Mycobacterium saskatchewanense: MSAS_46210
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Entry
MSAS_46210 CDS
T07413
Symbol
groEL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak03018
RNA degradation
msak05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSAS_46210 (groEL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
MSAS_46210 (groEL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msak03019
]
MSAS_46210 (groEL1)
03110 Chaperones and folding catalysts [BR:
msak03110
]
MSAS_46210 (groEL1)
03029 Mitochondrial biogenesis [BR:
msak03029
]
MSAS_46210 (groEL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msak04147
]
MSAS_46210 (groEL1)
Enzymes [BR:
msak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSAS_46210 (groEL1)
Messenger RNA biogenesis [BR:
msak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSAS_46210 (groEL1)
Chaperones and folding catalysts [BR:
msak03110
]
Heat shock proteins
HSP60 / Chaperonin
MSAS_46210 (groEL1)
Mitochondrial biogenesis [BR:
msak03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSAS_46210 (groEL1)
Exosome [BR:
msak04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSAS_46210 (groEL1)
Exosomal proteins of other body fluids (saliva and urine)
MSAS_46210 (groEL1)
Exosomal proteins of breast cancer cells
MSAS_46210 (groEL1)
Exosomal proteins of colorectal cancer cells
MSAS_46210 (groEL1)
Exosomal proteins of bladder cancer cells
MSAS_46210 (groEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
BBX65447
LinkDB
All DBs
Position
4843044..4844666
Genome browser
AA seq
540 aa
AA seq
DB search
MSKVIEYDETARRAMEAGVNKLADAVRVTLGPHGRHVVLAKAFGGPTVTNDGVTVAREIE
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQALVKGGLRLVAAGVNPIELGSGIS
KAADAVSEALLAAATPVSGKDAIAQVATVSSRDARLGELVGEAMNKVGADGVVSIEESST
LSTELEFTEGVGFDKGFLSAYFVTDFDSQEAVLDDPLILLHQDKISSLPDLLPILEKVAE
AGKPLVIIAEDVEGEALATLVVNSIRKTLRAVAVKAPFFGDRRKAFLQDLAIVTGGEVVN
PDTGLLLREVGLEVLGSARRVVVSKDDTIVVDGGGSAEAVANRIKQLRAEIEASDSDWDR
EKLQERLAKLAGGVAVIKVGAATETALKERKESVEDAVSAAKAAVEEGIVSGGGAALIQA
RKALKDLRGSLSEDEGLGVDVFSEALGAPLYWIATNAGLDGSVVLNKVSELPAGQGLNAE
TLTYGDLVAEGVIDPVKVTRSAVVNAASVARMVLTTETAIVEKPAEAEDDHGHGHGHHHH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggttattgagtacgacgaaaccgcgcgccgcgcgatggaggcgggcgtcaac
aagctcgccgacgcggtccgcgtgaccctggggccgcacggccgccacgtggtgctggcc
aaggctttcggcggtcccacggtgaccaacgacggcgtcaccgtcgcccgcgagatcgaa
ctggaggacccgttcgagaacctgggcgcccagctggtgaagtcggtcgccaccaagacc
aacgacgtggcgggcgacggcaccacgacggcgacggtgcttgcgcaggcgctggtgaag
ggcggcctgcggctcgtcgccgccggcgtcaacccgatcgagcttggctcaggcatcagc
aaggccgccgacgcggtatccgaggcgctgctggcggcggccaccccggtgtccggcaag
gacgcgatcgcccaggtggcgaccgtctcgtcgcgcgacgcgcggctgggcgagctggtc
ggcgaggcgatgaacaaggtcggcgccgacggcgtggtcagcatcgaggagtcctcgacc
ctgagcaccgagctggagttcaccgagggcgtcgggttcgacaagggcttcctgtcggcc
tacttcgtcaccgacttcgactcccaggaggcggtcctcgacgatccgctgatcctgctg
caccaggacaagatcagctcgctgcccgacctgttgccgatcctggagaaggtcgccgag
gccggcaagccgttggtgatcatcgccgaggacgtcgagggcgaggcgctggcgacgctg
gtcgtcaactccattcgcaagacgctgcgggcggtcgccgtcaaggcgccgttcttcggc
gaccggcgcaaggccttcctgcaagacctggcgatcgtgacgggcggcgaggtggtcaac
cccgacaccggcctgctgctgcgcgaggtcggtctcgaggtgctcggctcggcgcggcgc
gtcgtggtcagcaaggacgacacgatcgtggtcgacggcggcggctcggccgaggcggtc
gccaaccgcatcaagcagctgcgcgccgagatcgaggcgagcgactccgactgggaccgc
gagaagctgcaggagcggttggccaagctcgccggcggcgtggccgtcatcaaggtcggc
gcggccaccgagaccgcgctcaaggagcgtaaggaaagcgtcgaggacgccgtctcggcc
gcgaaggccgccgtcgaggagggcatcgtctcgggtgggggcgccgcgctcatccaggcc
cgcaaggccctgaaggacctacgcggctcgctgtccgaagacgaggggctcggcgtcgac
gtgttctccgaggcgttgggggcgccgctgtactggatcgccaccaacgccgggctcgac
gggtcggtcgtgctgaacaaggtctcggagttgcctgcgggacaagggctcaacgccgag
acgctcacctacggcgacctggtggccgaaggcgtcatcgacccggtcaaggtgacccgg
tcggcggtggtcaacgccgcctcggtggcgcgcatggtgctcaccaccgagaccgcaatt
gtcgagaagccggcggaagcagaggacgaccacggtcacgggcatggccaccaccaccac
taa
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