Mycobacterium saskatchewanense: MSAS_25520
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Entry
MSAS_25520 CDS
T07413
Symbol
ercc3
Name
(GenBank) DNA helicase Ercc3
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSAS_25520 (ercc3)
09124 Replication and repair
03420 Nucleotide excision repair
MSAS_25520 (ercc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msak03021
]
MSAS_25520 (ercc3)
03400 DNA repair and recombination proteins [BR:
msak03400
]
MSAS_25520 (ercc3)
Enzymes [BR:
msak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSAS_25520 (ercc3)
Transcription machinery [BR:
msak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MSAS_25520 (ercc3)
DNA repair and recombination proteins [BR:
msak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MSAS_25520 (ercc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
BBX63378
LinkDB
All DBs
Position
2741272..2742921
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHEQAGEARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSFDRAVLEEVL
RNKKIAPMLGARIDNDTVIVHPSERGRVKQMLLKVGWPAEDLAGYVDGEAHPISLAQDGW
QLRDYQEMATESFWAGGSGVVVLPCGAGKTLVGAAAMARASATTLILVTNVVAARQWKRE
LVARTSLTEDEVGEYSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSKRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTMTDNERMIYATSEPEERYKVCSTAHSKVAVVKSILGKHPDEQTLVIGAYLD
QLDELGAELNAPVIQGSTRTKEREALFDAFRRGEVSTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
ttgactgacggaccgttgatcgtgcagtccgacaagacggtgctgctcgaggtggaccac
gagcaggcaggcgaggcccgcgccgccatcgcgccgttcgccgagctggaacgagcaccc
gaacacgtccacacctaccgcatcaccccgttggcgttgtggaatgcccgggccgcgggc
cacgacgccgaacaggtggtcgacgcgctggtcagctattcgcgctacgcggtgccgcag
ccgctgctggtcgacatcgtcgacaccatggcccgctacggccggctgcaactggtcaaa
cacccggcgcatggcctgaccctcgtgagcttcgaccgcgcggtgctcgaggaggtgttg
cgcaacaagaagatcgcgccgatgctgggcgcccgcatcgacaatgacacggtcatcgtc
caccccagcgagcgcggacgggtcaagcagatgctgctcaaggtgggctggcccgccgag
gatctcgccggctacgtcgatggcgaggcgcacccgatcagcctggcgcaggacggctgg
cagttgcgcgactaccaggagatggccaccgaatcgttctgggccggcggctccggggtt
gtggtccttccgtgcggtgcgggcaagacgctcgtcggggccgccgcgatggccagggcc
agcgcgacgacgctcatcctggtcaccaacgtggtcgccgcgcggcaatggaagcgcgag
ctggtcgcgcgcacgtcgctgaccgaggacgaggtcggcgaatactccggggaacgcaag
gagatccggccggtgaccatctcgacctaccagatgatcacgcgtcgcaccaagggtgaa
taccggcacctggaactgttcgacagccgcgactgggggttgatcatctacgacgaggtg
catctcttgccggcaccggtgttccggatgaccgcagacctgcagtccaagcgacgcctc
ggcctgaccgccacgctggtccgtgaggacggccgcgagggcgacgtgttctccctgatc
ggccccaaacgctatgacgcgccatggaaggacatcgaagcgcagggctggatcgcgccg
gcggagtgcgtcgaggtgcgggtcacgatgaccgacaacgagcgcatgatctatgccacc
tctgaacccgaagaacgctataaggtttgctcgacggcacactcgaaggtcgcggtggtc
aagtcgattctgggcaaacaccccgacgagcagaccctggtgatcggcgcgtacctggat
cagctcgacgaactcggcgcggagctgaacgccccggtgatccagggttccacgcgcacg
aaggaacgcgaggcgctgttcgacgccttccggcgcggcgaggtgtccacgctggtggtg
tccaaggtggcaaacttctccatcgatctccccgaagcgtctgtggcggtgcaggtttcg
ggaacgttcggctcacgtcaggaggaggcccagcggctcggccggctgctgcgacccaag
gccgacggcggcggagcgatcttctattccgtggtcgcgcgcgacagcctggacgccgag
tacgccgcacaccggcaacggttcctggccgaacagggctacggttacatcatccgcgac
gcggatgaccttctgggcccagccatctag
DBGET
integrated database retrieval system
