Mycobacterium saskatchewanense: MSAS_50160
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Entry
MSAS_50160 CDS
T07413
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak00521
Streptomycin biosynthesis
msak00523
Polyketide sugar unit biosynthesis
msak00525
Acarbose and validamycin biosynthesis
msak00541
Biosynthesis of various nucleotide sugars
msak01100
Metabolic pathways
msak01110
Biosynthesis of secondary metabolites
msak01250
Biosynthesis of nucleotide sugars
Module
msak_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MSAS_50160 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MSAS_50160 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
MSAS_50160 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MSAS_50160 (rfbB)
00525 Acarbose and validamycin biosynthesis
MSAS_50160 (rfbB)
Enzymes [BR:
msak01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
MSAS_50160 (rfbB)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
KR
Motif
Other DBs
NCBI-ProteinID:
BBX65842
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Position
complement(5319962..5320963)
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AA seq
333 aa
AA seq
DB search
MRSVSRVLVTGGAGFLGAHLCGRLLDAGAEVVSVDDLSTSPPGAATRLTRRAGYHFVQHD
ICDPGVIGLVGADFDTVFHLASPASPIDYQRLPLATLRAGSAGTETALQIAERDGARLVL
ASTSEVYGDPEQHPQPETYWGNVNPVGPRSVYDEAKRYAEALAFAYRRLGRVDVGVARIF
NTYGPGMRADDGRMVPTFCRQALRGEPMTVAGSGLQTRSLCFVDDTVAGLMALARTDFSG
PVNIGNPMELTVLAAAELIRDLAGSKSTIRLTPPAEDDPQRRCPDITLAREQLGWQPRVD
YRTGLATTVAWFRTTVADEPGPGLSRAPQQLAQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcgttccgtctcgcgtgtcctggtcaccgggggcgccggtttcctgggagctcaccta
tgtgggcggctgctcgacgccggcgccgaggtggtcagcgtcgacgacctgtccaccagc
ccgccgggcgcggcgacccggctgacccggcgcgccgggtatcactttgtgcagcacgac
atctgcgatcccggcgtgatcggactggtgggtgccgacttcgacaccgtgttccatctg
gcttcgccggcctcgccgatcgactaccagaggttgccgctggcgaccctgcgcgccgga
tcggccggcaccgagacggcgctgcagatcgccgaacgggacggggcccgcctggtgctg
gcctccaccagtgaggtctacggcgatcccgagcagcacccgcaaccggaaacgtactgg
ggcaacgtcaatcccgtcggcccgcgcagtgtgtacgacgaggccaagcggtatgcggag
gccttggcgttcgcctatcgccgactcggccgggtcgacgtcggggtggcgcgcatcttc
aacacctacgggccgggcatgcgcgccgacgacggccgcatggtcccgacgttttgccgc
caggcgctgcggggcgaaccgatgacggtggcgggcagcggcctgcagacgcgttccctg
tgcttcgtcgacgacaccgtcgcgggcctgatggcgttggcgcgcaccgacttcagcggc
cccgtcaacatcggtaacccgatggaactcacggtgctggccgcggccgagttgatccgg
gacctggcgggcagcaagtcgacgatccggctcaccccgccggccgaggacgacccgcag
cgccgctgccccgacatcacgctggcccgcgagcagctgggctggcagccgcgtgtcgac
taccgcacgggcctcgccaccaccgtcgcgtggttccgcaccacggtggccgacgaaccc
gggccaggcctctcccgggccccccagcaactggcgcagtag
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