Mycobacterium saskatchewanense: MSAS_45750
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Entry
MSAS_45750 CDS
T07413
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak00521
Streptomycin biosynthesis
msak00523
Polyketide sugar unit biosynthesis
msak00541
Biosynthesis of various nucleotide sugars
msak01100
Metabolic pathways
msak01110
Biosynthesis of secondary metabolites
msak01250
Biosynthesis of nucleotide sugars
Module
msak_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MSAS_45750 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MSAS_45750 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MSAS_45750 (rmlC)
Enzymes [BR:
msak01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
MSAS_45750 (rmlC)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
BBX65401
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All DBs
Position
complement(4797915..4798523)
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AA seq
202 aa
AA seq
DB search
MKARELSIPGAWEITPAIHGDSRGLFFEWLTDRGFSAFAGHRLDVRQANCSVSSAGVLRG
LHFAQLPPSQAKYVTCVSGSVFDVVVDIRVGSPTFGRWDSVLLDDRDHRTIYISEGLAHG
FLALQDNSTVMYLCSAEYSPQREHTICATDPELAVDWPLVDGAAPSLSDRDAAAPSFAEA
RASGLLPTWEETQTFIGGMRDS
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcccgcgagctcagcatccccggcgcatgggagatcacgcccgccatccatggt
gattcccgcggcctgttcttcgaatggctcaccgatcgcgggttcagcgccttcgccggt
catcgcctcgacgtccgccaagccaactgctcggtctcctcggccggggtgttgcgcggc
ctgcacttcgcccagttgccgccgagccaggccaagtacgtcacctgcgtgtccggctcg
gtgttcgacgtcgtcgtcgacatcagggtggggtcgcccaccttcggccggtgggactcg
gtcctgctcgacgaccgcgaccaccgcaccatctacatctccgagggactggcgcacgga
ttccttgcgttgcaagacaattcgacggtgatgtacctgtgctcggcggagtacagcccg
caacgcgagcacaccatctgcgcgacggatccggaactggcggtcgactggccgctggtg
gacggcgccgcgcccagcctgtccgaccgggatgccgcggccccgagtttcgccgaagcg
cgcgcctccggcctgctgccgacctgggaagaaacgcagacgttcatcggcggaatgcgc
gactcgtaa
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