Mycobacterium saskatchewanense: MSAS_50180
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Entry
MSAS_50180 CDS
T07413
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msak
Mycobacterium saskatchewanense
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msak03032
]
MSAS_50180
03400 DNA repair and recombination proteins [BR:
msak03400
]
MSAS_50180
Enzymes [BR:
msak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MSAS_50180
DNA replication proteins [BR:
msak03032
]
Prokaryotic type
DNA Topoisomerases
MSAS_50180
DNA repair and recombination proteins [BR:
msak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MSAS_50180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BBX65844
LinkDB
All DBs
Position
complement(5321435..5322490)
Genome browser
AA seq
351 aa
AA seq
DB search
MRLRRSDLTKPGIARKRRGKHFAYYGPDGALLSDPQALQRIKELVIPPAWKKVWISPYPN
DHIQAVGTDAAGRRQYIYHTAWQQERAEEKFDRVLELSTRLPEWRAALAKDLSRNGLTRN
RVLAVALRILDRGYFRAGGEQYAEEHESYGMATMLCEHVTVRRNAVGFDFPGKSGVRRCV
EIEDTEVVRAVRALMRRPNRTERLLVCRTSSGWVDLRSDDLNARFKELVGDEYTVKDLRT
WHGTVLAATAFADADPAVSQRVAKRVESAVMKEVAEGLGNTPAVARGSYVDPRVVAGYEQ
GLTIAAAARRAERTPEPDAAQETLEKATRLLIRRVAKGHSGSGGSTLAKSA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcgtcgcagcgacctcaccaagccggggatcgcgcgcaagcgtcgcgggaag
cactttgcctactacggccccgacggggctctgttgtccgatccccaagccctgcagcgg
atcaaggagctggtcatcccgccggcgtggaagaaggtctggatctccccgtatccgaac
gatcacatccaggcggtgggaaccgacgccgcgggtcggcgccagtacatttatcacacg
gcgtggcagcaggaacgggccgaggagaagttcgaccgcgtgctggaactgtccacccgg
ttgcccgaatggcgggccgccctcgccaaagaccttagccgcaacggcttaacgcggaac
cgagtgctcgccgtcgcgttgcgcatcctcgatcgaggatacttccgcgccggcggggag
cagtacgccgaggaacacgagtcctacgggatggccaccatgctctgcgagcacgtgacg
gtccggcgcaacgccgtcggtttcgactttcccggcaagagcggcgtgcgcaggtgcgtc
gagatcgaggacaccgaagtcgtccgggccgtgcgagcgttgatgcgccgccccaatcgg
accgagcgactgctggtgtgccgcacctcctccggatgggtcgaccttcgctccgacgac
ctcaacgcccgattcaaggagctggtcggcgacgagtacacggtcaaggacctgcgcacc
tggcacggtacggtgctggccgccacggcgttcgccgacgccgaccccgccgtgtcgcaa
cgggtcgccaagcgcgtcgagtcggccgtgatgaaggaggtcgccgaggggctgggcaac
acgccggccgtcgcgcggggatcctacgtggatccccgggtcgtcgccggctacgagcag
gggctgaccatcgccgccgcggcccggcgcgccgaacgcaccccagagcccgacgcggcg
caggaaacgctggagaaggccacccggctgctgatccgacgggtggccaagggccacagc
ggatccggcggttccacgttggccaagagtgcgtga
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