Mycobacteroides salmoniphilum: DSM43276_02052
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Entry
DSM43276_02052 CDS
T06041
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
msal
Mycobacteroides salmoniphilum
Pathway
msal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM43276_02052 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msal03000
]
DSM43276_02052 (alkA)
03400 DNA repair and recombination proteins [BR:
msal03400
]
DSM43276_02052 (alkA)
Enzymes [BR:
msal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DSM43276_02052 (alkA)
Transcription factors [BR:
msal03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DSM43276_02052 (alkA)
DNA repair and recombination proteins [BR:
msal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSM43276_02052 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QCH23791
LinkDB
All DBs
Position
complement(2092410..2093903)
Genome browser
AA seq
497 aa
AA seq
DB search
MLGCMELDAEACYRAVQSRDTRFDGQFYTAVRTTGIYCRPSCPAITPKRQNVSFHPTAAS
AQADGYRACRRCQPDAAPGSPLWNIKSDLAVRAMRLIGDGVVEREGVEGLSRALGYSSRQ
LNRVLLAELGAGPLALARANRATTARLLIQRTELAMSDIAFAAGFSSIRQFNDTIAAVFA
TTPSKLRIELPRRENVASAPIPGGVSLKLPLRQPHNVAWSTWLLEHHCARGVEDFSEGRY
TRALRMPHGPVVVTLTVSADQVRADLQLSDMRDLAPTVARLRHLLDLDADPAAVDGALLS
HPALAPLVAEAPGIRVPGTVDGSELLLRTMIGQQISVSAANTATANLVAALGEEVTDTTG
RVTHLFPTAESVAAADAGVMVGPAARIGAIVEAADRLATGKLELHQGVTATDMRRQLLEI
KGIGPWTADYVVMRQLADPDVLLEHDLVLRRGALSEGIDLAAARGCSPWRSYVSMHLWRK
GIAAQTRPRTHTRKGNS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgctcggatgcatggaacttgacgcggaggcctgttaccgggcggtgcaatcccgtgac
acgcgattcgacgggcagttctacacggcggttcgcaccacgggaatctactgccggccg
tcctgtcccgccatcacaccaaaacgacagaacgtctccttccaccccaccgccgcctcc
gctcaggccgatggctatcgggcctgccggcgctgccagccggacgcggcgcctggatca
ccactgtggaacatcaagtccgacttggctgtccgggccatgcgcctcatcggcgacggt
gtggtcgagcgcgaaggagtggaggggctatctcgcgccctgggatactcgagccgtcaa
ctcaacagggttctgctggccgagctcggcgccggcccgctggccctggcacgggccaac
cgggccaccaccgcacgcctgctgattcagcggaccgagctggcgatgtccgatatcgcc
tttgcggcaggtttttccagcatccggcagttcaacgacacgatcgcggcggtgttcgcg
acgacaccatcgaagctgcggatcgagttaccccgccgagaaaacgtcgcgtccgctccg
atacctggcggtgtcagcctcaaacttcccctgcggcaacctcataacgtcgcctggtct
acttggctgctggaacatcactgcgcacgcggtgtcgaagacttttccgaagggcggtac
acccgggcgctgaggatgcctcatggtccggtcgtggtaaccctgacggtgtccgccgat
caggtgcgggcggacctgcagctcagtgatatgcgagacctggcgcctacggtggcgcgc
ctgcgtcacctacttgacctcgacgccgatcccgcggcggtcgacggcgcgttgctgtct
catcccgcgctggccccccttgtcgccgaggctcccgggatcagggttcccgggacggtc
gacgggtcagagctgctgttgcgcaccatgatcggtcagcagatctcggtttccgcggcc
aacacggcgacggcgaacctggttgccgcactcggtgaggaagtgacggacacgacggga
agggtcactcacctctttcccacggccgaatctgtcgctgccgcggacgcgggggtaatg
gttggtcccgcggcacgaatcggcgcaatcgtcgaagcagcggataggcttgcgacgggc
aaactggagttgcatcagggcgtgaccgccaccgacatgcgccggcagctattggaaatc
aagggaatcggaccatggaccgcggactacgtggtgatgcgtcaactcgctgatcccgat
gtcctgctcgaacacgatctggtgctgcgccgtggcgcgttgtccgagggcatcgacctc
gccgccgcccgcggctgctcgccgtggcgttcctatgtatctatgcatctgtggcgcaag
gggatcgccgcgcagacacgtccacgcacccacacccggaaaggaaactcatga
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