Micropterus salmoides (largemouth bass): 119881860
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Entry
119881860 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04142
Lysosome
msam04144
Endocytosis
msam05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119881860
04142 Lysosome
119881860
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
119881860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119881860
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119881860
Membrane trafficking [BR:
msam04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
119881860
Exosome [BR:
msam04147
]
Exosomal proteins
Proteins found in most exosomes
119881860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
119881860
NCBI-ProteinID:
XP_038547888
LinkDB
All DBs
Position
Unknown
AA seq
1648 aa
AA seq
DB search
MESDKFICIREKVGEQTQVVIIDMADPNTPIRRPISADSAIMNPASKVIALKDAAKTLQI
FNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGDSQPVKVFDRHSSLAG
CQIINYRTDAKQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNT
EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISSKQ
DVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATSGIIGVNRKGQVLSVCVE
EENIIPYITNVLQNPDLALRLAVRNNLAGAEELFARKFNNLFAAGNYSEAAKVAANAPKG
ILRTPDTIRRFQSVPTQPGQTSPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEK
WLKEDKLECSEELGDLVKAVDPTLALSVYLRANVPNKVIQCFAETGQFPKIVLYAKKVGY
TPDWIFLLRNVMRINPEQGLQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTSFLLDAL
KNNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTNYDRAHIAQLCEKAGLLQRALEHY
TDLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSLECLRAMLSANIRQNLQISVQVASKYH
EQLTTQALTELFESFKSFEGLFYFLGSIVNFSQDPEVHFKYIQAACKTGQIKEVERICRE
SNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPS
RLPVVVGGLLDVDCSEDVIKSLILVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGC
EEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDQEL
INVCNENSLFKSLSRYLVRRKDPDLWASVLLESNPFRRPLIDQVVQTALSETQDPEEVSV
TVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYISRLDNY
DAPDIANIAISNELFEEAFAIFKKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQ
LAKAQLQKDLVKEAIDSYIKADDPSAYMEVVQAADKSGNWEDLVKFLQMARKKARESYVE
TELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLAST
LVHLGEYQAAVDGARKANSTRTWKEVCFACVDGNEFRLAQMCGLHIVVHADELEELINYY
QDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLR
AAEQAHLWAELVFLYDKYEEFDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYKATQF
YLEFKPLLLNDLLIVLSPRLDHSRAVNFFSKVKQLPLIKPYLRSVQNHNNKSVNEALNNL
FITEEDYQALRTSIDAYDNFDNISLAQRLERHELIEFRRIAAYLFKGNNRWKQSVELCKK
DKLYKDAMQYASESKDTELAEELLSWFLQEEKRECFAACLFTCYDLLRPDVVLETAWRHN
IMDFSMPYFIQVMREYLSKVDKLETSESLRKEEEQATETQPIVYGTPQLMLTAGPSVPVA
PQQAYGYGYQAPAGYSQPAVQPGFGYGM
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgataagttcatctgtatccgggagaaggtgggcgagcagactcaggtggtg
atcattgatatggcggaccccaacacacctatccgcaggcccatctcagccgacagcgcc
atcatgaatccagccagcaaggtcattgcacttaaagacgctgccaaaacccttcagatc
ttcaacattgagatgaagagcaagatgaaagcgcacaccatgacggacgatgttaccttc
tggaagtggatctcccttaacacagttgcacttgtgactgataatgccgtttaccactgg
agcatggagggtgactcacagcctgtgaaagtcttcgaccgccactccagcctggcaggc
tgccagatcatcaactaccgcactgacgccaagcagaaatggctcctgctcatcggcatc
tcagcccagcaaaatcgggtggtgggagccatgcagctctactctgttgacagaaaggtt
tcacagcccatcgaaggccatgctgccagcttcgcccagttcaagatggaggggaataca
gaggagtcgactttgttctgcttcgctgtcagaggccaggctggagggaagttgcacatc
attgaagtggggaccccaccaactggcaaccagccatttccaaagaaagcagtggatgtg
ttcttcccccccgaagcccagaacgacttccctgtggccatgcagataagctccaagcaa
gatgtggttttccttattaccaaatatggctacattcacttatacgacttggagacaggc
acctgcatctacatgaaccgcatcagcggagagaccatctttgtcaccgctccacatgag
gccacctcaggcatcatcggggtcaacaggaaaggacaggtgctgtcagtctgcgtggaa
gaggaaaacatcatcccctacatcactaacgtgctgcagaatccagatctggctctccgc
ttggctgtccgcaacaacctcgctggcgctgaagagctctttgcacgtaaattcaacaac
ctgtttgctgctggcaactactctgaggctgccaaggttgctgccaatgcaccaaagggt
atcctgcgaaccccagacaccatccgtcgcttccagagcgtgccaactcagccaggccag
acctcccccttgctacagtactttggtatcctgttggaccaaggccagctcaacaagttc
gagtccctggagctttgcaggcctgtcctccagcaggggcgaaagcagcttctggagaag
tggctgaaggaagacaagttggagtgttccgaggaattgggtgacctggtgaaggcagtg
gatcccaccttggctctcagtgtctacctgagggccaacgtccccaacaaagtcatccag
tgctttgcagagaccggtcagttccccaagatcgtcctgtacgccaagaaggtgggctac
actccagactggatctttctgctcaggaatgtgatgcgaatcaacccagaacaaggcctg
cagtttgcccagatgctggtccaggatgaagaaccactggctgacatcacacagatcgtc
gatgtattcatggagtataacctgatccagcaatgcacctcattccttctggacgctctg
aagaacaacaggccctcagaaggaccgctgcagactcgcctgctggagatgaacctcatg
catgctccacaggttgctgatgctattttgggaaaccaaatgttcaccaactacgatcgt
gcccacattgcccagctgtgtgagaaggctggactcctgcaaagagcgctggagcactac
actgacctgtacgacatcaagcgcgctgtggtgcatacacacctgctcaacccagagtgg
ctggtgaacttctttggctctctgtccgtggaggactctctggagtgcctcagggccatg
ctgtcagccaacattcgccagaacctgcagatcagtgtgcaggtggcttccaagtaccac
gaacagctcaccacacaggctctcaccgagctctttgagtctttcaagagctttgaaggt
ctgttctacttcctgggctctattgtgaacttcagtcaggaccctgaagttcacttcaaa
tacatccaggccgcctgcaagacaggccagatcaaagaggtggagcggatctgtagagag
agcaactgctacgaccctgagcgcgtcaagaacttcctcaaggaagccaaactcaccgac
cagctgccgctcatcatcgtctgtgaccgttttgactttgtccacgacctggtcctctac
ctgtatcgcaacaacctgcagaagtacattgagatctatgttcagaaggtgaatcctagc
cgtctgcctgttgtggttggtggtctcttggacgtggactgctcagaggatgtcatcaag
agcctgatcctggttgtcagaggacagttttctactgatgaactggtcgctgaggtggaa
aagaggaacagactgaagctgctgctgccctggctggagtctcgtatccacgaaggctgt
gaggagcctgctacccataatgccttggccaagatctacattgacagcaacaacaacccc
gaacgcttcctgagggaaaacccgtactatgacagccgtgtggtgggaaagtactgcgag
aagagagacccacacctggcctgtgtggcgtatgagaggggacagtgtgaccaggagctg
atcaatgtctgcaatgagaactctctgttcaagagcttgtctcgctacctggtccgccgc
aaagaccctgacctgtgggccagcgtgctcctggagagcaaccccttcagacgaccactc
attgaccaggtggtgcagactgcactgtcagaaacccaggacccagaggaggtgtcagtc
actgtcaaggccttcatgaccgcagacttgcccaacgagctcattgagctgctggagaag
attgtgttggacaactctgtcttcagtgaacacagaaatctgcagaacctgctgatccta
acggcgatcaaagctgaccgtacccgtgtgatggagtacatcagcaggctggacaactat
gatgctcccgatatcgctaacattgctatcagcaatgaactctttgaggaggcctttgcc
atctttaagaagtttgacgtgaacacctctgcagtgcaggtgctgatcgagcatattggc
aacctggaccgggcctatgagtttgcagaacgctgcaatgagccggctgtgtggagccag
ctggctaaggctcagctacagaaggacttggttaaagaggctattgactcctacatcaaa
gccgatgatccctctgcatacatggaggttgtacaggctgctgataagagcggtaactgg
gaggacttggtcaaattccttcagatggctcgtaagaaggcccgcgagtcctacgtggag
acggagctcatctttgccttggccaaaaccaatcgcctggctgaactggaggagttcatc
aacggacccaacaatgctcacatccaacaggttggtgaccgctgctatgatgagaaaatg
tatgatgcagctaagctgctatacaacaacgtctccaactttggtcgtctcgcttcaact
ctggtgcacctcggggagtaccaggctgctgtggatggcgcccgtaaggccaacagcacc
cgcacctggaaagaggtgtgcttcgcctgcgtggatggaaatgagttcagactggcccag
atgtgcggtctccacatcgtggtgcacgctgacgagctggaggagctgatcaactactac
caagaccgcggttactttgaggagctgatcaccatgttggaggccgctctgggcctggag
cgcgctcacatggggatgttcacggagctggccatcctttactccaagttcaagccccag
aagatgagggaacatctggagctcttctggtccagagttaacatcccaaaggtcctgaga
gcagcagagcaggcgcacctgtgggcagagctggtcttcctgtacgacaagtatgaggaa
tttgacaacgccatcatcaccatgatgaaccacccgacagatgcctggaaggagggacag
ttcaaagacatcatcaccaaggtggccaacgtggagctgtactacaaagccacccagttc
tatctggagttcaagcccctgttactgaatgatttgctcatagtgctttcccccagactg
gaccactcccgtgctgtcaacttcttcagcaaggtgaaacagctccctctgatcaaaccc
tacctgcggtcagtacagaaccacaacaacaaatcagtcaatgaagcacttaacaacctc
ttcatcacagaagaggactatcaggcactgaggacatcaatagatgcctacgacaacttt
gataacatctcactggcccaacgcctggagaggcacgagctgattgagttcaggagaatc
gctgcctacctcttcaagggcaacaaccgctggaaacagagtgtggagctctgcaagaag
gacaagctctataaggatgccatgcagtatgcgtcagagtccaaggacaccgagctggca
gaggagctgctgtcctggttcctacaggaggaaaagagagagtgtttcgccgcctgcctg
ttcacctgctatgacctgctacggcctgacgtggtgctggagaccgcctggaggcacaac
atcatggacttttctatgccatacttcattcaggtcatgagggagtacctcagcaaggta
gataaactagaaacctcagagtccctaaggaaagaggaggagcaggcaacagagacgcaa
cccatcgtctatggcacaccacagctgatgctgacagcaggccccagcgtacctgtggcc
ccccagcaagcttacggctacggctaccaggctccggcaggatacagtcagccagcagtg
cagccaggctttggctacggcatgtaa
DBGET
integrated database retrieval system
