Micropterus salmoides (largemouth bass): 119881877
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Entry
119881877 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-3a-like
KO
K04659
thrombospondin 2/3/4/5
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04145
Phagosome
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
msam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119881877
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119881877
09144 Cellular community - eukaryotes
04510 Focal adhesion
119881877
09142 Cell motility
04820 Cytoskeleton in muscle cells
119881877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119881877
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119881877
00536 Glycosaminoglycan binding proteins [BR:
msam00536
]
119881877
Membrane trafficking [BR:
msam04131
]
Endocytosis
Phagocytosis
Opsonins
119881877
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119881877
Exosomal proteins of colorectal cancer cells
119881877
Exosomal proteins of bladder cancer cells
119881877
Glycosaminoglycan binding proteins [BR:
msam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119881877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
EGF
Motif
Other DBs
NCBI-GeneID:
119881877
NCBI-ProteinID:
XP_038547895
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MGWSFPVLLSVLCVRLTAGVPDGPDVQVIDVLSLQDSKQSVAAVEKLSTGLSALSDVYVV
STFRLPAKLGGVLLGLYSKQDNRKYLEVAIMGKINKVLVRYVRADGKLHTVNLQNANLAD
GRTHSIILRLGGLHRDNMHMELYVNCRLADSSQGLPPLVPLPREAEMVEIRHGQKAYARL
QGAVESLRLALGGSVAKAGALTDCPFQGDSSAYNSVSGEVNSILGDHTKALIGQLIIFNQ
ILGELRQDIREQVKEMSLIRNTILECQVCGFHEPRSRCSPNPCFKGVACVESLHYPGYTC
GPCPPGTTGNGTHCTDIDECELQPCFSPEACVNTVXGFSCQPCPPGLWGEPLAGTGLNFA
KTHRQDCVDIDECLDLPDACVPNSVCINTVGSYKCGGCKPGFLGNQTSGCFPRKSCAALT
FNPCDFNAHCVMERNGEVACMCNVGWAGNGNTCGVDTDIDGYPDRPLPCMDNDKHCKQDN
CVFTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSDSDSFGDACDNC
PNVPNSDQKDTDSNGQGDACDQDIDGDGIPNVLDNCPKVPNPMQTDRDRDGVGDACDSCP
ELSNPMQTDVDNDLVGDVCDTNVDTDGDGHQDSRDNCPDIPNSSQLDSDNDGLGDDCDHD
DDNDGVLDDYDNCRLIVNPNQKDSDVNSVGDVCENDFDNDAVMDLIDVCPESAEVTLTDF
RAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTV
TDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSLPFRANAQPAMQLKAVKSRTGPGEFLR
NALWHTGDTAXEAKLLWKDPRNVGWKDKTSYRWQLSHRPQVGYIRVKLFEGTDMVADSGV
VIDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTVPEDFQSHRKQVLMHIQV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgggttggagttttccggttctgctctcagtcctctgcgtccgactcacggcgggggta
ccggacggtccggacgttcaagtgatcgacgtgttgagtcttcaggactcgaagcagagc
gtcgctgcggtggagaagctgtcgaccggtctgagcgcgctcagtgacgtctacgtggtg
tcgacgtttcggctgccggccaagttgggcggcgtcctgctgggcctctacagcaaacag
gacaacaggaagtacctggaggtcgccatcatggggaagatcaataaagtcctggttcgt
tacgtcagagctgacgggaagctccacaccgtcaacctgcagaacgccaacctggccgac
ggccggacccactccatcatcctgagactgggcggccttcaccgtgacaacatgcacatg
gagctctacgtcaactgcagactggcggactccagccagggcctgccgccgctggtccct
ctgcccagagaggcggagatggtggagatcaggcacgggcagaaggcctacgcccgacta
cagggcgccgtggagtccctcagactggctctaggaggcagtgttgctaaagctggagct
ctgacggactgtccgttccaaggagactcatcagcctacaactcagtgagcggggaggtg
aactccatcctgggtgatcacaccaaggctctgattggtcagctcatcatcttcaaccag
atcctgggagagctgcgacaggacatccgggagcaggtgaaagagatgtctctgatcaga
aacaccatcctggagtgtcaggtttgtggtttccacgagcctcgctctcgctgctctcct
aacccgtgctttaagggcgtggcctgtgtggagagtctgcactatcctggatacacctgt
ggaccctgcccacctggaaccaccggcaacgggacgcactgtaccgacattgacgagtgt
gagctgcagccttgtttctctcctgaagcctgtgtgaacactgtgngggggttctcctgt
cagccctgccctcctggcctgtggggggagccgctggctggaactggactgaacttcgcc
aagacgcacagacaggactgtgtagatattgatgagtgcttagatctaccagacgcctgt
gtaccaaactctgtgtgcatcaacactgtgggctcttataagtgtggaggctgtaaacct
ggtttcctcgggaaccagacgtcaggttgcttccccaggaagtcgtgtgccgcgttgacc
tttaacccctgtgacttcaacgcccactgcgtcatggagaggaacggcgaggtcgcctgc
atgtgtaacgtgggttgggccggtaacggtaacacatgtggagtggacacagacatcgac
gggtatcccgaccgccctctgccctgcatggacaacgacaaacactgtaaacaggacaac
tgtgtgtttacgcctaactccggtcaggaggacgccgacaacgacgggatcggagatcag
tgtgacgaggacgcagacggagacggcatcaagaacgtggaggataactgccggttggtc
cctaacaaagaccagcagaactcagacagcgactcgttcggagacgcctgtgataactgt
cccaacgtccccaacagcgaccagaaggacacggacagcaacggacagggagacgcctgc
gaccaggacatcgacggagacgggattcccaacgttctggataactgtccaaaggtgccg
aacccgatgcagacagacagagaccgagacggagtgggagacgcctgcgacagctgtcct
gaactcagcaaccccatgcagacggacgtcgacaacgacctggtgggagacgtttgtgac
accaacgtggacacggacggagacggccaccaggacagcagagacaactgtcccgacatc
cccaacagctcccagctggactccgacaacgacggcctcggagacgactgtgaccacgac
gacgacaacgacggcgtcctcgacgactacgacaactgcagactcatcgtcaaccccaac
cagaaagactctgacgtgaacagtgttggagacgtctgcgagaacgactttgataacgac
gccgtgatggatttgatcgatgtgtgtccagagagcgccgaggtcactctgacggacttt
agagcctatcagacggtcatcctggacccagagggcgacgcccagatcgaccccaactgg
gtggtccttaatcagggcatggagatagtccagacgatgaacagtgatcctggtctcgct
gtgggctacacggcgtttaacggcgtcgacttcgagggaacgtttcacgtcaacacggta
actgacgacgactacgccggcttcatcttcgggtaccaggactcctcgagtttctacgtg
gtgatgtggaaacagacggagcagacgtactggcagtcgctgcccttcagggccaacgcc
cagcccgccatgcagctcaaggcggtgaagtctcggaccggacccggggagttcctgagg
aacgctctgtggcacaccggagacacagctngggaggcgaagctgctctggaaggatcca
cgaaacgtcggctggaaggacaaaacctcttatcgctggcagctcagccaccggccgcag
gtgggctacatcagggtgaagctgtttgaggggacagacatggtggcggactctggcgtg
gtgatcgacaccacgatgagaggaggccggcttggcgtcttctgtttctcccaggaaaac
atcatctggtccaacctgcgctacagatgtaacgacacggtgcctgaagacttccagtcg
catcgtaaacaagttctgatgcacattcaggtgtga
DBGET
integrated database retrieval system
