Mycobacterium saskatchewanense: MSAS_33680
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Entry
MSAS_33680 CDS
T07413
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
msak
Mycobacterium saskatchewanense
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msak03032
]
MSAS_33680 (gyrB)
03400 DNA repair and recombination proteins [BR:
msak03400
]
MSAS_33680 (gyrB)
Enzymes [BR:
msak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MSAS_33680 (gyrB)
DNA replication proteins [BR:
msak03032
]
Prokaryotic type
DNA Topoisomerases
MSAS_33680 (gyrB)
DNA repair and recombination proteins [BR:
msak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSAS_33680 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
Motif
Other DBs
NCBI-ProteinID:
BBX64194
LinkDB
All DBs
Position
3556872..3558929
Genome browser
AA seq
685 aa
AA seq
DB search
MTEPLARNPEESFPNVAAKNQYGADSIKVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVV
DNAVDEAMAGFATKVTVRLLDDGGVEVADDGRGIPVEMHSTGVPTVDVVMTVLHAGGKFE
QGAYQVSGGLHGVGVSVVNALSSRLEADIRRDGYEWSQVYTNSVPGVLKQGEKTRKTGTT
IRFWADPEIFETTDYDFETVARRLQEMAFLNKGLTIELTDERVTKEEVVDEVVSDTAEAP
KSAEEKAAETVGAHKVKHRTFHYPGGLVDFVKHINRTKSPIQQSIIGFEGKGDGHEVEVA
MQWNGGYSESVHTFANTINTHEGGTHEEGFRSALTTVVNKYAKDKKLLKDKDPNLTGDDI
REGLAAVISVKVSQPQFEGQTKTKLGNTEVKSFVQKVCNEQLTHWFEANPADAKVVVNKA
VSSAQARIAARKARELVRRKSATDLGGLPGKLADCRSTDPRKSELYVVEGDSAGGSAKSG
RDSMFQAILPLRGKIINVEKARIDRVLKNTEVQAIITALGTGIHDEFDLTKLRYHKIVLM
ADADVDGQHISTLLLTLLFRFMRPLIENGHVFLAQPPLYKLKWQRTDPEFAYSDRERDGL
LEAGLKAGKKINKEDGIQRYKGLGEMDAKELWETTMDPSVRVLRQVTLDDAAAADELFSI
LMGEDVDARRSFITRNAKDVRFLDV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaccgcttgcacgtaaccccgaggagagctttccgaacgtggctgccaaaaac
cagtacggtgctgattcaatcaaggtcctcgaagggctggaagcggtccgcaaacgcccc
ggtatgtacatcggctctaccggcgagcgaggtttgcaccatttggtctgggaggtggtc
gataacgccgtcgacgaggcgatggccgggttcgccaccaaagtgacggtccggctgctc
gatgacggcggcgtcgaggtcgccgacgatggccgcggcattccggtcgagatgcactcc
accggtgtgccgaccgtcgatgtcgtgatgaccgtgctgcacgcgggcggcaagttcgaa
cagggcgcctatcaggtgtccggcgggctgcacggtgtgggtgtctccgtcgtcaatgcc
ctgtcctcgcgtctcgaagccgacatcagacgagacgggtacgagtggtcgcaggtgtac
accaactcggtgcccggcgtcctcaaacagggcgagaagacgaggaagacgggcaccacc
atccgcttctgggccgatccggagatcttcgagaccaccgactacgacttcgagacggtg
gcccgccggctgcaggaaatggcattcctcaataaggggttgaccatcgagctgaccgac
gagcgcgtcaccaaagaggaagtcgtcgacgaggtggtcagcgacaccgcggaagctccg
aagtccgcagaggagaaggctgcggaaacggttggggcgcacaaggtaaagcaccgcacg
ttccactaccccggtggcctggtcgactttgtcaagcacatcaaccgcaccaagagcccg
attcagcagagcatcatcggcttcgagggtaagggcgacggccatgaggtcgaggttgcg
atgcagtggaacggtggatattccgagtcggtccataccttcgccaacaccatcaacacc
cacgagggcggcacccacgaggagggcttccgtagcgccctgacgaccgtggtgaacaag
tacgccaaagacaagaagttgttgaaggacaaagatcccaacctcaccggcgacgacatc
cgggagggcctggccgcggtcatctccgtcaaggtttcgcaaccccagttcgagggccaa
accaagaccaagctcggaaacaccgaggtcaagtcattcgtccagaaggtctgcaacgaa
cagctgacgcactggttcgaagccaaccccgcggatgcgaaggtcgttgtcaacaaagcg
gtttcgtcggcgcaggcgcggatcgcggcgcgcaaggcgcgtgagttggtgcggcgcaag
agcgcaaccgacctcggcgggctgcccggcaagcttgccgattgccgttcgaccgaccct
cgtaagtcggaactctatgtggtggaaggagattcggccggcggctcggcgaagagtggc
cgcgactcgatgttccaggccatcctcccgttgcgcggcaagatcatcaacgtggagaag
gcccgcatcgaccgggtgctgaagaacaccgaagtccaggcgatcatcaccgcgctgggc
acggggattcacgacgagttcgacctcaccaagctgcgctaccacaagatcgtgttgatg
gccgacgcggacgtcgacggccagcacatctcgaccctgctgctgacgctgttgttccgg
ttcatgcggccgctgatcgagaacgggcacgtcttcctcgcgcagccgccactgtacaag
ctcaagtggcagcgcaccgacccggaattcgcctattccgaccgcgagcgcgacggcctc
ctggaggccgggctcaaggccggcaagaagatcaacaaggaagacggcatccagcgctac
aaaggtctgggtgagatggacgcaaaagaattgtgggagaccacgatggacccgtcggtg
cgggtgctgcgccaggtcacgctggacgacgcggcggccgccgacgaactgttctccatt
ctgatgggtgaagatgtcgacgcgcggcgcagcttcatcacccgcaacgccaaggacgtt
cgcttcctggacgtctga
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