Micropterus salmoides (largemouth bass): 119882291
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Entry
119882291 CDS
T07309
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119882291 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119882291 (dhx36)
03012 Translation factors [BR:
msam03012
]
119882291 (dhx36)
Enzymes [BR:
msam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119882291 (dhx36)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119882291 (dhx36)
Translation factors [BR:
msam03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119882291 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NB-ARC
AAA_14
PhoH
DUF7428
AAA_16
NACHT
Motif
Other DBs
NCBI-GeneID:
119882291
NCBI-ProteinID:
XP_038548220
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MSYGYGGGGGRGRRGGRGYRDGSKERWDRGGGGGSRGQSSDFDQDRGGGGQRDRPPPHLK
GREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNDQPDPWRDGRDARA
STSGNWSTSANRGGHCYFDGDEPEEDKQKIEVKSVEEEETISPGQEKAIHKSQRYFSPAV
AKDEPPDTWDEEEQQEEGKEKLRKTDKDLEFLFQEVVRDSSLDDSLKRDLRSKKSDPKYK
EMLKFREKLPSYGKKEELVELINSNRVVVVSGETGCGKTTQVTQFILDDYINRGMGSMCR
VVCTQPRRISAISVAERVASERAESVGNGNSCGYQIRLQSRLPRRQGSVLYCTTGIILQW
LRSDPFLSSISHLVLDEIHERNLQSDVLLVIVKDLLNLRDDLKVILMSATLNAEKFSRYF
DNCPMIHIPGLTFPVEEFLLEDIVEMTRYRPQNPDRRPSWKRGFLQGRNSRPEKEEKEAE
YKESWPCYARTLQGRYSDNTIEVLEMLDNDEKIDLELILALIRHIVLKDEEGAILVFLPG
WDNISSLNDLLMAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETS
ITIDDVVYVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVRPGKCYHLYNG
LRASLLDAYQLPEIMRTPLEELCLQIKILKLGFIAHFLEKALDPPSEKAVNLAIKNLIDL
NALDRAENLTALGVHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGK
EKMADMRRKVLSRNSKSDHLTIVNAFQGWEEAKQRGARYEREYCWDNFLSANTLQMLHNM
KGQFAEHLMHAGFVSSRDPKDPKSNVNSDNEKLIKAVIVAGLYPKVAMIRPSHSKKRPGV
KVYTQADGKVCIHPKSVNAEETEFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDI
TIQKDEDQETIAVDQWIVFRSPARIAHLVKSLKKELDSLLEEKIRNPAPVDWQNRQSKDC
AVITAIIDLITTQEKPTGSTKGYGRTWESAPRGRHMYFNDDEDDDDD
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggatatggcggtgggggtgggagaggcaggagaggaggtcgagggtacagg
gatggaagcaaagaaagatgggacaggggaggtggaggaggctcgagaggacagagttcc
gactttgaccaggaccgaggaggaggtggacagcgggaccgtcctcctccacacctaaag
ggccgtgagataggtctgtggtacgcaagatacggagccgtgaggaggaaacaggctgac
cggagatcgcgggcagtggtccagatggatgaagccagagagcagcacattaccaagctg
cttaactcggtccaaaatgatcagccagatccatggagagacggcagggatgcaagagct
tctacatctggaaactggtcgacatctgccaatagaggcggtcattgttactttgatggg
gatgaacctgaagaggataaacagaagatcgaggtcaaatctgtggaagaggaggaaacc
attagtccgggccaggagaaagcaattcacaaatctcaacgttacttctctccagcagtc
gctaaagatgagcctccagacacatgggatgaagaggagcagcaggaggaggggaaagag
aaactgaggaagacagacaaggatcttgagttcttatttcaggaagtagtcagagacagt
tcattggatgactccttaaagagagatctgcggagcaagaaatcagatccaaagtacaaa
gaaatgttgaaattcagggaaaaactaccatcttatgggaaaaaagaggagctggtggag
ctgatcaactcgaaccgtgtcgtggtggtgagtggagaaacggggtgtggaaagaccact
caggtcacccaattcatcctagatgactatatcaacagaggcatgggctcgatgtgtcgg
gtggtctgcacgcagcctcgtcgcatcagtgccatctcagtagcagagcgtgtagcatca
gagagggcagaaagtgtggggaatggaaattcttgtggttaccaaatccgcctgcagagc
cggttaccacggagacaaggttcggtcctgtattgcacaacaggcattattcttcagtgg
cttcgctcagacccatttttgtccagtatcagccacctggtgctggacgagatccatgag
aggaacctgcaatctgatgttttgctcgtcattgtgaaggacctactcaacctccgagat
gacctcaaggtcatcctcatgagtgccacgctcaacgcagagaagttttcaagatatttt
gacaattgtccaatgatccacatccctggtttgactttcccagtggaagagttcctcctt
gaggacattgtggagatgaccaggtatcgtccccagaatccggaccgtcggccctcgtgg
aaaagaggctttttgcaagggcgcaactccagacctgagaaggaggagaaagaggctgaa
tacaaggagagctggccttgttatgcacgcacactgcagggcagatactctgacaacacc
attgaggtactagagatgttggacaatgatgagaagattgacctggagcttatcctggca
ctgattcgccatattgtgcttaaggatgaggaaggagcaatcttggtcttcctgcctggc
tgggacaacatcagcagtctcaatgacctgctcatggctcagcagatgttccgatcagac
cggtttgttatcatccctttgcactccctcatgcctaccgttaatcagacgcaggtgttc
aaaaggcctcctcctggagttagaaagattgtgattgctaccaatatagctgagaccagc
atcaccatagatgacgttgtttatgtgatagatggaggcaagattaaggagaccaacttt
gacaccaacaacaacatcagcactatgacagcagagtgggttagcctggccaatgccaaa
cagaggaaaggacgtgccggcagagtgcgtccagggaagtgctatcatctgtacaacggt
ctcagggccagcctgctggatgcctatcaattacctgaaatcatgaggacaccactggag
gagctctgcctgcagatcaagatactgaagcttgggtttatagctcatttcctggagaag
gccctggaccctccctctgaaaaggccgttaacctggccatcaagaacctcatagacctg
aacgccctggaccgtgccgagaatctgaccgctctgggtgtccacctggctcgtctgcct
gtggagcctcacattggcaaactcatcctttttggggctctgctgggctgcctcgaccca
gtactcaccattgctgcttcactcagcttcaaagaccccttcttcatacccctgggtaaa
gagaagatggcagacatgagaagaaaggtcctttctagaaactccaagagtgaccacctc
actattgtcaatgccttccagggctgggaagaagcaaaacagcgaggtgccaggtatgag
agggagtactgctgggacaacttcttgtctgccaatacactccagatgctgcacaacatg
aagggtcagtttgctgagcatctaatgcatgcaggctttgtcagcagcagggaccccaaa
gaccccaaatctaacgtcaactcggacaatgagaagttaatcaaggcggtgattgtagct
ggtctgtacccaaaggtggccatgatcagaccatctcatagcaaaaagaggccaggggtt
aaagtgtacacccaggctgacggaaaggtgtgtatccacccaaaatctgtcaatgctgaa
gagacagaattcaactatacatggctcatctaccacctcaagatgagaacaagcagcatc
ttcctgtacgattgcaccgaggtgtccccgttctcactgctgttctttggaggagacatc
acaatccagaaagacgaagaccaggagactatcgcagtggaccagtggatcgtcttcaga
tccccagcacgcatcgctcaccttgtcaagagtttaaagaaagagttggattctctgctg
gaggagaaaattcgtaaccctgctcctgtggactggcaaaaccgtcagtctaaagactgt
gctgtcatcacagccatcatagacctcatcaccacccaggagaagcctacaggcagcact
aagggctatggcagaacatgggagtctgccccaagaggacgacacatgtacttcaatgat
gacgaagacgacgacgatgattag
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integrated database retrieval system
