Mycobacteroides salmoniphilum: DSM43276_00193
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Entry
DSM43276_00193 CDS
T06041
Symbol
csd_1
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
msal
Mycobacteroides salmoniphilum
Pathway
msal00450
Selenocompound metabolism
msal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msal00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DSM43276_00193 (csd_1)
Enzymes [BR:
msal01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
DSM43276_00193 (csd_1)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
DSM43276_00193 (csd_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QCH21963
LinkDB
All DBs
Position
complement(194640..196511)
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AA seq
623 aa
AA seq
DB search
MSTSDAIPVTDSPPGFPSAAELSALATQLFWEATPSGAPGIDTPGPAVPVAPRGTVPDAT
AGSSAAATAGSLASPYAPAPLADALSTATVAPPVAAFGSATPDGVPGAVPVAPRGGGGDL
TSGTSAAHAATTGYPTTGLADFAVPSGLVPTIPGVLATPVIAPAAASPRVAPYSEAPGVP
DLGWTTPVAPAGGDEANYYFLGGAPAAAPIHEDARAFDVASIRADFPILSETVNGKPLIW
FDNAATTQKPQSVIDRLVHFYQHENSNIHRAAHELAARATDAYEDARGAVRKFLGAEADE
NIIFVRGATEAINLVAHAWGGKNLGHGDEIVITHLEHHANIVPWQQIAKKTGAVIKVAPV
DDSGNLLLSELEDLVGPRTKLVAATQVSNALGTVTPAKQIVEIAHRYGARVLIDGAQSVP
HLTVNLQELGADFFVFSGHKIYGPTGIGVLYGSEDALAETPPWQGGGNMIADVTLERAVF
QGPPNKFEAGTGNIADAVGLGEALRYVERIGIDRIAEYEHALLEYATPQLAAIPGVRLVG
TADHKASVLSFVLDGHEPVEVGKALNADGIAVRAGHHCAQPILRRLGLEQTVRPSFAFYN
TFDEIDVFIDAVRRLAESGGPKA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaagtgacgcgatcccggtaaccgacagcccacctggattcccgtctgcggcg
gagctgtcggcgttggccactcagctgttctgggaggcaacgccttcgggagctccgggc
atcgataccccgggaccggcggtacccgtcgcgccccggggcaccgtcccggacgcgacc
gcggggtcgtccgcggcagccacggcgggctcgttggccagtccgtacgcaccggcaccg
ctggcggacgccttatcgacggcaacggtggctccacctgtcgcggccttcggttcggcg
acccccgacggtgttcccggagcggtgccggtggctccgcggggtggcggcggtgacctg
acatcgggcacctctgccgcacacgccgccacaacgggttatccgacaacaggtctcgcc
gatttcgccgtcccctcggggctggttccgacgatccccggggtgctcgccacccccgtc
atcgcaccagcggccgcctcacctcgcgtggctccgtactcggaggcaccgggggtaccc
gacctcgggtggacgaccccggtggcgccggccggaggcgatgaggcgaactactacttc
ttgggcggggcgcctgctgcggcaccgatccacgaggacgcgcgcgccttcgatgtcgcc
tcgattcgggcggatttcccgatcctgtccgagaccgtcaacggtaagccgctgatctgg
ttcgacaatgccgcgaccactcagaagccgcagtcggtgatcgatcggctggtgcacttc
tatcagcacgagaactccaatatccaccgtgccgcacacgaattggcggcacgggccacc
gacgcgtacgaggatgcacgcggcgccgtccgcaagttcctcggcgccgaggcggacgag
aacatcatctttgtccgcggggccaccgaagccatcaacctggtggcgcacgcctggggc
ggcaagaacctcgggcacggggatgagatcgtcatcacccacctggagcaccacgccaat
atcgttccgtggcagcagatcgcgaagaagaccggcgccgtcatcaaggtggccccggtg
gatgactccggcaacctgctgctgtccgagctggaagacctggtcggaccgcgcaccaaa
ctggtggcggccacccaggtttccaatgcattgggcacggtgacgcccgccaagcagatc
gtcgagatcgcgcaccgctacggcgctcgcgtactcatcgacggcgcgcagtcggtaccg
cacctcacggtgaatctgcaggagctcggcgccgatttcttcgtcttctcgggccataag
atctacggccccaccgggatcggtgtgctgtacggcagcgaggacgcgttggcggaaaca
cccccgtggcagggcggcggcaacatgatcgccgatgtcaccctggagcgcgcggtgttc
cagggtccgcccaacaagttcgaggcgggcaccgggaacatcgccgatgccgtcggactg
ggtgaggcgctgcggtatgtggagcgcatcggcatcgaccgcatcgctgaatacgagcat
gcgcttctggagtacgccactccgcaattggccgcgatacctggcgtaagactggtgggg
acggccgatcacaaggcatcggtgctgtcgttcgtgctcgacgggcacgaaccggtggag
gtcggcaaggcactcaacgccgacggcatcgcggtgcgggccggacaccactgcgcgcag
ccgattctgcggcggctggggctggagcagacggtgcggccgtcgttcgcgttctacaac
accttcgacgagatcgacgtcttcatcgatgcggtgcggcggctggcggaaagcggtggg
cccaaggcgtag
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