Mycobacterium saskatchewanense: MSAS_33100
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Entry
MSAS_33100 CDS
T07413
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
msak
Mycobacterium saskatchewanense
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msak03000
]
MSAS_33100
Transcription factors [BR:
msak03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSAS_33100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MimR_N
HTH_8
MimR
AAA_lid_14
GAF
HTH_50
AAA_16
HTH_28
HTH_29
HVO_A0261_N
HTH_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BBX64136
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Position
3486019..3487869
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AA seq
616 aa
AA seq
DB search
MPDNPGRMLRVAAARADFLEYGSAGAAGVSDMVVASWERSQAAGVDVSSPNSVFTDDLDT
GSLLVRCARPVLEQLETDTADMPLVIALTDRKARVVRRIDSSAAVARLLDRVDLAPGFDY
SESTMGTNGIGTVFEAGQPISVVGPEHFSENLHLFACTGAPVIDPITGRVEGVLDISTLS
DAWSPLMHTLANSAAKDIGRNLLLDRGQSQRAIFETYLRVTARSPREAVFAFGDSVFVAN
PAAQQLFDPNEQRTLREHATFLMARNDRASDTLALPGGQRLVHIRGIRIIAGSEVAGMVV
VAELVTAHQPSSPRDFSEQQLPPIAMAAPQTSQIVDQLSRSRDSLAGGTAPAWMRAVGEL
RDALGQAKPALVLGEPGVGKFTLVAELFHAVYPEARSISLDAVQLNGGGPPSGITSLAGC
PREPTLHIIRHIDQAGADSVRCLEAYFSAVESLDGPVWIVATGSDSSAAAELPVRELLHH
FEIAITVPPLRCRTDDLPAITTALLRGIAPDRKVRMSPDAQRLISRYSWPRNITQLREAL
VHALHRRPVGEIQASDLPGHCQTAPRHTLTPLETAERDAIVAALQEANGNRMAAATHLGM
SRSSLYRKLKTYGITV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcccgataaccccggccggatgctgcgggtcgctgctgcccgtgcggactttcttgaa
tacggcagtgcgggggccgcgggcgtgtcagacatggtagtggcctcgtgggaacgcagt
caggccgccggcgtggacgtgtccagccccaacagtgtgttcaccgacgacctcgatacc
ggatcgctcctggtgcgttgcgcacgtccagtgctggagcagctcgagaccgataccgcc
gacatgccgctggtcatcgccttgaccgaccgcaaggcgcgggtcgtgcgacggatcgac
agctccgccgcggtggcacgtctgctcgaccgggttgacctggcacccggcttcgactac
tccgagtcgacgatgggcaccaacggtatcggcacggtgttcgaggcgggccaaccgatc
agtgtggtgggtcccgaacacttcagcgagaacctgcacctgttcgcctgtaccggagcc
ccggtgatcgacccgattaccgggcgcgtcgagggtgtactcgacatttcgacgctgtcg
gacgcgtggagtcccctgatgcacaccctggccaatagcgcggcgaaagacatcgggcgc
aatctcctgctcgaccggggccagtcgcaacgtgccatcttcgagacctacctgagggtc
accgcgcgctcgccccgcgaagccgtctttgcattcggagactccgtgttcgtggcaaat
cccgctgcccagcagctgttcgaccccaacgaacaacgcacactgcgcgagcacgcaaca
ttcctgatggcccgcaacgaccgggccagcgacaccttggctttgccaggagggcagcgg
ctggtccacatccgcggaatccgtatcatcgccggctctgaggtggcgggcatggtggtg
gtcgcggagctggtcaccgcgcaccaacccagctcgccgcgtgatttcagcgagcagcaa
ctgccacctattgcgatggcggcaccgcagacctcgcagatcgtcgaccagctgtctcgg
tcgcgcgactccctcgcggggggcaccgcgccggcctggatgcgagcggtcggcgagctg
cgcgatgcgctcggtcaagccaagccggccctggtgctcggcgagccgggcgtcggcaag
ttcacgctggtggccgagctgttccacgccgtctacccggaggcgcgcagcatctcgctc
gatgcggtgcaactcaatggcggggggccgccgtcgggcatcacgtcgctggcggggtgc
ccgcgggaacccacgctgcacatcattcgacacatcgaccaggcaggtgccgacagtgtg
cggtgcctggaggcttacttctcggcggtggaatcgctggacgggcccgtgtggatcgtg
gcaacgggttcggattcgtcggcggcggccgagctgccggtgcgagaactgctgcaccac
ttcgagatcgcgatcacggtgccgccactgcgttgccgcactgacgatttgcccgccatc
accacggcgttactgcgtggcatcgcccctgaccgcaaggtgcgcatgagccccgacgcc
caacgtctcatttcgcgatattcgtggccgcgcaacatcacgcaattgcgcgaagcactg
gtgcatgcgttgcatcgccgcccggtcggcgagatccaggcttccgatctgcccgggcac
tgtcagaccgcaccccggcatacgttgaccccgttggagacggccgaacgtgacgcgatc
gtggccgccttacaggaagccaacggcaacaggatggccgccgccacgcacctggggatg
tcgcgctcgagcctttaccgcaagctcaagacctatggcatcaccgtctga
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