Mycobacterium saskatchewanense: MSAS_55060
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Entry
MSAS_55060 CDS
T07413
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msak
Mycobacterium saskatchewanense
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msak03016
]
MSAS_55060 (truB)
Enzymes [BR:
msak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MSAS_55060 (truB)
Transfer RNA biogenesis [BR:
msak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MSAS_55060 (truB)
Prokaryotic type
MSAS_55060 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BBX66332
LinkDB
All DBs
Position
5806802..5807722
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AA seq
306 aa
AA seq
DB search
MSSAPPGAGPVAGLVVVDKPAGMTSHDVVARCRRIFGTRKVGHAGTLDPMATGVLVVGVE
RATKILGLLTASAKSYAATIRLGQSTSTEDAEGEVLQTVSARHLTSEDIAAAVAGLRGDI
EQVPSAVSAIKIGGRRAYRLAREGQDVELKARPVRIDRFDVLDVRSHGELVDVDVEVDCS
SGTYIRALARDVGAALGVGGHLTALRRTRVGRFVLDEARSLEELSERPRLTHTLDEACLL
MFPRRDLTGEEAEAVGHGRPLSPAGIDGIYAAADADGRVIALLRDEGAGTRSVVVVRPAT
MRNGTF
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgcgccgccgggcgccggaccggtcgccggactggtcgtggtcgacaaaccg
gccggcatgaccagtcacgacgtggtcgcgcggtgccgtcgcatcttcggcacccgcaag
gtgggccacgccggcacgctcgacccgatggccaccggcgtgttggtggtcggcgtcgag
cgggccaccaagatcctcggtttgctgacggcgtcggccaagtcgtatgccgccaccatc
cggctgggtcagagcacgtccaccgaggacgcggaaggcgaagtcctgcagaccgtttcg
gcccggcacttgacgagcgaggacatcgcggccgcggtggccgggctgcgcggcgacatc
gagcaggtgccgtcggcggtgagcgccatcaagatcggcggccggcgggcctatcggctg
gcgcgcgagggtcaggacgtcgagctgaaggctcgtccggtgcgcatcgaccggttcgac
gtgctcgacgtccggtcccacggcgagttggtcgacgtcgatgtcgaggtggactgttcg
tccggaacctatattcgcgcgctggcccgcgacgtcggcgccgccctcggcgtgggcggg
cacctgaccgccttgcggcgcacccgggtcggccggttcgtcctggacgaggcccgctcc
ctggaggagctttcggagcggccgcggctgacccacaccctggacgaggcgtgcctgctg
atgtttccgcgccgcgacctcacgggcgaggaggccgaggccgttggccacggccggccg
ctgtcaccggcggggatcgacggcatctatgccgccgccgacgcggacggccgggtgatc
gcactgctgcgcgacgagggggcggggaccaggtcggtggtggtggtccgcccggcgacg
atgcggaacgggacgttctga
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integrated database retrieval system
