Mycobacterium saskatchewanense: MSAS_53640
Help
Entry
MSAS_53640 CDS
T07413
Symbol
fpg1
Name
(GenBank) formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSAS_53640 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msak03400
]
MSAS_53640 (fpg1)
Enzymes [BR:
msak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MSAS_53640 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MSAS_53640 (fpg1)
DNA repair and recombination proteins [BR:
msak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSAS_53640 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BBX66190
LinkDB
All DBs
Position
5662758..5663618
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLQARVVGRTITAVRVHHPRAVRRHEAGPADLTARLLDARIAGTGRRG
KYLWLLLDGPDQPDTALVVHLGMSGQMLLGQVPRADHVRISALLDDGTVLSFADQRTFGG
WMLADLVSVDGSVVPTPVAHLARDPLDPLFDREAVVNVLRRKHSEIKRQLLDQTVVSGIG
NIYADEALWRAKVHGARIAAELSRRKLGAILDAAADVMRDALAQGGTSFDSLYINVNGES
GYFDRSLDAYGRAGQSCRRCGAVMRREKFMNRSSFYCPKCQPRPRV
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgaggtggtccgccgcggcttacaggcccgagtggtgggc
aggacaatcaccgccgtccgggtgcaccatccccgcgcggtgcgccggcacgaggccggg
cccgccgacctgaccgcccggctgctcgacgcccggatcgccggcaccggccggcgcggc
aagtacctgtggctgctgctcgacggtcccgaccagccggacacggcgctcgtcgtacac
ctcggcatgagcgggcagatgctgcttgggcaggtaccgcgcgccgaccacgtgcgtatc
tccgcgctgctcgacgatgggaccgtgctgagcttcgccgaccaacgcaccttcggcggg
tggatgcttgccgacctcgtgagtgtcgacggcagcgtggtcccgacccccgtcgcgcac
ctcgctcgcgacccgctggacccgctcttcgaccgcgaggcagtggtgaatgtgttgcgg
cgcaagcattctgagatcaagcgacagctcctcgatcagaccgtggtctcgggcatcggc
aacatctacgcggacgaggcgttgtggcgggccaaggtccacggcgcccggattgccgcg
gagttgagccgccgcaagctgggcgcgattctggacgccgccgccgacgtgatgcgcgac
gcgctcgcgcagggcgggacgtcgttcgactcgctctatatcaacgtcaacggggaatcg
ggctacttcgaccggtccctggatgcttacggccgtgcggggcagagctgccggcgctgc
ggcgccgtcatgcggcgggagaagttcatgaatcgctcgtcgttctactgcccgaaatgc
caaccccgtccgcgcgtttga
DBGET
integrated database retrieval system
