Micropterus salmoides (largemouth bass): 119882406
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Entry
119882406 CDS
T07309
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msam02000
]
119882406
03037 Cilium and associated proteins [BR:
msam03037
]
119882406
Transporters [BR:
msam02000
]
Other transporters
Pores ion channels [TC:
1
]
119882406
Cilium and associated proteins [BR:
msam03037
]
Other cilia and associated proteins
Stereociliary proteins
119882406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
119882406
NCBI-ProteinID:
XP_038548356
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MSTVSEPLVGSSRSLSAAKRHKSIRKNSRRIYSAYQDHHEGSSDDEDKEDERVDSNDPEE
MFQNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLKYEGRLTRTRGYQTAGADLLKKL
SRVLYNIVVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFIVLPELL
AGAPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGRVRKIGSAGYRLPLA
YFLVGMAVFAYSFIILLRKMAKNSRLSLASASDENFTFCWRIFCAWDYLIGNPEAAESKG
AAIVNNIREAIVEEQEKKKDTSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQ
EKPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYS
LIIALLDKVNSMSSAVPVNPGNWSDSSSFLATISQSEVDSLSTLVSGISEHHNSTIAMVL
DVTNSGRSSSGTVSNQTVLFEKNTRSQQDQCWETYVGQEMLKLSIIDMIFTVASILLIDF
IRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLK
LIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRPSQHC
GPFSGQEKIYDIISETVASDFPLWFSKVMSYITSPVVVLPALLLLFMLIYYLQAIARSLK
FTNNQLRMQLQTERTEDKKKVFQIAAARLQAPEAAVDKKPDQQDSDITSQEASIHTPSPR
RNGSVTNFQSPVRRGTSIRTIAQSASRSELNRGRMAGSVRSPTVTILPKPRLEHGPNRPP
QFLGGPSGACRSKSYHHMAYNPPAHYSDNIHSDPLYRKTIRSIRPVEATGIVTAQSYGGR
RGHTTRYLIVNEHEPRKKLVRSATRIPRHYLMEEPAEILELYPRNIKRYTPRTTHHQPHP
QLSHLSQQHLSEEEEEEDQGKGRRRMSLGKAHRPCSLSDLHHLAHFYIGDRVESHASMAK
DSHTARGRYGVQEDNEEEDGEVEIDWGDLESQSRSQANVKGADPLLVRTRRHIHSPGRHC
QSPARTRHMESHVKPKARPKLETPLTESDSASVASSSDQQNSSTDQYIQVIHNKERYLKC
DARRGKLAKTSKTSFDLNVNESNDLVCSNV
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtgtctgagcctttggttggcagcagcaggtctctgtctgcagccaagaga
cataaaagtatcaggaagaactccagaaggatttattcagcctaccaggaccaccacgag
ggctcctctgatgatgaagataaagaggatgagcgggtggacagcaatgacccagaggag
atgttccagaacattcagtatcagaaggagatcattgccaacattcggaccagaccctgg
ccaatgagacgcaagctcaaagtgttaaagcaggccagagagattgttctgaagtatgag
ggccgactgaccagaaccagaggttaccagactgcaggagctgatctgctgaagaaactc
tcccgtgtgctttacaacattgtggttctgttcattccctgggaagtgaggatcaagaaa
attgaaagtcactttgggtcgggcgtggcctcctacttcatcttcctccgctggttgttt
gggatcaatatcgtcctcaccatcatgactggagccttcatcgtcctacctgagctgttg
gctggagctccatttggaacaacgaggagtaaaactatccccaaggagcatctggcttca
gcccaggacctggacaccatctggtctcttgggggctacctgcagtactcggtgttattc
tatggttactatggcagggtgaggaaaattggcagtgcagggtaccggttgcccctcgcc
tacttcctggttgggatggctgtctttgcctacagtttcatcattctgttaagaaaaatg
gccaagaactctcgactaagcctggccagtgcctctgatgagaatttcacattctgctgg
cgaattttctgtgcatgggattacctaatcggaaacccagaggctgcagagagcaaagga
gctgccattgtcaacaacatcagggaagccattgtcgaggagcaggaaaagaagaaggat
accagtctggcagttctgatcagtctgcgtatcttagccaacatcctggtgctgctgtct
ctggccggcagcatctacatcatctactttgtggtggaccgttctcagaaactagagcag
gagaagccagagctgacgctgtgggagaagaacgaggtgagtgtggtggtttctctcatc
accatgattgcgccgtctgcctttgagctggttgctcagctcgagatgtaccacccacga
acgtcgctgcgattccagctggccagagtgcttgttttatacctggggaatctctacagc
ctcattattgccctccttgataaggtcaacagcatgagctctgctgtcccagtgaatcct
ggaaactggtctgactccagctccttcctggctaccatctctcagtctgaggtagacagc
ctctccaccctggtttctgggatctctgagcatcacaacagcaccatcgccatggtgctg
gatgttactaacagtggcaggagcagctcagggactgtctccaaccagacagttctgttt
gaaaagaacacccgctctcagcaggaccaatgctgggagacctacgttggacaggagatg
ctgaagctgtccatcattgacatgatcttcacagtggccagcatcctgctcattgacttc
atcagaggtttggttgttcggtacctgagtgactgctgttgctgggatttagagagcaag
tttcctgaatatggagaattcaaaatagcagagaatgttttgcatctgatatataaccaa
ggaatgatctggatgggagcatttttctctccttgtcttcctgccttcaacgtgttaaag
cttattggtctgatgtatctgaggagctgggctgtcctcacctgcaatgttccccatcag
caggtgttccgagcctccagatcaaacaatttctaccttgctatgctgcttttcatgctg
tttctgtgtatgctgcccaccatctttgccatagtgagatacagaccgtcgcagcactgt
ggaccattcagtggccaagagaagatttatgacatcatctctgagacagtggccagtgac
ttccccctgtggttcagtaaagtgatgagttacattaccagccctgtcgtcgtgctgcct
gcactgcttctgctgttcatgctgatatactatctccaggccattgccagatccctcaaa
ttcacgaacaaccagctgaggatgcagctccagactgagcggactgaggataagaagaaa
gtcttccagatagctgcagcgagactgcaggctccagaggctgcagtggacaaaaagcca
gatcagcaggacagcgatatcacgagccaggaggcctccatccacactccatctccccgg
cggaatggtagcgtcacaaactttcagtctcctgttcgccgcggaaccagcatccgcacc
atcgcccaatcagcttctcgctcggaactgaacagaggaaggatggctggatctgtcaga
agtccaacagtaaccatactacccaaacccaggctggagcatggacctaacaggccccca
caatttcttggtggccctagtggggcctgcaggtccaagtcctaccaccacatggcgtac
aatcccccagctcactattctgacaacatccactctgaccccctgtacaggaagaccata
cgctccatacgtcctgtcgaggctactgggatcgtcactgcacagagttatggtggacgg
cgtggtcataccacccgctatttaattgtgaatgagcacgagccaaggaagaagctggtg
cgctcagccacacggatcccacgccattacctcatggaggagcctgcagagatcctggag
ctgtacccacgcaacatcaaacgctacacaccccgcaccactcaccaccaaccacatcct
caactgtcccacctatcacagcagcatctgagtgaagaggaggaggaggaggaccaggga
aaaggcaggagaaggatgtcattggggaaggctcatcggccctgttccctctctgacctc
caccacctagcacacttctacatcggtgaccgcgtagagagccatgcgtccatggctaaa
gacagccacactgctcgaggaagatatggagtgcaagaagataatgaagaggaggatggt
gaagtagaaatagactggggagatttagagtcacagtcccggtcccaggccaatgtgaaa
ggagcagaccctcttcttgtgcgaaccaggcgtcacattcattccccaggaagacactgt
cagtccccagccaggaccaggcacatggagtctcatgtgaagcccaaggcgagaccaaag
ctggagacccctctgaccgagtcagactccgcctccgtggcctccagcagtgaccagcag
aacagcagcactgaccagtacattcaagtcatccacaacaaggagcgctatctcaagtgt
gatgccaggcgtggaaagctggccaaaacatccaaaaccagttttgatttaaatgtcaat
gagtcaaatgacctggtctgctccaatgtatga
DBGET
integrated database retrieval system
