Mycobacteroides salmoniphilum: DSM43276_02768
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Entry
DSM43276_02768 CDS
T06041
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
msal
Mycobacteroides salmoniphilum
Brite
KEGG Orthology (KO) [BR:
msal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msal03016
]
DSM43276_02768 (rnd)
Enzymes [BR:
msal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DSM43276_02768 (rnd)
Transfer RNA biogenesis [BR:
msal03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DSM43276_02768 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
SgrA_ig-like
Motif
Other DBs
NCBI-ProteinID:
QCH24500
LinkDB
All DBs
Position
2807662..2808864
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AA seq
400 aa
AA seq
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MDNDAELPEPTPLLRPAEGVPPLTASTDEIRMAAERLGCGTGAFAVDAERASGFRYSNRA
YLIQIRRRGAGTVLLDPTNVPDALGPIVEVLGAAEWILHAADQDLPCLAELEMRPPSVYD
TELAGRLAGFEKVNLAAMVHRLLGLGLAKGHGAADWSKRPLPDDWLNYAALDVEVLIELR
EKVAEVLDEQDKTEWARQEFEHLAHMPASATRRDNWRRTSGIHKVRKPAQLAAVRELWLS
RDELARARDVAPGRTLPDTAIVEAAMADPKTRNELIALPVFGGPRQKQQADRWLTALAKA
RDAATPPPVNEPTIGPPPVSRWSRRKPEAYARLEAARTVLSALSEQITVPVENIVTPEIV
RRLCWDWDGNGDVEEILAGHGARPWQRELAAPILTEALTD
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgacgccgaacttcccgaaccgacaccgctgcttcgccccgccgaaggggtg
ccgccactcaccgcctcgacggatgagatccgcatggccgcagaacgtttggggtgtgga
accggcgcctttgccgttgacgccgagcgcgcgtccggattccggtactccaatcgggcc
tacctgatccagattcgccgacgcggcgcaggaacggtactgctggaccctacgaatgtt
cccgacgcactgggaccgatcgtcgaggtgctgggcgccgccgaatggatcttgcacgcc
gccgaccaggatctgccgtgcctggccgaattggagatgagaccaccgtcggtctacgac
accgaactggccgggcgcctggccggtttcgagaaggtaaacctggccgcgatggtgcat
cgactgctcggtctgggcctggccaagggacatggcgccgccgactggtccaaacgtccc
ctgccggacgactggctcaactacgcggcgctggacgtcgaggtgctcatcgaactgcgc
gaaaaagtcgccgaggtgctcgacgagcaagacaagaccgaatgggcccggcaggagttc
gagcaccttgcgcatatgccggcctcggcgacgcgacgggacaactggcgtcgcacctcc
ggaatccacaaggtacgcaaacccgcacagttggcggccgtccgcgaattatggctcagc
cgtgatgaattggcacgcgcacgagatgtggcccccggccggacgctacccgatacggcg
atcgtcgaagcggcgatggccgatccgaaaacccgtaacgaactgatcgccctgccggtc
ttcggcggtccccggcagaaacagcaggccgatcgttggctcacggcgctggcgaaagcc
cgcgacgctgccacccctccgccggtcaacgaacccaccatcgggccacctccggtatcg
cgatggtcgcgacgcaaacccgaggcctacgcgcgcctggaggccgcgcgcacagtcctg
tcggcactctccgagcagatcacggtgccggtggagaacatcgtcaccccggagatcgtg
cggcggctctgctgggactgggacggcaacggggacgtcgaagagatactcgccggccac
ggcgcccgcccatggcaacgggaactggcggcgccgatcctcaccgaggcgctgaccgac
taa
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