Micropterus salmoides (largemouth bass): 119882039
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Entry
119882039 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04144
Endocytosis
msam04520
Adherens junction
msam04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119882039
09144 Cellular community - eukaryotes
04520 Adherens junction
119882039
04530 Tight junction
119882039
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msam01009
]
119882039
Protein phosphatases and associated proteins [BR:
msam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119882039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
119882039
NCBI-ProteinID:
XP_038547984
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
TKPDSIIRLLPAHPTGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRL
LEVNGVDLNGRTQEEVVSLLRATPMGGAVGLLVLRQEDTFLPREVNAEPQVQCPRDLHPR
QPVTAGKPHWLIEKTEEDDLVLTPDGTREFLTFEIPLSDSGSAGLGVSVKGNRSKENHAD
LGIFVKSIINGGAACKDGRLRVNDQLIAVNGESLLGKTNHDAMETLRKSMSTEGNKRGMI
QLIVARRVAKGNQEAPGSPLGPQTLNTSLDDHERRISHSLYGGLEGLDDNLMPRQGMMPR
TIGNYQLSPTVNMPQDDTVIIEDDRQPLFPPHLSDQSSSSSHDDVAFTADVTPPWAKELP
SQIESSLSPDENHPDAAFQREGFGRQSMSEKRTKQFGDATQLEIIKTRKSKSMDLVADEI
NLTPRPETNTGSSTKDVGPSLGLKKSSSLESLQTAVAEVTLNGDLPFHRPRPXIIRGRGC
NESFRAAIDKSYDRPAATEEDDEGMETLEEDTEESSRSGRDSVSTVADQTPLSGSEKPLV
NGTNRTKEEKKKDKDKGGKEKKPDGGKEKDKGKAKKGMLKGLGDMF
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gacgaaaccagattccatcataagactccttcctgctcatcccacaggccctgagggact
cggcttcagtataacgtcacgggacgttcccatcggcggctcggcacccatctacgtgaa
gaatattctgcctcggggagctgccatccaagatggccgcctcaaggcaggagacaggct
gctggaggtgaatggagtggacctgaatgggcggacccaggaggaggtggtgtctctgct
cagggccacgcccatgggcggggctgttgggctgctggttctacggcaggaggacacttt
cctcccacgagaagtgaatgctgagccccaggtgcaatgccccagagatttgcatccgag
gcagcctgtgacagccgggaaaccccattggctgattgagaagacagaggaggacgactt
ggtcctgactccagacgggaccagagagttcctgacctttgagatccccctcagtgactc
aggttcagctgggttgggtgtgagtgtcaaaggtaatcgctccaaggagaaccacgctga
cctgggcatcttcgtcaaatcgattattaatggaggggcagcctgcaaggacgggcggct
tcgagtgaatgaccagttgatagctgtcaatggagagtcgctattgggcaaaaccaacca
tgacgccatggagacgctgcgcaaatccatgtcaacggaaggcaacaaacgtgggatgat
ccagctcattgtggccagacgagtggccaaaggaaatcaggaggcaccagggagcccact
gggacctcagactttgaacacctctctggacgatcacgagcgccgaatctcccactcttt
gtacggtggcctggagggcctcgatgacaacttgatgccacggcaaggcatgatgcctcg
cacaataggaaactatcagctctcaccgaccgtcaacatgccgcaggatgacactgtgat
catagaggatgaccggcagcccctcttcccaccccacctctctgaccagtcatcatccag
ctcccacgacgatgtggctttcactgctgatgtgacgccgccgtgggccaaagagctgcc
cagtcagattgaaagctccctgagtccagatgaaaatcatccagacgccgctttccagag
ggaaggctttggacgccagagcatgtcagagaagcgcaccaagcagtttggagacgcaac
tcagctcgagatcatcaagacacgcaagtccaagagcatggatctagtagccgacgagat
taacctcacccctcgtcccgagaccaacacaggttcttccacaaaagatgtgggaccatc
actaggcttaaagaagtccagctctctcgagagcctccagacggctgttgccgaggtaac
cctcaatggggacctccccttccacaggccgcgacccngtataatcagggggcggggctg
caacgagagcttcagagcagccatcgacaaatcctacgaccgaccagctgcaacggaaga
agatgatgagggcatggagacattggaggaggacacagaggagagttcacgatcagggag
agattctgtgtccactgtggccgaccagaccccgctgtccggctctgaaaaacccctggt
caacggcactaatcgcaccaaagaggagaagaagaaagacaaagacaagggagggaagga
gaagaagccagatggagggaaggagaaagacaagggaaaagccaagaagggcatgctgaa
aggactcggggacatgttcag
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