Mycobacterium saskatchewanense: MSAS_35580
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Entry
MSAS_35580 CDS
T07413
Name
(GenBank) siderophore-interacting protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
msak
Mycobacterium saskatchewanense
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msak03000
]
MSAS_35580
Transcription factors [BR:
msak03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSAS_35580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_16
HTH_50
AAA_22
HTH_30
AAA_5
AAA
HTH_29
nSTAND3
HTH_7
HTH_22
HTH_23
AAA_19
AAA_30
TsaE
ABC_tran
HTH_17
Sigma54_activat
Phage_AlpA
FliG_M
NACHT
Motif
Other DBs
NCBI-ProteinID:
BBX64384
UniProt:
A0A1X2BX28
LinkDB
All DBs
Position
3744582..3746330
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AA seq
582 aa
AA seq
DB search
MEPEPDPVAQVLRARRQFLRTGSLQEWGVREDVLHSWRRSRSLRVHPDRVELPFVRQSRT
DSELMTAAAPILRRIADDVSGQPVCVILTTAEGVVLERLGGDSALVEALDAVRLVPGYSF
AEKFAGTNGIGTTLELAQPTYIEGGEHYMAPLGRLTCAAAPIRDPSTRRIAGVVDLTGFT
DQSAPLLYALAKSAAKQIEDRMRLLARESETALLEAYLQHCRRYPHGVLAVGGDVVLMNR
QLRRTLEVNDRTALSERASEFRGSAVVGAVLTVELPSGAAARVRAVHRSPGRGGRANFVY
QVHIDVAEADSPPPVHIPHLAGTSSSWRHAAQQVDRSCREREWLVLNGEPGSGRSALARA
VAQHLRPERTVRVLSCRTMDAAQVLTELEAATVGPDFATVIADLDRTDGTALEPIADLLR
SRTGRGWLAATIGPGSPSPALEALLAVFPRTVAVPALRHRIEDLDELVPFLLHELTRGAP
VRLHPEAMSQLRKLPWPGNVGQLREVLARTVATQRSGVIVARQLPPECWSVSKHTLSRIE
ALERDAIVRGLLENGGNKAGAAEALGMSRATIYRKINEYGII
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtggagccagagccagacccggtcgcgcaggtgctgcgcgcgcgcagacaattcctgcgc
accgggtcgctgcaggagtggggcgttcgggaagacgtcctgcattcatggcgccgatcc
aggtcgttgcgggtgcacccggaccgcgtggagctgccgttcgtccggcaatccaggacc
gactccgagctgatgacggcggcggccccgatcctgcgccgcatcgccgacgatgtcagc
ggacagccggtttgcgtcatcttgacgacggcggagggcgtcgtcttggagcggctgggt
ggtgactcggcgctcgtcgaggcgctggacgcggtgcgtttggtgcccggatacagcttc
gccgagaagttcgccggcaccaacgggatcgggaccaccctggaactcgcgcagcccacc
tacatcgagggcggcgagcactacatggcgcccctcgggcggttgacctgtgccgccgcc
cccatccgtgacccttcgacgcgccggatcgccggtgtcgtcgacctcaccggcttcacc
gaccaatccgccccgctgttgtacgcgctcgccaagagcgccgccaagcagatcgaggac
cggatgaggctgttggcgcgcgagagcgaaacggctttgctcgaggcgtacctgcagcac
tgtcggcggtatccccatggtgtgctggccgtcggtggggacgtcgtcctgatgaaccgc
cagctgcgtcgaaccctggaagtcaacgatcgaacggcgttgtcggaacgggcgtcggag
ttccgcggctcggcggtcgtcggcgccgtgctgaccgtggagctgcccagtggtgccgcc
gcgcgcgtgcgggcggtgcatcggtcaccggggcggggcggccgcgccaacttcgtctat
caggtgcacatcgacgtcgccgaggccgattcgcctccgcccgtgcacatcccgcacctc
gccgggaccagcagctcctggcgtcacgccgcgcagcaggtcgaccgaagctgccgcgag
cgggaatggctggtgctcaacggagaaccgggatcgggccggtccgcgctggcccgtgcg
gtcgcccagcacctgcgacctgaacgcaccgttcgtgtgctttcctgccgcaccatggat
gccgcgcaagtgctcaccgaactcgaagcggcaaccgtgggtccggacttcgccacggtg
atcgccgatctggaccgcaccgacggtacggcgctcgagccgatcgccgacctgctgcgc
tcccgcaccgggcggggctggctggcggcgacgatcggacccgggtccccctcaccggcc
ctcgaggcgctgttggcggtcttcccgcgcaccgtcgccgtgccggcgttgcggcaccgg
atcgaggacctcgacgagttggtgcccttcctactgcacgagctgacgcgcggcgcgccc
gtgcggctgcatcccgaggcgatgtcccaattgcggaagttgccgtggcccggcaacgtc
gggcaactgcgggaggtgttggcccgcacggtcgccacacagcgctcgggcgtgatcgtg
gcgcgtcaactcccgcccgaatgctggtcggtgtccaagcacacgctctcccggatcgag
gccctggaacgcgacgcgatcgtgcgcggcctgctcgaaaacggcggcaacaaggcgggc
gccgccgaggccctcggcatgtcccgtgcgacgatctaccgcaaaatcaacgagtacggc
atcatctga
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integrated database retrieval system
