Micropterus salmoides (largemouth bass): 119882315
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Entry
119882315 CDS
T07309
Symbol
nectin1b
Name
(RefSeq) nectin cell adhesion molecule 1b isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03266
Virion - Herpesvirus
msam04514
Cell adhesion molecule (CAM) interaction
msam04517
IgSF CAM signaling
msam04520
Adherens junction
msam05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
119882315 (nectin1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119882315 (nectin1b)
04517 IgSF CAM signaling
119882315 (nectin1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119882315 (nectin1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119882315 (nectin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
msam04515
]
119882315 (nectin1b)
04090 CD molecules [BR:
msam04090
]
119882315 (nectin1b)
Cell adhesion molecules [BR:
msam04515
]
Immunoglobulin superfamily
Nectin family
119882315 (nectin1b)
CD molecules [BR:
msam04090
]
Proteins
119882315 (nectin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
Ig_2
I-set
ig
Ig_PVRIG
HPIP
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
119882315
NCBI-ProteinID:
XP_038548249
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MAMCVGMWILLLALHVQAGNGQMVQMDPSKSGFVGSQVELRCIFINSNPPVKISQVTWQK
LLNGTKQNVAIANPALGVSVLSPFKERVSFKQAAVRHRTPSLEDTTIMFSNLQLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPMTRMTLTTPTIVARAQKRKMTVATCVSANGKPPSVI
KWDTRLKGEATFQETRNQNGTVTVRSNYVVIPSRETHRQKLTCIVTYQSEKITDSVVLNV
QYEPEVKIEGFDGNWYLNRQNVQLTCRADANPPVTIYQWKLLNGSLPSNVEIKNNTLFFK
GPVTYDLAGTYVCDATNGIGTRTGTVDVNITEKPMPQGPPGGVIGILGGVVAIGLIIGVA
VTVFMVHRRQQKTRTETDNDLTDLPPAHKPAPPPPKKKNSDMKGHLTSDDIQVVHLDKEE
EMQKLPLQPPYYDMAPSESTPFTDKPDSGRHPEELLNPAEYMSYQRVCNMEHFPESQSAP
TYPPVTFLPQHPYTQHPPTEPMYSNTSFPAAGPRAPFTFPKEQSV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtgtgtggggatgtggatactcctgttagcactgcatgtccaagctggcaac
ggacagatggtacagatggaccccagtaagtctggctttgtgggttcacaagtggagctg
cgctgcattttcatcaacagtaacccgccagtcaagatctctcaagtcacctggcagaag
ctcctcaacggcaccaaacagaatgtggccattgccaacccagcactcggtgtgtctgtt
ctctcacccttcaaagagcgggtcagcttcaagcaggcagcggttcgtcatcgtacaccc
tcgctggaggacaccaccatcatgttctccaacctgcagctgtctgatgaagctgcttac
atctgcgagtatactacatttcctgcaggcaaccgggagaacatggtcaacctgactgta
tttgctcggcccatgacacgtatgactttgacaacgcccacgattgtggccagggctcag
aaacgcaagatgactgttgccacttgtgtgtcagccaatgggaagccaccaagtgtgatc
aaatgggacaccaggttgaaaggcgaagccactttccaggagactcgcaaccaaaatggg
acagtgactgtacggagcaactatgtggtgataccgagccgcgagacccacagacagaag
cttacgtgtattgtgacgtaccaaagtgaaaagatcacagacagcgtggtgctgaatgtg
cagtatgaacctgaggtgaagatcgagggctttgatggaaactggtacctgaaccgtcag
aatgttcagctgacctgcagggctgatgctaacccccctgtcacgatctaccagtggaaa
ctcttgaatggctccctgcccagtaatgtggagatcaagaacaacaccctgttctttaag
gggccggtgacctacgacctggccggtacgtacgtctgtgacgctaccaacggtatcggg
actcgcactggcaccgtggacgtcaacatcacagaaaagcccatgccgcagggtccccca
ggtggtgttatcgggatccttggaggtgtcgttgccattggactcatcattggcgtggct
gtaacagttttcatggtccatcggcggcagcagaagacccgcactgagacagataatgac
ctgaccgacctcccacccgcccacaaaccagcccctcccccacctaaaaagaagaacagt
gacatgaaaggacacttgacatccgatgacatccaggtggttcatctcgacaaggaggag
gaaatgcagaagcttcctcttcaacctccttattacgacatggcgccctcagagtcgacc
cccttcactgataagccggactctgggaggcacccagaagagctgttgaaccctgctgaa
tacatgagctaccagcgcgtctgcaacatggaacacttccctgagtctcagtccgctcca
acctatcctcctgtcactttcctgccccagcacccctacacacagcacccacccaccgag
cccatgtactccaacacgagcttccctgccgctggccctcgagctccattcacgttccct
aaggagcaatccgtgtaa
DBGET
integrated database retrieval system
