Micropterus salmoides (largemouth bass): 119881858
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Entry
119881858 CDS
T07309
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03440
Homologous recombination
msam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119881858 (top3a)
03460 Fanconi anemia pathway
119881858 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msam03032
]
119881858 (top3a)
03400 DNA repair and recombination proteins [BR:
msam03400
]
119881858 (top3a)
Enzymes [BR:
msam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
119881858 (top3a)
DNA replication proteins [BR:
msam03032
]
Eukaryotic type
DNA Topoisomerases
119881858 (top3a)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
119881858 (top3a)
FA (Fanconi anemia) pathway
119881858 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
zf-GRF
Toprim
zf-C4_Topoisom
zf-C2H2_10
Zn_ribbon_recom
Lar_restr_allev
UPF0547
Motif
Other DBs
NCBI-GeneID:
119881858
NCBI-ProteinID:
XP_038547885
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MLVHLLGRHLLLRSGLRRLGIQQRCFCATQSDRGPDNPQQADMIRNRAQIKRVLCVAEKN
DAAKGISEIMSSGRSRRREGMSKFNKIYEYEYHLFGQNVTVTMTSVSGHLLGLEFKAPFQ
KWHSCNPVLLFDAEVEKYCPDNMLQIKRTLEKEVRQCQALVIWTDCDREGENIGFEIIDV
CKAVKPNLQVFRAKFSEITPSSIRRASETLTAPDANISDAVDVRQELDLRIGASFTRFQT
LRLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEEDTVEF
SWKRNRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVELEKLASRKLRIN
AKETMKIAEKLYTQGYISYPRTETNIFPANLALGPLVEQQTQSPVWGTFAQRVMDQPGGP
NPRQGKKSDQAHPPIHPTKYSNTLQGNEGRVYEFIVRHFLACVSQDALGNETVVEIDIAQ
EKFSTSGLMILARNYLDVYPYDRWSSKLIPVYEQGSQFQPSAIEMVDGQTSPPQLLTEAD
LISLMEKHGIGTDATHAEHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKP
NLRAELEADLKLVSEGRKDKHSVLQHYIQKYKTVFIESAKKAKKLDEALSPYLGAAQQIT
EAEQQDMEIPLPVRKCPHCGRDMVLKKKREGNSKYLSCVGYPACKTAVWFPDTVLEVSRD
DSICPTCQPHPVHMLKFTFRRGSLPPMMPLEFVGCIGGCDETLREVLDLKYLRAGGVGGG
GGGGGRGEGPRPPGPRPPRPEPPRAPRSNPQPSLPPVPSWNPQPRPPPGGGPDTNSDVIV
CNCGQDALLLTVRKDGPNQGRQFYKCNAGSCNFFLWADQPSQQGAPQSRGLPLQPPQTYQ
PPRPSLGFRDNSGGGRGQEGGSGGHVGHTMCNCNETAVTRTVQKDGPNKGRMFHTCGKPR
DQQCGFFQWADENEPPPGGFGGGFNGGGDGGKKGRKITGDTAANKPPAAKKPRTCGICHM
PGHTRVTCPQR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgcatctcctcgggagacatttgcttcttcgatcgggactacgccggctaggg
atccaacagaggtgtttctgtgcgacgcagagtgaccggggtccggacaacccgcagcag
gcagacatgatccgaaaccgggctcagatcaagcgcgtcctctgcgtagccgagaagaac
gatgcagccaaaggcatctcggagatcatgtccagcggcaggtccaggaggagggaaggg
atgtcaaagttcaataaaatctatgagtatgagtatcatctctttggtcagaatgtgaca
gtaacaatgacatcagtatcaggccatttactgggtctggagtttaaagcgccgttccag
aaatggcacagttgcaatcccgtgctgttatttgatgctgaggtggagaagtattgtcca
gataacatgctacaaatcaagcggacactagagaaagaggtgaggcagtgccaggcctta
gtcatctggactgattgtgacagagagggagaaaacatcggctttgaaatcatagatgtc
tgcaaagcagtaaagcccaatttacaagtctttcgagcaaagttttctgagatcaccccc
agctccattcggagagccagtgagactctaacagcgccagatgctaacatcagtgatgct
gtcgacgtccgtcaggagctggacctgcggataggtgcgtccttcactcggttccagacg
cttcgcctgcagaagatctttccagagtctctggccaatcagctgatctcgtacggcagc
tgtcagtttcccactctgggctttgtggtggagcgcttcaaagccatccaggctttcata
cctgagactttctataagatcaaagtgctgcatgaggtggaggaggacactgtagagttc
agctggaaaagaaaccgcctcttcaaccacacagcttgcctggtgctctaccagatatgc
atggaggatcccatagcaacagtcacctcagtaaccagcaaacccaagagcaagtggaga
ccgctgcctttggacacagtggaactggaaaagctggcatctcgtaagctacgaataaat
gccaaagagaccatgaaaattgcagaaaagctctatacccaagggtatatcagctacccc
cgtacagagacaaatatttttcctgcaaacctggctctcggccccctggtagagcaacag
acacaaagcccggtctgggggacgttcgcccagcgggtaatggaccagcctgggggtccc
aacccgcggcagggcaagaaatctgaccaagcccacccccccatacaccccaccaagtac
tccaatacactacagggcaatgaaggtcgcgtgtatgagttcattgtccggcacttcttg
gcttgcgtatcccaggatgctttggggaacgagactgtggtggaaatagacatcgcccag
gagaagttctccacctcgggactcatgatccttgcaagaaactacctggatgtttaccca
tatgacaggtggagctccaagctgattccagtgtatgagcaaggctcccagttccagccc
agcgctatcgagatggtggacggacagacgagtcctccgcagctgctcactgaagctgac
ctcatatcactgatggagaagcacggcattggcacagatgcaacccacgcagagcatatc
gagactataaagagtcgcatgtatgtgggcttgacagctgaccagaggtttctccctgga
gagctcggcatgggactggtggaggggtacaactccatgggctatgagatgtccaaacca
aacctgcgtgctgaattggaggctgacctcaagctggtatcagagggcaggaaggacaaa
cacagcgtgctgcagcactacatccagaaatacaagactgtcttcattgaatccgccaag
aaggcaaaaaagctagatgaagctctgtcgccatatctgggtgcagctcagcagatcacc
gaggcagagcagcaggacatggagatcccgctgccggtcaggaagtgccctcactgtggg
cgggacatggtgctgaagaagaagagggagggtaacagtaagtacctatcctgcgtgggc
tacccagcctgtaagaccgcagtgtggttccccgacacggtgctggaggtcagcagagat
gacagcatttgtcccacctgtcagccgcaccctgttcacatgttgaagttcacgtttcgc
aggggcagcctccctcccatgatgcctttagagtttgttggctgcatcggtggatgtgac
gagacgctaagagaggtgctggacctgaaatatctcagagcagggggagtgggaggcggt
ggaggaggtggaggaagaggagagggccctcgtccaccaggtccaaggccacccagacca
gagccacccagagccccaagatcaaatcctcaaccttcccttcctcctgtcccctcctgg
aacccccagccacgacctccaccgggtggcggtccagacaccaacagtgatgtcattgtg
tgtaactgtggtcaggatgccctcctcctgaccgtgcgcaaagatggccccaaccaaggt
cgccagttttacaagtgcaacgctgggagctgcaacttctttctttgggcagatcagcca
agtcagcagggggcaccccagagtcgagggcttccgctgcaaccaccacagacttaccag
cctccgaggccctctctggggttcagggacaactctggaggaggtagggggcaggaaggg
ggctcaggaggacatgtgggacacacgatgtgtaactgtaatgagacagcggtgacgcgc
actgttcagaaggacggaccaaacaagggccggatgttccacacctgcgggaaaccaaga
gaccaacagtgtggcttcttccagtgggctgatgagaacgaacctccaccaggtggcttt
ggtggtggatttaatggtggtggagacggcgggaagaagggaaggaagataaccggagat
accgccgctaacaaacctcctgctgctaaaaaacctcgtacctgcggcatctgccacatg
cctggtcacacccgggtcacatgtccccagcggtga
DBGET
integrated database retrieval system
