Mycobacterium saskatchewanense: MSAS_55130
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Entry
MSAS_55130 CDS
T07413
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSAS_55130 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msak03019
]
MSAS_55130 (pnp)
03016 Transfer RNA biogenesis [BR:
msak03016
]
MSAS_55130 (pnp)
Enzymes [BR:
msak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MSAS_55130 (pnp)
Messenger RNA biogenesis [BR:
msak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MSAS_55130 (pnp)
Transfer RNA biogenesis [BR:
msak03016
]
Prokaryotic type
tRNA degradation factors
MSAS_55130 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_NusA_1st
KH_PNO1_2nd
DUF2017
KH_KhpA-B
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BBX66339
LinkDB
All DBs
Position
5814111..5816357
Genome browser
AA seq
748 aa
AA seq
DB search
MFESTATIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDENMLLSATTASKSPKEHFDFF
PLTIDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVSGLRNEIQVVVTI
LSLNPNDLYDVLAINAASASTQISGLPFSGPVGGVRVALIDGTWVAFPTVEQLERAVFDM
VVAGRIVGEHDGTADVAIMMVEAEATENVIELVEGGAQAPTESVVAEGLEAAKPFIATLC
KAQQELADKAAKPTGDYPVFPDYGDDVYYSVASVATDELAQALTIPGKAERNGRTEEIRA
EVLARLAETYSGREKEVSAAFRSLTKKLVRQRILTDHFRIDGRGITDIRALSAEVAVVPR
AHGSALFERGETQILGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPFSTGETGRVGSP
KRREIGHGALAERALIPVLPGVEEFPYAIRQVSEALGSNGSTSMGSVCASTLALLNAGVP
LKAPVAGIAMGLVSDDVEIDGKTERRFVTLTDILGAEDAFGDMDFKCAGTKDFVTALQLD
TKLDGIPSQVLAGALSQAKDARLTILEVMAEAIDAPDEMSPYAPRVTTIKVPIDKIGEVI
GPKGKVINAITEETGAQISIEDDGTVFVGATDGPSAQAAIDKINAIANPQLPTVGERFLG
TVVKTTDFGAFVSLLPGRDGLVHISKLGRGKRIAKVEDVVNVGDKLRVEIADIDKRGKIS
LVLVDEDATSDSTAPAPPAPADAATASS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatcgaccgccactatcgacaacgggagctttggcacccgcaccatccgattc
gagaccggccggttggcccagcaggccgccggtgccgtcgtcgcctacctcgacgacgag
aacatgctgttgtcggcgaccaccgccagcaagagccccaaggagcacttcgacttcttc
ccgctgaccatcgacgtcgaggagcggatgtatgccgcgggccgcatccccggttcgttc
tttcgccgtgagggccggccgtccaccgacgccatcctgacctgccggctcatcgaccgc
ccgctgcggccgtcgttcgtcagtgggctgcgcaacgagattcaggtcgtcgtgacgatc
ctgagcctgaaccccaacgacctctacgacgtgctggccatcaacgccgcgtcggcgtcc
acccagatctccgggctgccgttctccggccccgtcgggggtgtgcgcgtcgcgctgatc
gacggcacctgggtcgccttccccacggtcgagcagctcgagcgggccgtgttcgacatg
gtggtggcgggccgcatcgtcggcgagcatgacggcacggcggacgtcgccatcatgatg
gtcgaggccgaagccaccgagaatgtcatcgagctcgtcgaggggggcgcgcaggcgccg
acggaaagcgttgtggccgaaggcctggaggcggcgaagccgttcatcgcgaccctgtgc
aaggctcagcaggagctggccgacaaggccgccaagcccaccggcgactacccggtgttc
cccgactacggcgacgacgtgtactactcggtcgcctcggtggcgacagacgaactggcc
caggcgttgacgattccgggcaaggccgagcgcaacggccgcaccgaggagatccgggcc
gaagtcctggcgcggcttgccgagacctactccggccgggagaaagaggtcagcgccgcc
ttccgctcgctgaccaagaagctggtccgccagcgcatcctgaccgaccacttccgcatc
gacggccgcggcatcaccgacatccgcgcgctgtcggccgaggtggccgtcgtcccgcgg
gcgcacggcagcgcgctgttcgagcggggcgagacccagatcctgggtgtcaccacgctg
gacatggtcaagatggcccagcagatcgactcgttgggaccggagacgtccaagcggtac
atgcaccactacaacttcccgccgttctccaccggagagaccggccgggtcggctcgccc
aagcggcgcgagatcgggcacggcgcgctggccgagcgtgcgctgatcccggtgctgccc
ggcgtcgaggaattcccgtacgccatccgccaggtgtccgaggcgctgggctccaacggc
tcgacgtcgatgggttccgtgtgcgcctccacgctggccctgctcaatgccggggtgccg
ctcaaggcgccggtcgccggcatcgcgatggggttggtctccgacgacgtcgagatcgac
ggcaagaccgagcggcgtttcgtgaccctgaccgacatcctcggtgccgaggacgcgttc
ggcgacatggacttcaagtgcgcgggcaccaaggacttcgtgaccgccctgcagctggac
accaagctcgacgggattccgtcgcaggtgctcgcgggcgcgctgtcccaggccaaggat
gcgcgcctgacgatcctcgaggtaatggccgaggccatcgacgcgcccgacgaaatgagt
ccgtacgctccgcgggtgaccacgatcaaggtcccgatcgacaagatcggcgaggtcatc
ggccccaagggcaaggtcatcaacgccatcaccgaggagaccggcgcgcagatctcgatc
gaggacgacggcaccgtgttcgtcggcgccaccgacgggccctcggcgcaggccgcgatc
gacaagatcaacgcgatcgccaacccgcagctgccgaccgtcggcgagcggttcctcgga
accgtggtcaagacaacggatttcggcgcgttcgtgtcgctgctgccgggtcgcgacggc
ttggtgcacatctccaagctcggccgaggcaagcggatcgcgaaggtcgaggacgtcgtc
aacgtcggcgacaagctgcgggtcgagatcgccgacatcgacaagcggggcaagatctcc
ctggtcctcgtggacgaagacgccacctcggacagcaccgcccccgcgcccccagcgccg
gccgatgccgcgacagccagcagctga
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integrated database retrieval system
