Mycobacteroides salmoniphilum: DSM43276_00279
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Entry
DSM43276_00279 CDS
T06041
Symbol
polC_1
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msal
Mycobacteroides salmoniphilum
Pathway
msal03030
DNA replication
msal03430
Mismatch repair
msal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM43276_00279 (polC_1)
03430 Mismatch repair
DSM43276_00279 (polC_1)
03440 Homologous recombination
DSM43276_00279 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msal03032
]
DSM43276_00279 (polC_1)
03400 DNA repair and recombination proteins [BR:
msal03400
]
DSM43276_00279 (polC_1)
Enzymes [BR:
msal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM43276_00279 (polC_1)
DNA replication proteins [BR:
msal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSM43276_00279 (polC_1)
DNA repair and recombination proteins [BR:
msal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSM43276_00279 (polC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QCH22044
LinkDB
All DBs
Position
277640..278623
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AA seq
327 aa
AA seq
DB search
MPIWGQTPDHSPKWVVVDLETSGFQPGRARVISVAALALDADGTITDSVVSLLNPGVDPG
PTHVHGLTPEMLEGQPEFADVVPDLIALLRGRTLVAHNVGFDYSFLAAEAELAGAELPTE
AVMCTVELTRRLDLETPNLRLETLAAHWGVEQLKAHDAYDDARVLAEVLPKVLDRARERG
TWLPIRETTRKRWPNGRVTHDELRSLKTVASRQPCHWLNPGPFIAGQPLVQGMRVALSSE
VARTHEELVEQIMQAGLAYADTVDEDTSVVICNQPNPEQGKGFHARSLGVPLLDDQTFMT
EVRRVAGGTDIEQFSVPSRAGAQYSLF
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgccgatctgggggcagacgcccgaccacagccccaagtgggtggtcgttgacctggag
acttccggctttcagccaggtcgggcacgtgtcatcagtgtcgcggcgttggcgctggat
gccgacgggaccatcaccgacagcgtggtgagtctgctcaacccgggtgttgatccgggc
ccgacgcatgtgcacggcctcactccggaaatgctggagggacagcccgagttcgccgat
gtcgtccccgatctcatcgcgctgctgcggggccggacactggttgctcacaatgtcggg
ttcgactactcgttcctcgcggcagaggcagaactggccggcgccgagctgcctaccgag
gcggtgatgtgcacggtcgagctgacccggcgtctcgacctggaaacgccgaacctgcgc
ctggaaacccttgccgcgcattggggcgtcgaacagctcaaggctcacgacgcctatgac
gacgcccgggtgcttgccgaggtgctaccgaaggtgcttgatcgagcgcgggaacgcgga
acctggcttcccatccgcgagaccacccgtaagcgctggcccaacggccgtgtgacacac
gacgagctgcgctcgctcaagaccgtggcatcgcgtcagccgtgtcactggctcaatccc
ggcccgttcatcgcgggtcagcctctggtgcagggcatgcgggtggccttgagttccgag
gtcgctcgcacccacgaggagctggtcgagcagatcatgcaggctggcctcgcttatgcc
gatacggtcgacgaggacacctcggtagtgatctgcaaccagccaaaccctgagcagggt
aagggatttcatgcacgatcgctcggtgtgccgttgctggatgaccagaccttcatgacc
gaagtgcggcgcgttgccggcggtaccgacattgagcagttctcggttcccagccgcgcc
ggagcgcagtattcgctgttctga
DBGET
integrated database retrieval system
