Mycobacterium saskatchewanense: MSAS_41680
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Entry
MSAS_41680 CDS
T07413
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak03018
RNA degradation
msak05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSAS_41680 (groL)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
MSAS_41680 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msak03019
]
MSAS_41680 (groL)
03110 Chaperones and folding catalysts [BR:
msak03110
]
MSAS_41680 (groL)
03029 Mitochondrial biogenesis [BR:
msak03029
]
MSAS_41680 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msak04147
]
MSAS_41680 (groL)
Enzymes [BR:
msak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSAS_41680 (groL)
Messenger RNA biogenesis [BR:
msak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSAS_41680 (groL)
Chaperones and folding catalysts [BR:
msak03110
]
Heat shock proteins
HSP60 / Chaperonin
MSAS_41680 (groL)
Mitochondrial biogenesis [BR:
msak03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSAS_41680 (groL)
Exosome [BR:
msak04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSAS_41680 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MSAS_41680 (groL)
Exosomal proteins of breast cancer cells
MSAS_41680 (groL)
Exosomal proteins of colorectal cancer cells
MSAS_41680 (groL)
Exosomal proteins of bladder cancer cells
MSAS_41680 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
Motif
Other DBs
NCBI-ProteinID:
BBX64994
LinkDB
All DBs
Position
4389297..4390976
Genome browser
AA seq
559 aa
AA seq
DB search
MATRGHPVSFPIRRNHFAMAKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKK
WGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEG
LRNVAAGANPLALKRGIEKAVEKVTETLLKSAKDVETKEQIAATAAISAGDQSIGDLIAE
AMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDAERQEAVLEDPFILLVS
SKVSTVKDLLPLLEKVIQAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDR
RKAMLQDMAILTGGQVISEEVGLSLESADVALLGKARKVVVTKDETTIVEGAGDTDAIAG
RVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAK
AAVEEGIVAGGGVALLQAAPTLDELKLTGDEATGANIVKVALEAPLKQIAFNSGLEPGVV
AEKVRNSPAGTGLNAASGEYEDLLKAGVADPVKVTRSALQNAASIAALFLTTEAVVADKP
EKAAAPAGDPTGGMGGMDF
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtggccacccgtggtcacccggtgtcattcccgatccggaggaatcacttcgcaatggcc
aagacaattgcgtacgacgaagaggcccgtcgcggcctcgagcgggggctcaacgccctc
gccgacgcggtaaaggtgacgttgggtcccaagggccgcaacgtcgtcctggagaagaag
tggggcgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgagctggag
gacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagaccgacgac
gtcgccggtgacggcacgacgacggccacggtgctggcccaggccctggtcaaggagggc
ctgcgcaacgtcgcggccggcgccaacccgctggcgctcaagcgcggcatcgagaaggcc
gtcgagaaggtcaccgagaccctgctcaagtcggccaaggacgtcgagaccaaggagcag
atcgccgcgaccgccgcgatctccgcgggcgaccagtcgatcggcgacctgatcgccgag
gcgatggacaaggtcggcaacgagggtgtcatcaccgtcgaggagtccaacaccttcggc
ctgcagcttgagctcaccgagggcatgcggttcgacaagggctacatctccggctacttc
gtcaccgacgccgagcgtcaggaagcggtcctcgaggacccgttcatcctgctggtcagc
tccaaggtgtcgaccgtcaaggacctgctcccgttgctggagaaggtcatccaggccggc
aagccgctgctgatcatcgccgaggacgtcgagggcgaagctttgagcaccctggtcgtc
aacaagatccgcggcaccttcaagtcggtggccgtcaaggcccccggcttcggcgaccgc
cgcaaggcgatgctgcaggacatggcgatcctcaccggtggtcaggtcatcagcgaggag
gtcggcctctcgctggagagcgctgacgtcgccctgctcggcaaggcgcgcaaggtcgtc
gtcaccaaggacgagaccaccatcgtcgagggcgccggtgacaccgacgccatcgccggg
cgcgtggcccagatccgccaggagatcgagaacagcgactccgactacgaccgcgagaag
ctgcaggagcgcctggccaagctggccggcggtgttgcggtgatcaaggccggggcggcc
accgaggtggagctcaaggagcgcaagcaccgcatcgaggacgcggtccgcaacgccaag
gccgccgtcgaggagggcatcgtcgccggtggcggcgtggccctgctgcaggcggctccc
acgctggacgagctgaagctcaccggcgacgaggcgaccggcgccaacatcgtcaaggtg
gcgctcgaggctccgctgaagcagatcgccttcaactccgggctggagcccggcgttgtc
gccgagaaggtccgcaactcgcccgccgggaccggcctgaacgccgccagcggtgagtac
gaggacctgctgaaggccggcgttgccgacccggtcaaggtgacgcgttcggcgctgcag
aacgcggcgtccatcgcggcgctgttcctgacgaccgaggccgtcgtcgccgacaagccg
gaaaaggcggccgctcccgcgggcgacccgaccggtggcatgggcggcatggacttctag
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