Mycobacteroides salmoniphilum: DSM43276_02230
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Entry
DSM43276_02230 CDS
T06041
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
msal
Mycobacteroides salmoniphilum
Brite
KEGG Orthology (KO) [BR:
msal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msal03021
]
DSM43276_02230 (sigF)
Transcription machinery [BR:
msal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DSM43276_02230 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_23
HTH_10
MarR
HTH_24
MarR_2
HTH_31
HTH_Tnp_ISL3
DUF7343
HTH_28
GerE
HTH_7
KORA
HTH_19
LacI
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QCH23968
LinkDB
All DBs
Position
2268612..2269430
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AA seq
272 aa
AA seq
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MECPVDAPETGRTEARSKPSGTSDDYSDVPDMFLALRDLPPDSPAYHRLREQIVTRCLHL
ADNVARHFDRRGEDLEDLTQVARVGLLNAVNRFDPEKGSSFLGFAVPTMMGEVRRHFRDH
SWSMHVPRSIRDRHAQIARATAELTQNLQRSPTASELATELGISREEVVESLVAADAYQP
QSIDAPVAYGDDESKHLADLLGDNDPALEHVTNREAVRPLLAGLPPRERIVLELRFFKGM
TQSQIAEQIGVSQMHVSRILSDTLRYLREQLQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggaatgccctgtggatgctccggagaccgggcgcacggaggctagatccaaaccaagt
ggaacatccgacgactactcggacgttcccgacatgtttctggcgctccgcgacctgccg
cccgatagccccgcgtaccaccgtctccgtgagcagatcgtgaccaggtgtctccatttg
gccgacaatgtcgcacgccatttcgatcgccgtggtgaggatctcgaagacctgacccaa
gtggcgcgtgttggactactcaatgcggttaaccgctttgatcccgaaaaaggttcgagc
ttccttggtttcgccgttcctaccatgatgggggaggtgcgtcggcatttccgcgaccat
agttggtcaatgcacgtgccccgttccatccgggacaggcatgcccagatcgctagggcc
actgcggaattaacgcagaacctgcaacggtcacccaccgccagtgaattggcaaccgaa
ttgggtatcagccgtgaagaagtcgtggagagcctggttgcggcggatgcatatcagccc
cagtcaatcgacgcacctgtggcgtacggagatgacgaatccaagcatttggccgacttg
ctgggtgacaacgacccagcgcttgaacacgtcacgaatcgcgaggcagtacgtccgctg
ttggctggcttgccgcctcgcgagcgcatcgtcctggaacttaggttcttcaaagggatg
acgcagagtcaaatagctgagcagatcggcgtgtcccagatgcatgtgtcacggattctc
agcgacacactgcgatacctccgggaacaactgcagtag
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