Mycobacteroides salmoniphilum: DSM43276_03336
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Entry
DSM43276_03336 CDS
T06041
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msal
Mycobacteroides salmoniphilum
Pathway
msal03420
Nucleotide excision repair
msal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSM43276_03336 (uvrD2)
03430 Mismatch repair
DSM43276_03336 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msal03400
]
DSM43276_03336 (uvrD2)
Enzymes [BR:
msal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM43276_03336 (uvrD2)
DNA repair and recombination proteins [BR:
msal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM43276_03336 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
DSM43276_03336 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QCH25062
LinkDB
All DBs
Position
complement(3356242..3358368)
Genome browser
AA seq
708 aa
AA seq
DB search
MPRAGPAAGVVGGCCEDGPVARSLLDGLDDEQRAAVTAPRGPVCVLAGAGTGKTRTITHR
IAHLVESGHVAPGQILAVTFTQRAAGEMRGRLRDLGVGSAQAVTFHAAGLRQLRYFWPQL
VGDTRWELIDSKFTIVAQAANRAKLSTSTDTVRDLAGEIEWAKASLISPEAYPAAAAKFT
RDTPVPAEQVAKVYAGYEKLKARPDGSTLLDFDDLLLHTAAAIENSESVAEEFRDRYRCF
VVDEYQDVTPLQQRVLDAWLGPRDDLTVVGDANQTIYSFTGATPQYLLGFSRRFPEAAVV
RLERDYRSTPQVVSLANRVIAAAQGRVAGSKLQLIGQRPEGPAPRFSEHDDEAAEAKSVA
KSIAALIESGTLASEIAVLYRINAQSEVYEEALTEAGVPFQVRGGEGFFTRQEVRQALVA
LQRAADRESADIPVPQQVRDVLEPLGLSAEEPHGTQARERWESLRALVALAEEECARLPE
LDLPGLVRELRVRAEARHPPTVQGVTLASLHAAKGLEWDAVFLVGLADGTLPISHALSRA
GDIEPVEEERRLLYVGITRARVHVNLSWALARAAGGRKTRKHSRFLNGVAPTAQVSATVA
PRRRGSGARCRICNAALNTPAAVLLRRCESCPSDIDEELLVALKDWRLKTAKEMKVPAFV
VFTDNTLIAIAELLPGDDAALVAIPGIGARKLEQYGPDVLRLVRARSS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgccgagagcggggccagcggccggtgttgtcggcggttgctgcgaagatggcccggtg
gcgcgttctctcctcgatggtcttgacgacgagcagcgcgccgctgtcaccgcgccgcgg
ggccccgtctgcgtgctcgccggcgcggggaccggcaagacccgcaccatcacccatcgc
atcgcgcacctggtcgaatccggccatgtcgctcccggtcagatcctcgcggtcaccttc
acccagcgagcagcaggtgagatgcgtggacggctgcgtgatctcggtgtcggatccgcg
caggccgtcacgttccacgccgcgggactgcggcagctgcgatacttctggccgcagctg
gtcggggatacgcgctgggagctgatcgacagcaagttcaccatcgtcgcccaagccgcg
aaccgtgccaagctgagcaccagtaccgataccgtgcgcgacctcgccggtgaaatcgag
tgggccaaggcctctttgatcagccccgaggcctatccggccgccgccgcgaaattcacg
cgagatacgccggtcccggccgaacaggtcgccaaggtctacgcgggttacgagaaactc
aaggcccggcccgatgggtccaccctgctcgatttcgatgacctgctgctgcacaccgcg
gccgccatcgagaactccgagtccgtcgccgaggaattccgggaccgctaccgctgtttc
gtggtcgacgagtaccaggacgtcacgccgctgcagcagcgcgtgctcgatgcgtggctc
ggtccccgcgacgacctgaccgtcgtgggcgatgccaaccagaccatctattccttcacc
ggggccaccccgcagtatctgcttggcttctcccgtcgattccccgaagcggccgtggtt
cgtctcgaacgtgactatcgctcgaccccgcaggtggtttcgctcgccaaccgtgtgatt
gcggccgcgcaaggaagggtggcgggcagcaagctgcaacttatcggtcaacgaccggag
ggtcctgctccgaggttctccgagcatgacgacgaggcggcggaggccaaatcggtcgcg
aaatccattgctgcgctgatcgaatccggaactctggcatcggagattgcggtgctgtac
cggatcaatgcgcagtcggaggtgtacgaggaggcgcttaccgaggcgggcgtgccgttc
caggtgcgcggtggcgaggggttcttcacccggcaagaggtgcgtcaggcgctggtggcc
ctgcaacgtgcggcggaccgcgaaagcgcagatatccctgtaccacaacaagttcgggat
gttctggaaccactgggattgtctgccgaggaaccacacggcacccaggcccgcgagcgg
tgggaatcgctgcgggccctcgtcgcgctcgccgaggaggaatgcgcgcgcctgccggag
ctggatctgccggggctggttcgtgagctccgggtgcgggccgaggcgcggcatccaccg
acggtgcagggcgtgacactggcctcgctgcatgcggcgaaggggcttgaatgggatgcg
gtgttcctggtggggctggccgacggcaccctacccatttcccatgccttgtcacgtgcc
ggggatattgaaccggttgaggaggagcggcgcctgctctacgtcggaatcacccgcgcg
cgcgtgcatgtgaacctgagctgggcgctcgcgcgggctgcgggcggccgcaagacgcgt
aagcattcgcggttcctcaatggggtcgctcccaccgcgcaagtctccgccacggtggca
ccgcggcgccggggtagtggcgcgcgctgccgaatctgcaatgcggcactgaacacgccg
gcggcggtgctgctgcggcgctgtgagagctgtccgtccgatattgacgaggaactcctt
gttgcactgaaggattggcgactcaagacggccaaggaaatgaaggtaccggcattcgtt
gtcttcaccgacaacaccttgatcgccatcgccgaactgcttcccggtgacgacgccgcg
ctcgtcgccattcccgggatcggcgcgcgcaaattggagcaatacggtcctgacgtgctg
cgcttggtacgtgccaggtcctcgtaa
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