Mycobacterium saskatchewanense: MSAS_24430
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Entry
MSAS_24430 CDS
T07413
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak03420
Nucleotide excision repair
msak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSAS_24430 (uvrD1)
03430 Mismatch repair
MSAS_24430 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msak03400
]
MSAS_24430 (uvrD1)
Enzymes [BR:
msak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSAS_24430 (uvrD1)
DNA repair and recombination proteins [BR:
msak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSAS_24430 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
MSAS_24430 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
nSTAND_NTPase5
DEAD
Motif
Other DBs
NCBI-ProteinID:
BBX63269
LinkDB
All DBs
Position
complement(2628078..2630402)
Genome browser
AA seq
774 aa
AA seq
DB search
MSVHATDARSASEAEELLEGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLIAA
RGVGVGQILAITFTNKAAAEMRERVVRLVGPRARAMWVSTFHSTCVRILRNHATLIEGLN
SNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPAQAVSDLTDGSD
DLPRTVASVYGEYQRRLRAANALDFDDLIGETVAVLQTFPEIAQYYRRRFRHVLVDEYQD
TNHAQYVLVRELVGTDTEDGVPPGELCVVGDADQSIYAFRGATIRNIEDFERDYPDATTI
LLEQNYRSTQNILSAANSVIARNAGRRDKRLWTDAGAGELIVGYVADNEHDEARFVAEEI
DALADRGEITYNDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGGVRFYERKEIRDIVAYLR
VLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGSSFADALVAAAEGKVPMLNTRA
EKAIAGFVEMLDELRGRLDDDLGELVESVLERTGYRRELESSNDPQELARLDNLNELVSV
AHEFSTDRANAVALGEGAEAPEDEDVPDTGVLAEFLERVSLVADADDIPEHGAGVVTLMT
LHTAKGLEFPVVFVTGWEDGMFPHMRSLDDPAELSEERRLAYVGITRARQRLYLSRAIVR
SSWGQPMLNPESRFLREIPQELIEWRRTAPAPSFSAPVSGAGRFGTPRAAPTRSGAGKRP
LLVLEPGDRVTHDKYGLGRVEEVAGVGESAMSLIDFGSAGRVKLMHNHAPISKL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcacgcaaccgacgccagatccgcctccgaagccgaagagctgctcgagggc
ctcaacccgcaacagcgccaggcggtggtgcatgagggttctccgctgctgatcgtcgcc
ggcgcgggctcgggtaagacggcggtgttgacgcggcgcatcgcctacctgatcgcggcg
cgcggcgtcggcgtcggtcagatcctggcgatcactttcaccaacaaggccgccgcggag
atgcgcgaacgcgtggtgcggctggtcggcccccgggcccgcgcgatgtgggtgtctacg
ttccactcgacctgcgtacgcatcctgcgtaaccacgcgacgctgatcgagggcctcaac
tcgaacttctccatctacgacgccgacgactcccggcgcctgctacagatgatcgggcgc
gacatggggctcgacatcaagcggtactcaccgcgcctgctggccaacgccatctccaat
ctgaagaacgagttgatcgacccggcgcaggcggtgtccgacctgacggacggctccgac
gacctgccgcgcaccgtcgcctccgtctacggcgaataccagcgacggctgcgggcggcc
aatgcgctggacttcgacgatctcatcggggagacggtggccgtgttgcagacgttcccg
gagatcgcccagtactatcggcggcgcttccgccacgtcctggtcgacgaatatcaggac
accaaccacgcgcagtacgtcttggtgcgggagctcgtcggcacggacaccgaggacggc
gttcccccgggcgaattgtgtgtggtcggcgacgccgatcagtcgatctatgcatttcgc
ggtgccaccatccgcaacatcgaggacttcgaacgcgactacccggacgcgacaaccatt
ctgctggaacagaattaccgatccacccagaacatcctgtcggcggccaactccgtcatc
gcccgcaacgcgggtcgccgagacaagaggttgtggacggacgccggcgccggcgagctg
atcgtcggctacgtcgccgacaacgagcacgacgaggccaggttcgtggccgaggagatc
gacgcgctcgccgaccggggcgagatcacctacaacgacgtcgccgtgttctaccgcacc
aacaactcgtcgcggtccctggaagaggtgttcatccgcgccggcattccctacaaagtc
gttgggggagtgcggttctacgagcgcaaggagatccgcgacatcgtcgcctacctgcgc
gtgctcgacaaccccggcgatgccgtcagcatgcggcgcatcctcaacaccccgcgccgc
ggcatcggcgaccgggccgaggcatgcgtggcggtgtacgccgagaacaccgggtcgagc
ttcgccgacgcgctggtggccgcggccgaaggaaaagtgccgatgttgaacacccgcgcg
gagaaggcgatcgcgggttttgtcgagatgctcgacgagctcaggggacggctcgacgac
gacctcggtgagctggtcgagtcggtgctggaacggaccggctatcgcagggagctggaa
tcgtccaacgatccgcaagagctggccaggctggacaacctcaacgaactcgtcagcgtg
gcgcacgaattcagcactgaccgggcgaacgccgtcgcgctcggcgagggggcggaagcg
ccggaagacgaagacgtgccggacaccggtgtcctcgcggagttcctggagcgggtgtcg
ctggtcgcggatgctgacgacatccccgagcacggcgccggcgtcgtgaccctgatgacg
ttgcacaccgccaaaggcctggagtttccagtcgtgttcgtcaccggctgggaagacgga
atgttcccgcacatgcggtcgctggacgaccccgccgaactctccgaggagcggagactc
gcctacgtcggcatcacccgggcccgccagcgcctgtatctgagcagggccatcgtgcgg
tcttcgtggggacagccgatgcttaacccggaatcgcgattcctaagggagatcccgcag
gaactcatcgagtggcggcgcaccgcacccgccccatcgttcagcgcgccggtcagcggc
gctggccggttcgggacgccacgcgccgcaccgacccgctcaggcgcgggcaagcgtccg
ctgctggtgctcgagcccggcgatcgggtgacccacgacaagtacggcctgggcagggtc
gaggaagtcgccggggtgggcgaatccgccatgtccctaatcgacttcggcagcgccggt
cgggtgaagctgatgcacaaccacgccccgatcagcaagctctag
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integrated database retrieval system
