Micropterus salmoides (largemouth bass): 119882485
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Entry
119882485 CDS
T07309
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04010
MAPK signaling pathway
msam04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119882485
04020 Calcium signaling pathway
119882485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119882485
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119882485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119882485
NCBI-ProteinID:
XP_038548454
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MNYIILYCVMTLTSSSTWLDNVYILIVLLNCVTLGMYKPCEETNIILEVLEDLTFAFSMV
EMLIKMVALGVFGYEGSYFSNNWNKFDFFINLAKMLEFILATFGIRIPICQALRPIQLIG
RVSSMRDMVSVLLNTVPMLTNFLLLYLFVIHIFSVVGVELWAGQLLNRCFLGEDIPAMYN
VSLSPYYKSKNDEYFPFICSPADKHGMLHCHDVPAYKKDGKTCSLAAPHHVSSLNELVPT
GAGASANACVNWNLYYNVCRAGDHNPHLGAVNFDHIAYAWLAIFQVVTMEGWMEIMFYVM
DCYSFWSFIFFILVTIMGSFILMNVCAVVIATQFSLSMERKKGQPRADAVFITMLCDKLT
CWLRRISSRCNRHRNKVHPKSRAGNLKRSLLAQAWIPIKKTAERTVNSKLFDRVIMFTVS
LCILTMVIEHHGEPEEMIRVLQISNLIFTIIFAVEAVLKLLALTWKYFTDRHNVFDFVIV
IVSLWELIVKTDGRLSVLRAFRLLRFVKLVHFFPYLKKQLQVLTSTMKGAAPLCGLLLFV
IFVFRHFKDSDWMFSFLCSVLGMQLFGCKLKFKTPDGVIIPDRKNFDTLSWSMVTVFQLL
TLEDWNLVLYKAMAATSPWAALYFIAVNIFGKHVFLNVLVGIVVENFQAKRSSSSDQATS
SPPNNLSPSQTENKKNDPSAPDQDCSFSHPGPSRSTVINSAPKEDSAPVDSDGDNRSLNL
IQKVRRWCKEHEEWSFYVLSPENRFRICCHRVISHKMFDRIILLFILLNCVTITFEMPGI
DPKSMERWLLDFSSDLFSAIFLVEMLVKVLAFGLIIGKQSYFRSSWNMVDGFLAILSLAH
FIIILVSTADDHMLAILKVLRLIRTLRPLRVIKRAPKLKLAVDALMASVKPIRNILLICC
AFFFFYGILGVQLFRGKFYYCVGEDIRNITTKIECLAANYLWVRRKYNFDNLLQALMSLF
VMFSKDGWVNIMYDGLDAVGVDQQPVRNHNEWMLLYFISFMIISFLLLDMFIGVMVETFH
QCQQNHKRTDGELLEEGGKVQCNKPAQIPYYAHYSYIRRAIHSLCSSSFLDLFMTVIIVI
SVVIMAVQHYNQPPYIGKITEYSFYVVTFIMITEVLLKLVAFGIWRFIKIRWNLLDVAVL
VVSIVSIVLHQINMTDIVPINPSILRVCRIFRLVRVLKLKKLRVLLKTIIKTLSQVGNIC
LLFTFFFYIYAAVGVELYGKLACNDDHPCLGLQDEVNFRHFGVALITLYGLCTGDNWNVI
LKDTLRECHPGEHDCLRYLSWVSPLYLISFVVMAQFVLVNLVVASIMQALEDTKEEEELH
GANRLLGRATDPAPPTSTQRDPHSHEDLLVLRSNL
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgaattatatcatattatattgtgttatgaccttaacctcttcctccacgtggttggat
aatgtgtacatactgatagtcctgcttaactgtgtgactctgggcatgtacaagccctgt
gaagagacgaacatcatcctagaggtattggaggatttaacttttgctttctccatggtg
gaaatgctcatcaagatggtggccctgggagtctttggctatgaaggaagttactttagc
aacaactggaacaagtttgacttcttcatcaacttggcaaagatgttggagtttattctg
gctacttttgggatccgcataccaatctgtcaggcactcaggccaatacaactgatcggc
agagtatcaagcatgcgagacatggtgtcagtcctcttgaacactgtgccgatgcttaca
aattttctcctcctctacctctttgtcatccacatcttctctgttgtgggagttgagctg
tgggcggggcagctgctcaaccgctgcttcctgggtgaagacattcctgcaatgtacaac
gtgtccttgagtccatactacaagtccaagaacgatgaatatttcccatttatctgttcg
cctgctgacaagcatgggatgttacactgccatgatgttccagcttacaaaaaggatggg
aaaacctgctcattggctgcaccccaccatgtttcatctctgaatgagttagtccctacg
ggggctggggccagtgccaacgcctgtgtgaactggaacttgtactacaatgtctgtcgc
gctggggaccacaaccctcacttgggagccgtcaactttgatcacatcgcctatgcctgg
ttagctatattccaggttgtcacgatggaaggatggatggagatcatgttttatgttatg
gattgttattccttctggagtttcatatttttcatactcgtcaccattatgggctccttt
atcttgatgaacgtgtgcgcagtcgtcatcgccacccagttctctttgagtatggaaagg
aagaaaggacagcctcgtgctgacgctgtgttcatcactatgctctgtgacaagttaacc
tgctggctgcggaggatctccagtagatgcaacagacatcgtaacaaggtgcacccaaaa
agcagggcaggcaacttgaaaaggtccttattggctcaggcctggatacccatcaagaaa
acagctgagaggaccgtcaacagtaaactctttgaccgagtgatcatgtttactgtttcc
ctctgtatacttaccatggtcatagagcaccacggggagcctgaggagatgatccgtgtg
ttacagatcagtaacctcatcttcaccattatatttgctgtggaggctgtcttaaagctg
ctggctctcacgtggaaatactttacagaccgacacaacgtctttgactttgtcatcgtt
atcgtcagtttgtgggagctaattgttaaaactgatggcaggttgtcagttctgcgggca
tttcgcctgctgcggtttgtgaagttggttcacttcttcccttacctgaagaaacagctg
caagtgctgactagtaccatgaaaggggcagccccactctgtgggctactgttgtttgtc
attttcgtttttagacatttcaaagattctgactggatgttctcgtttctttgcagtgta
ctgggtatgcagctgtttggttgtaaactgaagttcaagacaccagacggagtcatcatc
cctgaccgaaaaaactttgacaccctgagctggtccatggtcacagtgttccagcttctg
actctggaggactggaatctggttctatacaaagccatggctgctacctccccatgggcc
gctctctactttattgcggtcaatatctttggaaaacatgtttttctcaatgttcttgtg
ggcatagtggttgagaacttccaggccaagcgctcctcaagttctgatcaagccaccagc
tcccctccaaacaacttgtcaccttcacagacagaaaacaagaaaaatgacccctcagcc
cccgaccaagactgctctttctctcaccctgggcccagcagatccactgtgattaactca
gcccccaaggaagactctgcacctgtagattctgatggggacaatagatctttgaacctt
atccagaaagtgcgccgctggtgcaaagagcatgaagagtggtcgttctacgtgttgtct
ccagagaacaggttccgtatctgttgccatcgtgtgatctctcacaagatgttcgaccgc
ataattctgctcttcattctcctgaactgtgtcaccattacttttgagatgcctggcata
gaccctaaaagcatggagcgatggttgctggatttctctagtgatctattctctgctatc
ttcctggtagagatgcttgttaaggttctagcttttggtttgataattggaaagcagagc
tacttccggtcttcctggaatatggtggatggtttcttggcgattctgtctttagcccac
ttcatcatcattctggtcagtacagctgacgatcacatgctggccatcctcaaagtgtta
cgcctaatacgcacacttcgcccactgagggtgatcaagcgagctccgaaactgaagctg
gctgttgatgctctaatggcctcggttaaacccatcaggaacatccttctcatttgctgt
gccttcttcttcttctatggtatccttggggtgcagttgttcagagggaagttctactac
tgtgtgggcgaggacataagaaacatcaccaccaagattgaatgcctggcggccaactat
ctctgggtacgaaggaagtacaacttcgacaacctgcttcaggctctgatgagcttgttt
gtaatgttctctaaagatggctgggtgaacatcatgtatgatgggctggatgctgtggga
gtggaccaacagcctgtgaggaatcacaacgaatggatgctgctctactttatctccttc
atgattataagcttccttctgctcgacatgtttattggtgtaatggtggagaccttccac
cagtgtcagcagaatcataaaagaactgatggagagttactagaagagggaggaaaagtc
cagtgcaacaagcctgcacagattccatattacgcacactactcctacatacgtcgagct
attcattctctgtgtagcagcagcttcttggacctcttcatgactgtcatcattgtcatc
agtgttgtgataatggctgtccaacattacaatcaacctccgtatatagggaagattaca
gagtattccttctatgtggtcaccttcatcatgatcactgaagtcctgctgaagctcgtg
gcgtttggcatatggaggttcataaaaatcagatggaatctgctggacgttgctgtactc
gtggtttccatcgtcagcatcgttttgcaccagatcaatatgacagacatagttcccatt
aatcccagcatcctgagagtttgtagaatattcagactagtacgagtcctgaagctcaaa
aagctacgagttctgctaaaaaccatcataaagactctttcacaggttggaaatatttgt
ctgctcttcacattcttcttttacatctacgctgcggtgggagtggagctctatggcaag
ctagcatgcaatgatgaccacccgtgcctgggtttacaagatgaagtcaacttcagacat
tttggggtggccctgatcacgctgtacggcctatgcaccggagacaactggaacgtgatt
ttgaaagacacactaagagaatgtcatcctggtgagcatgactgtttgagatacctttcc
tgggtctcaccgttgtacctcatcagtttcgtggttatggcccagtttgtgctggtgaac
ctggtggtcgcatcgatcatgcaagcgctggaggacaccaaagaggaggaagaattgcat
ggcgctaaccgtctcctggggagagcgacagacccagctccacccacgtcaacgcagagg
gaccctcatagtcatgaagatttacttgttttaaggagtaatttatag
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