Mycobacteroides salmoniphilum: DSM43276_02396
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Entry
DSM43276_02396 CDS
T06041
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msal
Mycobacteroides salmoniphilum
Pathway
msal03030
DNA replication
msal03430
Mismatch repair
msal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM43276_02396 (dnaE)
03430 Mismatch repair
DSM43276_02396 (dnaE)
03440 Homologous recombination
DSM43276_02396 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msal03032
]
DSM43276_02396 (dnaE)
03400 DNA repair and recombination proteins [BR:
msal03400
]
DSM43276_02396 (dnaE)
Enzymes [BR:
msal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM43276_02396 (dnaE)
DNA replication proteins [BR:
msal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSM43276_02396 (dnaE)
DNA repair and recombination proteins [BR:
msal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSM43276_02396 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QCH24133
LinkDB
All DBs
Position
complement(2430109..2433666)
Genome browser
AA seq
1185 aa
AA seq
DB search
MSSSNSSFVHLHNHTEYSMLDGAAKIKPMLAEVERLGMSAVGMTDHGNMYGASEFYNVAT
ATGVKPIIGIEAYIAPASRFDTKRVFWGDPGQKSDDVSGSGSYTHMTMVAENATGLRNLF
KLSSLASFEGQLGKWARMDAELITEHASGIIATTGCPSGEVQTRLRLGQEAEAVEAAGKW
QEIFGKDNFFLELMDHGLSIERRVREGLLELGKKLGIPPLATNDCHYVTKDHSHNHEALL
CVQTGKTMSDPTRFKFDGDGYFLKPASEMRDLWDDSVPGACDNTLLIAERVQSYEDVWSF
KDRMPVFPVPEGEDQDSWLRKEVDRGLERRFHGIPGGVPDEYFTRAHYELDVIKQKGFPA
YFLVVGDLVTHAKEVGIRVGPGRGSAAGSLVAYSLGITNIDPIPHGLLFERFLNPERPSA
PDIDIDFDDRRRGEMVRYATDKWGSDRVAQVITFGTIKTKAALKDSARIHYGQPGFAIAD
RITKALPPPIMAKDIPLSGITDPEHERYKEAAEVRTLIDTDPDVRTIYQTARGLEGLIRN
AGVHACAVIMSSEPLTEAIPLWRRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGD
ALDNIKANRGVDLDLDHLPLEDPATYELLSRGDTLGVFQLDGGPMRDLLRRMQPTGFNDI
VAVLALYRPGPMGMNAHNDYADRKNGRQPIKPIHPELEEPLKDILSETYGLIVYQEQIMF
IAQKVASYSMGKADALRKAMGKKKLEVLEAEYKGFYEGMTNNGFSEKAVKALWDTILPFA
GYAFNKSHAAGYGLVSFWTAYLKANYPGEYMAGLLTSVGDDKDKAAIYLADCRRLGITVL
PPDVNESVHNFASVGEDIRYGLGGVRNVGANVVQSLIATRESKGAFTDFSDYLHKIDIAA
CNKKVTESLVKAGAFDSLGHSRKGLFLVQSDAVDSVLGTKKAEAMGQFDLFGSAGDDDAD
AANVFAIKVPDDEWEEKHKLALEREMLGLYVSGHPLNGVAHLLGRQTDTQIPTILEGDIA
NDTQVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVLFFPQAYSVYGAEIADDAVVL
VNAKVAIRDDRISLIANDLVVPDFSQASDDRPVAVTLPTRQCTIDKVTALKQVLARHPGT
NQVHLRLISGERVTTLELDQSLRVTPSSALMGDLKALLGPGCLGG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcctcgaattcttcgttcgtgcacctgcacaaccacaccgagtactcgatgctc
gatggtgccgcgaagatcaagccgatgctcgcggaggtggagcgtctgggcatgtcggcg
gtcggcatgaccgaccacgggaacatgtacggcgccagcgagttctacaacgtcgccacc
gccaccggggtcaagcccatcatcggcatcgaggcgtacatcgcacccgcctcgcggttc
gacaccaagcgtgtcttctggggcgatccgggacagaagtccgatgacgtgtccggttcg
ggttcgtacacccatatgacgatggtcgccgagaatgcgacaggcctgcgcaacctgttc
aagctgtcctcgctggcctcgttcgaggggcagctcggtaagtgggctcgcatggacgcc
gagctcatcaccgaacacgcaagcggcatcatcgccaccacgggatgtccctcgggtgag
gtacaaactcggcttcgtctcggtcaggaggccgaagcggtcgaggccgccggcaaatgg
caggagatcttcgggaaggacaacttcttcctggagctgatggaccacggactgtccatc
gaacgccgggtgcgcgagggcctgctggagctgggaaagaagctcggcataccgccgttg
gccaccaacgactgtcattacgtcaccaaggaccactcacacaaccacgaagcactgctg
tgcgtgcagaccggcaagaccatgtcggaccccacgcgcttcaagttcgacggtgacggc
tacttcctgaagccggcttccgagatgcgcgatctttgggacgactcggtgcctggcgcg
tgtgacaacacattgctcatcgccgagcgggtgcagtcatacgaggacgtctggagcttc
aaggaccgtatgccggtgttcccggtgccggagggtgaagaccaggattcctggctgcgc
aaggaagtcgaccgcggactggagcgtcgcttccacggtatccccggcggagtgcctgac
gagtacttcacccgcgcgcactacgagctggacgtcatcaagcaaaagggttttcccgca
tactttctcgtcgtcggcgacctcgtcacgcatgccaaggaagtcggtatcagggttggt
ccgggccgtgggtcggcggccggatcgctggttgcctactcgctcggcatcaccaacatc
gacccgatcccgcacgggctgctgttcgagcgcttcctcaatccggaacgaccgtcggca
cctgatatcgatatcgacttcgacgatcgtcgccgcggcgagatggttcggtacgccacc
gataagtggggcagtgaccgggtggcgcaggtcatcactttcggcacgattaagaccaag
gcggcgctgaaggactcggcgcgtatccactacgggcagcccgggttcgcgatcgcggat
cggatcaccaaggcgctgccaccgccgatcatggccaaggacattccgctgtcgggtatc
accgatcccgagcatgagcggtacaaggaggccgccgaggttcgtaccctgatcgacacc
gatccggatgtgcggaccatctaccagaccgcgcgcggtctggaggggttgatccgtaac
gcgggtgtgcacgcgtgtgcggtcatcatgagctcggaaccgctcaccgaggccatcccg
ctgtggcggcgcgcgcaggacggcgccatcatcaccggctgggactacccgtcgtgtgag
gccatcggcctgttgaagatggatttcctggggctgcgcaacctcaccgtcatcggcgat
gcgttggacaacatcaaggccaaccgtggcgtcgacctcgacctggatcatctgcctctg
gaagatccggccacctacgaattactgtcccgcggcgacaccctcggggtattccagctc
gatggcgggcccatgcgggatctgctgcgccgcatgcagcccaccggattcaacgacatc
gtcgccgtgctggcgctatatcgtcccggcccgatgggcatgaacgcgcacaacgactac
gccgaccgtaagaacggtcgccaaccgatcaagccgattcaccccgagctggaagagcca
ctcaaggacatcctctcggagacctacggtctgatcgtctaccaagagcagatcatgttc
atcgcccagaaggtcgcctcgtactcgatgggtaaggccgatgcgctccgcaaggccatg
ggcaagaagaagcttgaggtcctggaggccgagtacaagggcttctacgaaggcatgacc
aacaacggcttctccgaaaaggccgttaaggcgttgtgggacaccattcttccgttcgcc
ggctacgcgttcaacaagtcgcatgccgccgggtacggattggtgtcgttctggaccgcc
tacctcaaggccaattacccgggcgaatacatggccgggctgctcacctccgtgggcgac
gacaaggataaggcggccatctacctcgccgactgccgtcgtctgggcatcacggtgcta
ccgccggacgtcaacgagtcggtgcacaacttcgcatcggtgggggaggacatccgctac
gggctcggcggcgtccgcaatgtcggcgccaacgtggtgcagtcgctcatcgcgacccga
gaatcgaagggcgcctttaccgacttctccgactatctgcacaagattgacatcgcggcc
tgcaataagaaggtcacggaatcgctggtgaaggcgggggcctttgactccctggggcat
tcccgcaaggggctgtttcttgtccagtccgatgccgtcgactcggtgctgggcaccaag
aaggccgaagcgatggggcagttcgacctcttcggcagtgcgggggacgacgacgccgac
gcagccaatgtgttcgccatcaaggtgcccgacgacgaatgggaagagaagcacaagctc
gccctcgagcgagaaatgctgggcctgtatgtatccgggcatccgctcaacggggtggcg
cacctgctgggtcgtcagaccgacacccagatccctacgatcctcgaaggcgatatcgcc
aacgacacccaggtgcgggtgggcgggattctcgcctcggtcaaccgtcgtgtgaacaag
aacggcatgccctgggcctcagcgcagctcgaggacctcacgggtggcatcgaggtgctc
ttcttcccgcaggcctactcggtatacggcgccgagatagccgacgacgcggtggttctg
gtgaatgcgaaggtggcgattcgcgatgaccgaatctccttgatcgccaatgatcttgtg
gtacccgacttctcgcaggcatccgacgaccgtccggttgccgtgacgctgccgacgagg
cagtgcaccatcgacaaggtcaccgcgctcaagcaagtgttggcgcggcatccgggcacc
aaccaggttcatctgcgtttgatcagtggggagcgcgtcacgacgttggagctcgatcag
tcgcttcgggtgacaccgtcatcggccctgatgggggatctcaaggcgctactcgggccg
ggctgtctgggcggctag
DBGET
integrated database retrieval system
