGQRLRALAA
MPELTAAAPDGQGGYQLAVIRHGQLAAAGTARRGVPPMPVIDAIHAGAQAILPAASPLGG
ALVEETALIARWLAGPGVRIVRVADASDEGWASPLRSAGAWAAWAAAARSARLAGEQLRD
SDLLAEPHPSREQLFGSPGVDGRGGALQPVLPRRQPFGAAG
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtgggtgtgcctaacgtctcggccatgggtgcaggcggggccgctcagctgagt
ttcgccgatctggggccgccgctcgtggccgacgagatctccttgcgcgaaatgactttc
gtcgtggtcgacttggaaaccaccggtgggcgcaccaagagcaccgacgcggcggtggcc
gatgccatcaccgagatcggggcggtcaaggtccgcggcggcgtcgtgctcggcgagttc
gccaccctggtcgacccgcagcgcaccatcccgccccagatcgtgcagctgaccggcatc
accacggcaatggtgtgcgacgccccgaccatcgacgccgtgctgccgatgttcatggag
ttcgccggcttcgagcacgggaccgtgctggtcgcgcacaacgccgggttcgaccacggg
ttcctgcgcgcagcggccgagcggtgcgggatgccctggccgcggccccgggtgctgtgc
acggtccggctggcccgccgggtgctgagccgtgaggaagcacccagcgtgcggcttgcc
gccctggcgcggctgttcgccgtcgccgcgcagcccacccaccgcgccctcgacgacgcc
cgggccaccgtcgaggtgctgcacgccctcatcgagcgggtgggcaaccagggcgtgtcc
acctacgccgacctgcgctcgtatctgccggacgtgacgcccgcccagcgacgcaagcgc
gtcctcgccgaggggctgccccgccggccgggcgtctatctgttccgcgggccgtccggc
gaggtgctctatatcggcaccgcggtcgacctgcgacgccgggtgaaccagtacttcacc
ggcgccgatccccgcggccggatgaaggagatggtcaacctcgccaccgcggtcgaccac
gtcgagtgcgcgcacgcgctcgaggcgggggtgcgtgagttgcggctgctggccgcgcac
gccccgccgtacaaccgccggtcgaggtttccgcaccggtggtggtgggtgacgctgacc
gacgaggcgtttccccgcctgtcggtgatgcgggcgccgcggcacgaccgtgcgatcggc
ccgttccggtcccgcgccgacgccgccgatacggccgccctgttcgcccggttcaccggg
ctgcggacgtgcacggcgcggctggcgcgctcggggttgcacggcccggcctgtcccccg
ctggaggtgtcgccctgccccgccgtccgcgaggcgacggccatccagtacgccgccgcc
gtggcccgcgccgcggccctgatcgacggatcggacaactcggccctggccgaggccgta
cagcaggtgaccgcgctcgccgagcaccatcatttcgagagcgccgcgcggctgcgcgac
cgcaccgccgtcgccgtcgaggccctgtggcggggtcagcggctgcgcgccctggccgcg
atgcccgagctgaccgccgccgcacccgacggccagggcggataccagctcgccgtgatc
cgccacggtcagctcgccgcggccggcaccgccagacgcggtgtgcccccgatgccggtg
atcgacgcgattcatgcaggggcgcaagcgatcctgccggcggcgtcccccctcggcggc
gcgctcgtcgaggagaccgcgctcatcgcgcgatggctggccggcccgggcgtgcgcatc
gtgcgggtcgccgacgcctcggacgagggctgggcctccccgctgcggtcggccggcgcc
tgggcggcctgggcggcggcggcgcggtcggcccggctggcgggcgagcagctgcgggac
tcagacctgctggccgaaccgcacccatcgcgcgagcagctgttcggcagccccggagtc
gatggccgcggcggcgcgctgcagcccgtcctcccacgccggcaaccattcggcgcggct
ggatag
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