Mycobacteroides salmoniphilum: DSM43276_01897
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Entry
DSM43276_01897 CDS
T06041
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
msal
Mycobacteroides salmoniphilum
Brite
KEGG Orthology (KO) [BR:
msal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
msal03051
]
DSM43276_01897 (pafA)
Enzymes [BR:
msal01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
DSM43276_01897 (pafA)
Proteasome [BR:
msal03051
]
Prokaryotic proteasome
Bacterial regulatory particles
DSM43276_01897 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QCH23637
LinkDB
All DBs
Position
1916859..1918202
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AA seq
447 aa
AA seq
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MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDSLVQLVTHDRAGERVLEDLLIDAEQRLSDEGIGGDIYLFKNNTDSAGNSYGCHEN
YLIVRAGEFSRISDVLLPFLVTRQLICGAGKILQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMSESTTMLKVGTAALVLEMIESGVAFRDFSL
DNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYHARAVEHLNTREPNAQVEQVVEL
WGRTLDAVEAQDFSKVDTEIDWVIKRKLFQRYQDRYNMELSDPKIAQLDLAYHDIKRGRG
VFDLLQRKGLAARVTTDEEIKAAVDQPPQTTRAKLRGDFITAAQEAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgagaccgagttcggcgtcacgtgcacatttcacggccaccgtcgactgagc
ccggatgaggtcgcccgctatctgttccgtcgcgtggtgtcctggggacgcagttccaac
gtgttcctgcgcaatggcgcacggctctacctcgatgtgggcagccacccggagtacgcc
accgccgaatgcgacagcctggtgcagctggtcacccatgaccgtgccggggaacgtgtc
ctggaggacctgctgatcgatgccgagcagcgcctgtccgacgagggcatcggcggcgac
atctacttgttcaagaacaacaccgactcggccggcaactcctatggctgccacgagaac
tacctcatcgtgcgggcgggggagttctcccggatttccgatgtgctgctgcccttcctg
gtgacacgccagctgatctgtggcgcgggcaagatactgcaaacccccaaggcggcgacc
ttctgcttgtcgcaacgcgccgaacacatttgggaaggcgtgtcctcggcgaccacccgc
agccgtcccatcatcaacacccgcgatgagccgcacgcggacgccgagaagtaccggcgg
ctgcacgtcatcgtcggcgactccaacatgtccgagtcgaccaccatgctcaaggtcggc
accgcggcgctggtgctggagatgatcgaaagtggcgtcgctttccgggacttctcgctg
gataacccgatccgcgccatccgtgaggtcagccatgacctcacgggccgccgccccgtg
cggctcgccggtgggcgtcaggccagtgcgctggacatccagcgtgagtaccacgctcgc
gccgtcgagcacctgaacacgcgcgagccgaacgcgcaggtcgagcaggtcgtggaactc
tggggacgcacgctggatgccgttgaggcccaggacttctcgaaggtcgacaccgagatc
gactgggtgatcaagcgcaagctgttccagcgctatcaggaccgctacaacatggagctg
tccgacccgaagatcgcccagctggacctggcctatcacgacatcaagcgcggcaggggc
gtgttcgacctgctgcagcgcaaggggttggccgcccgtgtcaccaccgacgaggagatc
aaggccgccgtcgaccagcctccgcagaccacccgcgccaagctgcgcggtgatttcatc
accgccgctcaggaggccggccgcgatttcacggtggactgggtgcacctcaagctcaac
gaccaggcacagcgcacggtgttgtgtaaggacccgttccggtccgtcgacgagcgggtg
gaacggctcatcgccagcatgtag
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