Mycobacterium saskatchewanense: MSAS_48220
Help
Entry
MSAS_48220 CDS
T07413
Name
(GenBank) hypothetical protein
Organism
msak
Mycobacterium saskatchewanense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
nSTAND1
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
PD40
TIR_2
Ge1_WD40
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Nbas_N
Cytochrom_D1
AAA_29
AAA_21
TIR
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BBX65648
LinkDB
All DBs
Position
complement(5114883..5118011)
Genome browser
AA seq
1042 aa
AA seq
DB search
MPRIFLSHSSKDNTEAAALRQWLIDQRPELVSEIFLDIAEDSGLAPGRRWKDALRQANER
CEAVICLVSHAWGSSPECKTEYRTAETLGKQILVARLEDTGDSDITAEWQRCDLFAPGPT
TEITTAAGAPVLFNAASLDQLKKAIEGTGIGPENFVWPPRRDPDRAPYRGWEPFEDIDAG
VFFGRNAAIMHGTDELRKMRFAGVKSLFVVLGPSGSGKSSFLRAGLIPRLQRDDRNFAVL
GIVRPGRNALTGESGLAAAIHTARRELGLAGAPTFGEIKTICREPDVGRVCELLLEIRDA
AAARLAYKANAKHQAPTLVLPLDQAEELFSAESVSAQTAQEAARFLELVAAVIARINTDD
GRLIVAATIRTDRYEAMQSHPALDGIGTDLFNDLKTMPQHHFPGVIRGPAARASEAGDHL
AIADDLVDRLVTDAGGGADTLPLLALTLQRLYTDYGTAEEITSDHYQAMGGMPNVVNNQI
EDILSADPRDRDTALELLRSAFIPWLASINPDNDKALRRVALESELPAESRSLIDAFVEK
RLLVRDRRGSEVVVEVALESLLRQWDELSHWLEDERQNLAAATDLERSAAAWDRHGRDES
WLLGGSRLAAAEKVAVRPGFAERLAAAAEYLAASRHCEEDKLEIERRRHYDAVARRLVIE
AKAMMAQTIPGGDAGAFQQLLAARAIASEPDNVPIAEALALRPGTLKIMDAGKPLLGLAI
RPDGQRIAGAGDDALIRIWDAVTGQPVGRPLAGHDVRVQGVAFSPDGRWLGSAGGDRTVR
VWDAETGEPVGRPLTGHAGVVYGVAFSRDGRWVASAGDDRTVRVWDVATGEPIGDPLTGH
AGIVYSVAFSPDGLLASGGGDRTVRVWDPVSGCAVGNALTGHGETVWVVAFSPDGRRLAS
GSRDQTVRFWDPLSGEPLGDPLAGHTDVVRDVSFSPDGQRLATASYDGTLRIWEGATSET
LRGHTDAVYGVAFSPDGRRLASCSQDGTSRLWCASDVRDDPPPDAAEAMCAILTTNMSKE
QWPVWVSPDIEYIPACPDLPIP
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggatcttcctgagccattccagcaaggacaacaccgaggcggcggcgctacgc
caatggctgatcgatcagcgccccgagctggtgagcgagattttcctcgatatcgccgaa
gactcgggtctggcgccgggccggcggtggaaggacgcgctgcgccaggccaacgagcgc
tgcgaggccgtcatctgcctcgtatcccatgcctggggaagctcacccgagtgcaagacc
gaataccgcaccgccgagacgctgggcaagcagatcctcgtcgcgcgactcgaggacacc
ggcgactcggacatcaccgccgagtggcagcgctgcgacctgttcgcgcccggcccgacg
accgagatcacgaccgcggcgggtgctccggtgctgttcaacgccgcgtcgctcgaccag
ctcaagaaggcgatcgagggcaccgggatcgggccggagaacttcgtctggccgccgcgc
agggaccccgaccgcgccccgtatcgcggctgggaacccttcgaagacatcgacgcaggc
gtgttcttcgggcgcaacgccgcgatcatgcacggcaccgacgagctgcgcaagatgcgc
ttcgccggcgtcaagtcgttgttcgtcgtcctgggcccctcgggcagcggcaagtcgtcg
ttcctccgcgcggggctgatcccccgcctgcagcgtgacgaccgcaacttcgcggtgctg
ggcatcgtgcgcccgggacgcaacgcgctcaccggtgagagcggtctggccgcggcgatt
cacacggcgcgccgggagctgggcctggccggcgccccgacgttcggcgagatcaagacg
atctgccgcgagccggacgtgggtcgggtctgcgagctgttgctcgagatacgcgacgcc
gccgccgcgcggctggcctacaaagccaacgccaaacaccaggcgccgacgctggtgctg
ccgctggatcaggcggaggaactcttctcggccgaatccgtgtccgcacagaccgcgcag
gaggcggcacgcttcctcgagctggtggccgccgtgatcgcccgcatcaacaccgacgac
ggccggctcatcgtcgcggccaccatccgcaccgaccgctacgaggcgatgcagagccat
ccggccctcgacggcatcggcaccgacctgttcaacgacctcaaaacgatgccgcagcac
cactttccgggcgtcatccggggtcccgccgcccgggcgtccgaggcgggcgatcacctc
gccatcgccgatgacctggtcgatcggctggtcaccgacgccggcgggggtgccgacacg
ttgcccctgctggcgctcaccctgcagcggctctacaccgattacggcaccgccgaggag
atcacctccgaccattaccaagcgatgggcgggatgcccaacgtcgtcaacaaccagatc
gaagacatcttgtcggccgacccccgcgatcgcgacaccgctctggagttgctgcgttcg
gcgttcatcccctggcttgcctcgatcaaccccgacaacgacaaagcgctgcgccgggtg
gcgttggagtccgagttgcccgccgaaagccgttccctgatcgacgcattcgtggagaag
cggctgcttgttcgcgaccgccggggcagcgaggtggttgtggaagtcgcgctggaaagc
ctgctgcgccaatgggacgagctgtcccactggctggaggacgagcgccagaacctcgcg
gccgcaaccgatctcgagcgatcggctgccgcatgggaccggcacggacgcgacgaatcc
tggctgctgggcggatcgcggctcgcggcggccgaaaaggtggccgttaggccaggtttc
gccgagcggctcgccgccgcggccgagtacctcgccgcctcccggcattgcgaggaggac
aaactcgagatcgagcggcgccgccactacgacgcggtcgcgcgccggctcgtcatcgag
gcgaaagcgatgatggcgcagaccatcccgggcggtgatgccggcgccttccaacagctg
ctcgctgcccgcgccatcgcctcggagcccgacaacgtcccgatcgccgaggcgctggcg
ctgcggcccgggacgctgaagatcatggatgccggcaagccgttgctgggcctggcgatc
cggcccgacggacagcgcatcgccggcgccggcgacgacgcactgatacggatctgggac
gcggtcaccggccagccggtcggccggccgctggccggccacgacgtgcgggtgcagggt
gtggcgttcagtccggacgggcgctggctgggaagtgcgggcggtgaccggacggtgcgc
gtgtgggacgcggaaaccggcgagccggtcggccggccgctgaccggccacgccggcgtc
gtgtacggcgtcgcattcagccgcgacggacgatgggtggccagcgcaggcgacgaccgg
acggtgcgggtctgggacgtggcgaccggtgagcccatcggcgacccgctgaccggccac
gccggcatcgtctacagcgtcgcattcagccccgacgggctgctggccagcggtggcggg
gaccggacggtgcgggtctgggacccggtcagcggctgcgcggttggcaacgccctgacc
gggcacggcgaaacggtgtgggtggtggcgttcagccccgacggccgacggctggcgagt
gggagccgcgaccagacggtgcgcttctgggatccgctcagcggcgagccgctcggagac
ccgctcgccgggcacaccgacgttgtgcgcgatgtgtcgttcagtcccgacgggcagcgc
ctggccaccgccagctacgacggcacgctgcgcatctgggagggggccaccagcgagacg
ctgcgcgggcacaccgacgcggtgtacggtgtggcgttcagcccggacggccggcgcctg
gcctcgtgcagccaggacggcacctcgcggctgtggtgcgcctccgacgtgcgcgacgac
ccgcccccggacgccgccgaggcgatgtgcgccatattgaccaccaacatgagcaaagag
caatggcccgtctgggtttcgccggacatcgagtacatcccggcttgcccggacctgccc
atcccctag
DBGET
integrated database retrieval system