Micropterus salmoides (largemouth bass): 119881903
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Entry
119881903 CDS
T07309
Name
(RefSeq) vacuolar protein sorting-associated protein 13C-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119881903
Membrane trafficking [BR:
msam04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119881903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_VAB
WWE
APCDDC
Motif
Other DBs
NCBI-GeneID:
119881903
NCBI-ProteinID:
XP_038547905
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MDLEYSVFEPSSRGKLSALQRQESCLFHLTIVPSGYSEISNIAVDKPGRRLYNIRSPLIP
EAVSVLLQIDAAEGNKVITVRSPLQIKNHFSVPFTILMYCPKSRSLQSVGQAEPEKEFHI
ALETYRCQLFVRPAGRLEAQYGPSSTCVAWKEQVHRSSEVRSVLQCPAADSSLLPLMVST
LAVPDDLRHIASHGEEDWYPAYVIHLHPVATLRNLLPYTVRYLMENSADTYELQEGSTSD
LLNARVSGEIMSLVLMRYQGRDWHGHLRVEQEMPEFFAVCLTCDSDTNVTVDVSVHVTRT
ASRLLLSLFSPYWIINKTSRVLQYRAEDVSFKHPADCRDIFLFSFRKKNLFSKNKLQLCV
STSSWSEGFSLDTVGSYGCVRCPANNMDFLVGVSIQMSSFNLTRIVTMSPFYTLVNKTSY
ELEVGEVTSQTSTRWHYIATTECLPLWPENTSGKLCVRVVGSESTSKYFFFNRQDNGTVL
SLDMCGGIIVDVNISDLATIISFSDYYDGAAPALLVNHTPWVTISYRQSGSAMDHQLQPN
EARRFAWDDPASARTLSWSSGGHSGELDLLKDEVGQFSYDNLSQIHWVSFLDGRQRVLLF
TEDVAVVTKARQAEELEQFQQEVKVSLQNLGLSLINNSSRKEIAYIGITSSGVVWEMKPK
NRWKPFNQKNIILLEETYQRQLSGKTEGGWVKLQTNLEVNLSGVTMMMRQPFSCQVRRNF
LSGIQVEYKQSLHQRSLRAQLHWLQVDNQLPGAIFPIVFHPVPPPKSIALDSEPKPFIDV
SIITRFNQYSSVMQFKYFMALVQEMAVKIDQGFLEAIVAVFTPAADPQADRQKSRLLERD
LQLLQSELTEVSLTDASGLSFFEHFHISPIKLHLSLSLGSSGGNSSQGTVSVESLNLLLK
SIGATLTDVDDLIFKLAFFEVKYQFYSREKLMWAVVRHYSEQFLKQMYVLVLGLDVLGNP
FGLIRGLSEGVEAFFYEPFQGAVQGPEEFAEGFVIGVRSLLGHTVGGAAGVVSRITGSVG
KGLAAITMDKEYQQKRREEMNRPPRDFGESLAKGGVGLLKGVMGGVTGIVTKPVEGAKKE
GAAGFFKGIGKGLVGVVARPTGGIVDMASSTFQGIQRAAESTEEVT
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggacctggagtactctgtgttcgagccgtcatcacggggcaaactgtcagctctgcag
cggcaagagagctgcctgttccacctcaccatcgttccctccggatacagcgagatctcc
aacatcgctgtagacaaaccgggtcgacgtctctacaacatccgtagtccgttgataccg
gaggcggtctctgtgctgctgcagatcgacgctgcagagggcaacaaggtcatcactgtc
cgttcgccgctgcagataaagaatcacttctctgtgccgttcaccatcctgatgtactgt
ccaaagtccaggagcctgcagagcgtcggacaggccgaacctgagaaagagtttcacatc
gccttagaaacatacagatgtcagctgtttgtacgtccggcgggtcgtctggaggctcag
tacggtccgtcctccacctgcgtggcgtggaaggagcaggtgcaccgcagctcggaggtg
cgttcggtgctgcagtgtccggcggccgacagcagcctgctgccgctgatggtcagcacg
ctggctgtccccgacgacctgcgacacatcgccagccacggagaggaagactggtacccc
gcctacgtcatccacctccaccctgtggccacgctacgcaacctgctgccctacaccgtc
cgctacttgatggagaactcagcagacacttacgagcttcaggaaggaagcacgtcggac
ctcctgaacgctcgtgtctcaggtgagatcatgtcgttggtgctgatgaggtatcagggc
cgcgactggcacggacatcttcgtgtcgaacaggaaatgccggagttctttgccgtgtgt
ctcacgtgtgactcggacaccaacgtgacggtggatgtgagcgttcacgtgacgaggacg
gcgagccgcctgctgctgtcactcttcagcccgtactggatcatcaacaaaacttctcga
gtgctgcagtacagagcagaggacgtcagcttcaaacacccggccgactgccgagacatc
ttcctgttctctttcaggaaaaagaacctcttcagcaagaacaagctccagttgtgtgtg
tccaccagctcctggtctgaaggtttctctctggacaccgtgggaagttacggctgcgtt
cgctgtccggctaacaacatggacttcctggtgggcgtcagtatccagatgagcagtttt
aacctgaccaggatcgtcaccatgagtccattctacactctggtcaacaagacgtcctat
gagctggaggtgggagaagtgaccagccagacctccaccaggtggcactacatcgccacc
acagagtgcctccctctgtggccggagaacacttcggggaagttgtgtgtccgtgtggtc
ggatctgaatccacctccaagtacttcttctttaaccgacaggacaacggcaccgtgctg
agcctcgacatgtgcggtgggatcatcgtggatgtcaacatctccgatctcgccaccatc
atcagcttcagcgattactatgacggagcagctccggccctcctggtcaaccacacgccc
tgggtcaccatcagctaccggcaaagcggctcagcgatggatcaccagctacaacccaac
gaagcccgacgctttgcgtgggacgacccagccagcgcccgaacgctcagctggagctcc
gggggacattctggagagctggacctgctgaaggatgaggtgggtcagttctcctacgac
aacttgagtcagatccactgggtttcctttctggacggacgccagcgggtactgctgttc
accgaggacgtcgccgtggtgacaaaagctcggcaggccgaggagctggaacagttccag
caagaagtaaaggtgtcgctacagaacctgggactgtccctgatcaacaacagcagccgg
aaggagatcgcttacatcggcatcaccagctcaggtgtggtttgggagatgaagccaaag
aatcgctggaagccgttcaatcagaaaaacatcatcctgctggaggaaacataccagcgt
cagctgagcgggaagaccgaggggggctgggtcaaactgcagaccaacctggaggtgaac
ctcagtggtgtgaccatgatgatgcgtcagccgttttcctgccaggtgaggaggaacttc
ctgtctgggatccaggtggagtacaaacagtcactgcatcagcgtagtctgagggcccag
ctgcactggctgcaggtggataaccagctgccaggtgccattttccccatcgtcttccac
cctgttcctcctccgaagtccatcgctctggactcagagccgaagccgttcatcgacgtg
tccatcatcaccaggttcaaccagtacagcagtgtcatgcagttcaaatacttcatggct
ctggttcaagagatggcggtgaaaatcgatcagggtttcctggaagccatcgtggctgtg
ttcacacctgccgctgacccccaggccgacagacagaagtctcgcctgttagagagagat
ctgcagctgctgcagtccgagctgacggaggtgtcgctcaccgacgcttcaggactcagc
ttcttcgaacatttccacatctcccccattaagcttcatctcagtctgtctctgggctcc
agcggtgggaactcgtctcaggggacagtgtccgttgagtctcttaacctgctgttaaaa
agtatcggtgccacgctgaccgacgttgatgacctcattttcaaactggccttcttcgag
gtgaagtaccagttttacagcagagagaagctgatgtgggcggtggtccggcactacagt
gagcagttcctgaagcagatgtatgttctggttctgggtctggacgtcctgggaaacccg
tttggactgatccgaggtctgtctgagggagtggaggccttcttctacgaacctttccaa
ggggcagtccagggtccagaggagttcgctgaaggttttgtgatcggagtccgtagcctg
ctgggtcacactgtcggtggcgctgcaggggtggtttccaggatcacggggtcagtgggt
aaaggtctggcagccatcaccatggataaggagtaccaacagaaacgacgagaggagatg
aaccgaccgcctagagacttcggagagagtctggctaaaggaggagttggactgctgaag
ggagtcatgggtggagtaacaggcatcgtcaccaaacctgtggagggggcgaagaaggag
ggcgcagcaggtttctttaagggcatcgggaaaggtctggtaggcgtggtggcccggccg
acaggcggcatcgtggacatggccagcagcaccttccagggcatccagagagcggcggag
tcgacagaggaagtgacc
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