Micropterus salmoides (largemouth bass): 119882367
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Entry
119882367 CDS
T07309
Symbol
nup88
Name
(RefSeq) nucleoporin 88
KO
K14318
nuclear pore complex protein Nup88
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119882367 (nup88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119882367 (nup88)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119882367 (nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
HTH_32
Bcr-Abl_Oligo
PqqD
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
119882367
NCBI-ProteinID:
XP_038548309
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MAAFSGERWLNDLPNHAIFKNIREKLDLEANANERGVAKNLTFCLGGDFFVWDDADRVFY
TTNLRQLNSDESRSSGNYQALLCINPPLFEVCQVLLSPTQHHVALVGQRGVSVLELPQRW
GKRSEFEGGRSEINCKTIPVAERFFTSSPSVKLRQAAWYPSETDEPHLVLLTSDNTIRFY
GLKSPQTLTKVLPVSQSEDDSSVHHPVRSYAASLGEIAVAFDFGPISSPHRKLAAQCSKE
QLVYPLYILYENGETYVSYTSQANGVSLSKPVGPLPMYPAAEDNYGYDACAILCLPCVPS
ILVIATETGTLYHCVVLESDEEDETGAVEKWIRGTEAVPALYVFECVELELTLKVATGED
EEPQEFDFTCPIRLHRDPLCEHRYHCTHEAGVHSVGLIWVNKLQKFLRSDEEDKDSIQEL
AAEKRCIVEHILCTRPLLTNRSAPIRGFLIVSDLSLGATMICITSTYECILLPLLSSIRP
PSPPLLCSHPGPGSGSSPLRGLADDSFEQHIRNILVRSSTNPLVLKAGDKDTSPPPPECL
QLLSRATQVFHEEYILKQDMAREEMQRRVKLLTGQKKKQLEELSLCREERMSLREAAERL
ADKYEDAKYRQETIMNRVKKVLGSLQSQLPILSNSEKDMKRELQTIGDQLKHLDNLIRQV
KMKMEYQKKQVDKDVPAARTTVSLNAHQKKVVQDVIREQGQQIGDMMKQIKDIKNHFSF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggcattcagcggtgaacgatggctaaatgatttaccaaatcatgcaattttcaaa
aacatacgagagaagttggacttggaagctaacgcaaatgaaaggggggtcgctaaaaac
cttaccttttgtttgggtggggactttttcgtgtgggacgacgccgaccgcgtgttttac
acgaccaacttgcgacagctaaactcggatgagagtcgcagtagcgggaactatcaagca
ttgctgtgcattaaccctcctcttttcgaagtgtgccaagtgctgctaagtccaacgcag
caccatgtcgcgctcgtcgggcagcgaggcgtctcggtgctggagctccctcagcggtgg
ggcaagaggtccgagttcgagggcggaaggagcgaaatcaactgcaagaccatcccggtg
gcagagcgcttcttcaccagctcaccgtcagtgaaactgcggcaggcggcttggtacccc
agcgagaccgatgagccccacttggtgctgctcacatccgacaacaccatcaggttttac
ggcttgaagtcgccccagacgctgaccaaagtcctgccagtgtcgcagtcggaagatgac
agcagcgtccatcatccagtccgttcatatgcagcatctctaggcgagatagcagtggcg
tttgactttgggccgatttcgtccccccatcggaagctggcagcacagtgctccaaagaa
cagctggtctaccctctgtacatcctctacgaaaatggggagacgtatgtgagctacacg
agccaggcaaacggcgtgagtctaagtaaacccgttggaccccttccgatgtatcctgca
gcagaggataactatggctatgatgcttgtgccattctctgcctgccatgtgtgcccagc
atcctggtcatcgctactgaaacaggcacgctgtatcactgtgtggtgctggagtctgat
gaagaggatgagacaggggcagtggagaagtggatccggggaacagaggcagtgcctgct
ctctatgtatttgagtgtgttgagctagagctcacccttaaagtagccacaggagaggat
gaggagcctcaagagtttgatttcacctgtccaatcagactgcacagagaccccttgtgt
gagcacaggtatcactgcacccacgaagcaggagtgcacagtgtgggtctaatctgggtc
aacaagctgcagaagttcctgcggtcagatgaggaggataaggacagtatccaggagctg
gctgctgagaagcgctgtattgtagaacacattctttgtaccagaccacttctaaccaat
cggtcagctccaattcgtggctttttgattgtgtctgacctttccttgggcgccactatg
atctgcattaccagcacctatgagtgcatccttttgcccctgctgagctccattcgccct
ccctctcctcccctgctttgttcccatccaggtccaggctctggaagctcccctctgcgt
gggctggctgacgactccttcgagcagcacatccgcaacatcctggtacgtagctctacc
aatcctctcgtacttaaggctggggacaaggacacgtcaccaccacctccagagtgtctg
cagctccttagcagagccacacaggtcttccatgaggagtacattctcaagcaggacatg
gcccgtgaagagatgcagagaagggtaaaactcctgacaggtcagaagaaaaagcagctg
gaagagttgtctctgtgcagggaggagaggatgagtctgagagaggcagcagagaggctg
gctgataagtacgaagatgcaaagtatcgtcaggaaaccatcatgaacagggttaaaaaa
gtgctgggcagcctgcaaagccaactacccatactgtcaaacagtgaaaaggacatgaag
agggagctgcagaccattggcgatcagctgaaacacttggacaacctcatcagacaggtg
aagatgaagatggagtaccagaagaaacaagtggacaaggatgtgcctgcagccaggaca
acagtttcactcaatgcccaccagaagaaggttgttcaagatgtgatccgcgaacaggga
cagcaaattggtgacatgatgaaacagatcaaagacatcaaaaaccatttcagtttctaa
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integrated database retrieval system
