Mycobacteroides salmoniphilum: DSM43276_02034
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Entry
DSM43276_02034 CDS
T06041
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
msal
Mycobacteroides salmoniphilum
Pathway
msal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSM43276_02034 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msal03400
]
DSM43276_02034 (uvrA)
DNA repair and recombination proteins [BR:
msal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM43276_02034 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSM43276_02034 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_16
AAA_25
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
ScfRs
Motif
Other DBs
NCBI-ProteinID:
QCH23774
LinkDB
All DBs
Position
2073666..2076620
Genome browser
AA seq
984 aa
AA seq
DB search
MADRLIVRGAREHNLRGIDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGSPH
CPVCGEKIAKQTPQQIVDQVLDMEEGLRFQVLAPVVRTRKGEFVDLFEQLNSQGYSRIRV
DGVVHSLTDPPKLKKQEKHDIEVVIDRLAVKNSAKQRLTDSVETALRLADGIVVLEFVDA
DEDSPQRERRFSEKLACPNGHPLAVDDLEPRSFSFNSPYGACPECTGLGIKKEVDPDLVV
PDPDMTLAEGAIAPWSMGQNADYFVRLMAGLGDALGFDVDTPWKKLPAAAKKALLDGSSE
QVHVRYKNRYGRTRSYYAEFEGVLAFLQRRMEQTESEWAKERYEGFMRDIPCPECNGTRL
KPEILSVTLTAGEHGAKSIAQVCDLSIAECAQFLNALTLGHREQAIAGQVLKEVQFRLGF
LLDVGLQYLSLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIE
TLTRLRDLGNTLIVVEHDEDTIKHADWVVDIGPAAGEHGGQVVHSGTYAELLKNKKSITG
SYLSGAESIPLPLMRRTIDSKRQVTVVGAREHNLKDIDVSFPLGVLTSVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHTRVTGLDQVDKLVRVDQSPIGRTPRSNPATYTGVFDK
IRTLFAATTEAKVRGYQPGRFSFNVKGGRCESCTGDGTIKIEMNFLPDVYVPCEVCHGAR
YNRETLEVHYKGKTIAQVLDMPIEEAAEFFEPITSIHRYLNTLVEVGLGYVRLGQPAPTL
SGGEAQRVKLAAELQKRSTGKTVYILDEPTTGLHFEDIRKLLTVINGLVDKGNTVIVIEH
NLDVVKTSDWVIDMGPEGGSGGGTVVAQGAPESVAQTAGSYTGEFLVDLLPKPVRNGKTS
AKAPSKSAGKPPAKPRTRKVVTPV
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctgatcgtgcggggcgcgcgtgagcacaacctgcgcggtattgacctt
gacctaccccgagacagcctcatcgtcttcacgggtctctccggatccgggaagtcgagc
ctggccttcgacaccatcttcgccgaggggcaacgccggtacgtcgaatccctgtccgcg
tacgcccgccagtttctggggcagatggacaagcccgatgtcgatttcatcgaggggctc
tctcctgcggtgtccatcgaccagaaatccaccaaccgcaaccctcggtccaccgtgggc
accatcaccgaggtctatgactacctacgtctgctgtacgcgcgggccggctcaccgcat
tgcccggtatgcggggagaagatcgccaagcagaccccgcagcagatcgtcgaccaggtg
ctggacatggaggagggcctgcggttccaggtgctcgcgcccgtggtgcgcacgcgcaag
ggcgagttcgtcgacctcttcgaacagctgaactcccagggatacagccgtattcgggtt
gacggcgtggtgcattcgctcaccgatccgcccaagctcaagaagcaggagaagcacgac
atcgaggtggtcatcgaccgtctcgccgtcaagaacagcgccaagcagcgcctgacggac
tcggtggagacggccctgcgccttgccgacggcatcgtggtgctcgagttcgtcgatgcc
gacgaggactctccgcagcgcgaacgcagattctccgagaaactcgcctgccctaatggc
catccgctcgccgtggacgatcttgaaccacggtcgttttccttcaactcgccctatggc
gcctgccccgagtgcacgggtctggggatcaagaaggaagtcgaccccgacctcgtggtc
cccgacccggacatgaccctcgccgagggcgccatcgcaccctggtcgatggggcagaac
gccgactacttcgtccggctcatggcagggctgggcgacgccctcgggtttgacgtggac
accccttggaagaagcttccggcggccgccaagaaggcgctcctggacggctcttccgag
caagtccatgtcagatacaagaaccggtacggccgcacgcgttcgtactacgccgaattt
gaaggcgtgctggcgttcctgcaacgccgcatggagcagaccgagtcggaatgggccaag
gaacgctatgagggcttcatgcgggacattccgtgccccgagtgcaacggaacccgcctg
aagccggagattctgtccgtcacattgaccgccggcgagcacggcgccaaatcgattgcg
caggtctgtgacctgtccatcgccgaatgcgcgcagttcctcaacgcattgacgctgggg
caccgtgagcaggccatcgccgggcaggttctcaaggaagttcagttccggctgggcttc
ctgctggacgtcggccttcagtacttgtcgttgtcgcgcgctgcgggcacattgtccggt
ggcgaggcacagcgcatccggctggccactcagatcggctccgggctggtgggtgtgctt
tatgtactcgacgagccgtccatcggtctgcatcagcgcgataaccgacgactcatcgaa
acgctcacgcggctccgggatctcggcaacacgttgatcgtcgtggagcacgacgaggac
accatcaagcacgccgactgggtcgtcgacatcggaccggccgcgggggagcacggtggg
caggtggtgcacagcggcacctatgccgaactgctgaaaaacaagaagtccatcaccggt
tcgtatctttctggggcagagagcattccgctgccgttgatgcgtcgcacgatcgactcg
aagcgtcaggtcaccgtggtcggagcgcgtgagcacaacctcaaggacatcgacgtctcc
ttcccactcggtgtgctgacctcggtcaccggagtgtcgggttcagggaagtcgacgctg
gtcaacgacatcctcgccaccgtgttggccaacaagctcaacggtgcacgccaggtgccc
gggcggcacacccgagtgaccggtttggaccaggtcgacaagctcgtgcgggtcgaccaa
tcgccgatcgggcgtacaccccgctccaatccggcgacctacaccggggtcttcgacaag
attcggacgctgttcgcggcgaccaccgaggccaaggtgcgtggttatcaaccgggccgg
ttctccttcaacgtcaagggcggtcgctgcgagtcctgcacgggtgacggcaccatcaag
atcgagatgaacttcctgccggatgtatacgtgccgtgcgaggtgtgccacggcgcgcgc
tacaaccgggaaacgctcgaggtccactacaagggcaagacgatcgcgcaggtgctggac
atgccgatcgaggaagccgccgaattcttcgagcccatcacctctattcaccggtatctg
aacacgctggtggaggtcggcctgggttatgtgcggctggggcagccggctccgacgctc
tccggcggggaggcgcagcgcgtcaaattggccgcggagctgcagaagcgttcgacgggc
aagaccgtgtacatcctcgacgagcccactaccggtcttcatttcgaggacatccgcaag
ctgctcaccgtgatcaacggcttggtcgacaagggcaacaccgtcatcgtgatcgagcac
aacctcgatgtcgtcaagacgtcggactgggtcatcgacatgggccccgagggtgggtcg
ggaggcggcaccgtcgtggcacagggcgcacccgagtcggtggcacagaccgcgggcagc
tataccggtgagttcctggtggacctgttgcccaagcccgtccggaacggtaagacttcc
gcgaaggctccgtccaagagcgccggaaagccgcctgccaaaccgcgtaccaggaaggtt
gtcacgccggtctag
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integrated database retrieval system
