Micropterus salmoides (largemouth bass): 119882548
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Entry
119882548 CDS
T07309
Symbol
atm
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03440
Homologous recombination
msam04068
FoxO signaling pathway
msam04110
Cell cycle
msam04115
p53 signaling pathway
msam04210
Apoptosis
msam04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119882548 (atm)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
119882548 (atm)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119882548 (atm)
04210 Apoptosis
119882548 (atm)
04115 p53 signaling pathway
119882548 (atm)
04218 Cellular senescence
119882548 (atm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
msam01001
]
119882548 (atm)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msam03032
]
119882548 (atm)
03036 Chromosome and associated proteins [BR:
msam03036
]
119882548 (atm)
03400 DNA repair and recombination proteins [BR:
msam03400
]
119882548 (atm)
Enzymes [BR:
msam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
119882548 (atm)
Protein kinases [BR:
msam01001
]
Serine/threonine kinases: Other
PIKK family [OT]
119882548 (atm)
DNA replication proteins [BR:
msam03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
119882548 (atm)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
119882548 (atm)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
Check point factors
Other check point factors
119882548 (atm)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
HEAT_ATR
DUF2200
Motif
Other DBs
NCBI-GeneID:
119882548
NCBI-ProteinID:
XP_038548532
LinkDB
All DBs
Position
Unknown
AA seq
3103 aa
AA seq
DB search
MSLALHDLLICCKGLENDKATERKKEAERFRRLLRTPEVVQELDRTSGPKAKGGSKQLTW
DAVFRFLQRYVQKETESMQSSKSNVTATTLAMRKKKIAQMCSLIKYFIRYANKRGPRLKC
SELLKHVMEVLQSSYCCSAYGEDYSSLLIKDILSVRKYWCDITLQQWHSLLDLYCGFFNS
SSKSINRVLVSRVIHTVVQGCCMQTDGYNNALFSFFSKALLNARQEKHLTVLEHLISALN
IFLRSAAMNCRMRVCLLGEELLPSILYVWADMRPSAVLKEEIVDFFNLQICAHHPKGAKT
QDTGAHAEDWTRWRSLLYNLYDALIREISQIGSRGKYVTGTRHIAVKDNIIELTADICHQ
LFSDDNDTHVLEVTQASLRATRMSSPTHGTASKRRRIELGWEVLRDHLQPQHNDFDVIPW
LQITAVLTSKFPSMVPGQELVPLLSVLYQLLAEQRKGERGPYVLRSLKEVARCQARYPER
AQVYRTELGRLWGRVWALALRGVSSPQTEALSLDLLSSIVHGGLINMDREFWKLFSGSAC
KPSEGAALCLAQALLKCPVPKSLISSSSWDYVGVTEGSASPNLKETLIAWLLMTDQSDEM
EDSSRPHPIICRDFPYNVIANILVSLTLKDTRTGLKFLLGTEGVESAFSQEQTLSNAKDN
LEEIERLYLQFSFNTLPSAIRGTDESVKTASTDGQFAAIPGLRNKLEQSLLCVADNLLKC
YSPDSQVTPPHCLVRCVNLLTGVLTGYVSTGFLTEEEACRSQLFTKAKALAQDICGFVSG
VKVKMTEEGTMSTLRSVMKLCTQSARRKNKDNICPISSSLFTMILPASLLSELAEICKLL
LNNVSKRVSVVDEDNHMDDDWDMSRTHQGDDIDLFDDGEESHSSANGTQRQKGDNGDAPC
APGAKSLLADDHLAHQDLALLAVLEFLCECGSVQPVHGLLFKPQEVRRRLLLLVEQIDFD
KALHLCMYLVLLEKLPAEDSLSPEEFDSLLRPLADLCSQYRQDQEICAAVLLGLLPTVRS
LGKTHHVPEEMRHVQGSLLQVVSGFCFLIQTGKCMAAVRAALVRCLVALLEADPCCKWAV
LNIRGPDREEGHPVSAILPSHLADTHHQVRMLVAMSVERLFLEMRPEDPDKRKMLPLRHQ
QAAFEAVYLKAQEGMKLPKSSSSEDQQDEAFNRKAALLKSLSVVMCCSPVCEKQSLFALF
QSYKENNIEEQLIKKMLCCVSKALGYRNVKTFVTSHLYYLVAEWLAQRQSDDRYTLGSFP
YTLLDHDTVKEFYNSSYQVLIPHLVFLDDFEQVKSIGRYLEKDWRGLLADCFPKIMVNIL
PYFALPGQDAQVAQQREKAHRVYDLLKDANCLGKQQIDNLIHSNLADIVVELLMTLYEGS
GAEGDREDLKRFIGELDPAPNPPYFSSYVIKATLDYLSKCHSANHKSLVAILSKTPISIQ
RILLAVCERAAETTNSYERHRILLMYHLFVNLLLREVKDGLGGAWAFVLRDIIYTLIHHI
NGRLVDTYTHRPVQCDEVSNRSLALCCDLLTSVCRAALQFCDDALDCHLQVIIGTLTAQV
TSQPAISKQVLSLLQFLVIENQQKLKGAISRLEPFPDLPEFRELRSVQHRLKYNTGTFTL
RQEIAHFLSVMSCDSLPLTRLEGLKELTRQLHDNKGQIRELLKECHADPTNSVLVKLILS
LLQLCKLAANHPGGADILEAAGSCLGELGPVDFSTIALLHGRDPLYEKAMSLFTSTESQC
IYIILNCMNDALTQQRIEVRKEAAQCVKNILATQSGVDFWEQHKDNRDPMLAYLNPFRKA
KKEVAAVGAEESSEAREKLESQEFWIPQAGGHKAWLKALCTALLDSRGVRNEALLLTRPL
CLVSVDCCQKLLPLIIHSILLDDCNGPWRQLLSSHIQDFFSFCSRSAQASSRSATPLNSD
SESDSASQGLHDKTSLRTMLAVIDYLRHQQRPLESDSNSCGTVCDSNFWLELNYLEVAKA
AQSCSAHFTALLYTEIYVDKIKANMEASRRTKSRASRKINFEENSQNFTISSLTEKSMED
TNISLQELLIEVYRSIGEPDSLYGCGGETMTSPLTRIRTYEHEAMWGKALTSYDLHSTLP
EVTRQVGIVEGLQNFGLSSILATYMRGLESEGVEWGAELRELRFQAAWRNTQWDCEVSER
SEKSTPGYHESVFCALQALRDKEFSLFDETMKQARGAEVEDLCRGSLEAVSSLYPALRNL
QSVRELESVKQLFSRPFSDLTLREVCSQWQQHSQLLVDSDFALVEPVLAVRSVSQQTLMS
RVGDPDSTQYLSSVLTDHLMELCRLARRAGNTQLAERAVFQMKQHGGGGSSWTSFPLSSW
KLEEAQVFWAKGEQGLALGLLRQMIHNLEEKVDLNPALAPVYTECLRLCGNWLAETCLES
PGVILEKYLERAVEVIEGESGVQDPRLQSQRTEAFLSLARFSDAQYQSIDKYMNSSEFEN
KQALLEKAKEEVDLMRERKVTSNRYTIKVQRELELDEKALSNLQADKQRFLCKAVENYIQ
CLEEGEEHDTWVFRLASLWLENADVKAVNDMMKRGVKQIPSYKFLPLMYQLAARMGTKMA
NGITEDTGFHVVLSDLICRASLEHPHHTLFIILALVNANKDENFCRTRLSKSAPRQPSPF
DLERSDVAQKIINVIRKKRGEMIRGIERLCDAYITLAYMDASKHKTEKKAIPIPADQPIM
QIKDLDEVVIPTMEIKVDPSGCYDNLVTVRSFMPHYHLAGGVNLPKIIDCVGSDGKSRRQ
LVKGQDDLRQDAVMQQVFSMCSMLLQRNTDTRKRKLNIRRYKVVPFSQRSGVLEWCSGTV
PIGEFLVDPNKGAHKRFRPGDWTNLACRKKMMEAQRLAYDEKLQAYSEVCKSFRPVFRYF
CMERFLDPAVWMEKRLAYTRSVATSSIVGYIVGLGDRHIQNILIDEQTAELVHIDLGVAF
EQGKILPTPETVPFRLSRDIVDGMGITGVEGVFRRCCEKTMEVMRSSQEALLTIVEVLLY
DPLFDWTMNPLKAFYLQHDEQQELNATLSSTMGGDDIDNHRKSSDSQSFNKVAERVLLRL
QEKLKGVEEGTVLSVGGQVNLLIQQAMDPKNLSRLFPGWQAWV
NT seq
9312 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggctcttcatgatctcctgatctgctgcaaggggctggagaatgacaaagca
acagagaggaagaaagaagctgagcgcttcaggcggctccttcgaactccagaggttgtg
caggagttggatcgaacttcaggacccaaagctaaaggaggttccaagcaactcacatgg
gatgctgttttcagatttctgcagcggtatgtccagaaggagacagaaagcatgcaatca
agtaaatccaacgtcacagcaactactctggccatgcggaagaagaagattgctcaaatg
tgcagcttgatcaaatacttcattcgctacgcaaacaaacgcgggccccgtctcaagtgc
agtgagctgctgaaacatgtgatggaggtcctgcagagttcgtactgctgttcagcctat
ggagaagattatagcagcctcctaataaaggacatcctctccgtccgcaagtactggtgt
gacatcactcttcagcagtggcacagtcttctggacttgtattgtggcttctttaactct
tcatccaagtccatcaaccgtgttctggtgagcagagtcatccacacggtggtgcagggc
tgctgcatgcagactgatggatacaacaacgctctgttcagcttcttctccaaagcactg
ttaaatgcaaggcaggagaaacatctgactgttttggagcacctcatctcggctctcaac
atcttcctgagatccgcagccatgaattgtcggatgagagtgtgtctcctgggagaggag
cttctgccttctatactgtatgtctgggcggatatgaggccctctgcggttctcaaagag
gagattgtggatttctttaacctgcagatttgtgctcaccaccccaaaggagccaagaca
caagatacaggtgctcatgctgaggactggaccaggtggcgaagtctgttgtacaacctg
tatgatgcgttaatcagagaaattagtcagataggcagcagagggaagtacgtcacaggg
acccgacacatagctgtcaaagacaatatcattgagctcacagctgacatctgtcaccag
ttgttcagtgatgacaatgacacccatgtcttggaggtgactcaagcctccctcagagcc
acccgcatgagcagtcccacccatggaacggccagcaagcgacggcgcatcgaactgggc
tgggaggtcctccgggaccatctgcagcctcagcataatgacttcgatgtcataccatgg
ctgcagatcactgcagtgctcacctctaagttcccgtccatggtgcccggccaggagctt
gtcccgctgctgtccgtgttataccagctcctggcagagcagcggaaaggagagaggggg
ccgtacgtgctgcgctctttgaaggaggtggcccggtgccaggcccgctacccggagagg
gcccaagtttacaggacggagctgggcaggctgtggggtcgggtgtgggccctggcactg
cgaggggtcagctcgccccaaacagaggccctcagcctggacctgctgagctctattgtt
cacggtggcctgatcaatatggacagagaattctggaagctcttctctggatcagcatgt
aaaccgtctgagggtgctgctctctgtctagcccaggccctgctaaaatgtccagtccct
aaaagtctcatctcaagctcaagctgggactatgtgggggtcacagagggatctgcttca
cctaacctgaaggagactctcatagcatggttgctgatgaccgatcagagcgatgagatg
gaggatagctccagacctcaccctatcatttgcagagactttccttacaatgtaatagca
aacatcctggtctccctgaccttgaaagacacgagaacaggcctgaagtttctgctgggt
actgaaggagtagaaagcgccttttctcaagaacaaaccttatccaatgccaaagacaac
ctggaggagattgagaggctgtacttgcagttcagcttcaacacattgccctcagcgatt
cgagggactgacgagtcagtgaagacggcttcaaccgacggccaattcgctgccatcccc
ggcctcagaaacaagttggagcaatccctgctttgtgtggctgacaacctactcaaatgc
tactctcctgattctcaggtcacccctccacactgtctagtgcgctgtgtcaatctgctg
actggtgttctaacaggttacgtctccactgggtttttgactgaggaggaggcctgccgc
tcacagctcttcactaaagccaaggctctggcccaggacatctgcggttttgtttcaggt
gtgaaagtgaagatgacagaggaaggaaccatgagcacactgagatccgtcatgaagctc
tgcacacagtcagcgagaagaaaaaacaaggataatatttgtcctatctcctccagtctg
ttcactatgattctgccagccagtctcctcagtgaactggctgagatctgcaaactgttg
ttaaacaatgtttctaagagagtcagtgttgtggatgaagataatcatatggatgatgat
tgggacatgagcagaactcatcaaggggacgacattgacctgtttgatgatggtgaagag
tcccacagcagcgccaatgggacccagagacagaagggagacaacggtgacgctccctgt
gcaccaggtgcaaaaagtctgttagcagacgatcatctggcccaccaggacttggctctc
cttgcagtcttagagttcctgtgtgagtgcggctctgtccagcctgtccacggcctgctc
ttcaaaccccaggaggtgcgccgcaggctgctgctgctggtggagcagatcgacttcgac
aaagccctacacctctgcatgtaccttgtcctgttggagaaacttcctgccgaggactcg
ctctcaccagaggaattcgattcactgcttcgtcctttagcggacctgtgttctcaatac
cgtcaggaccaagagatctgtgctgctgttctgcttggtttgttacccaccgtcaggagc
ctggggaaaacacaccatgtgccggaggaaatgagacatgttcagggatctctgctgcaa
gtggtgtctggattctgtttcctgatccaaacagggaagtgcatggcagctgtacgagct
gctttagtgcgatgcctggttgccctgctggaggctgacccatgttgtaagtgggcagtc
ctaaatatccgaggacctgacagagaggaaggtcatccagtatcggccatccttccttct
cacctcgcagatacccaccaccaagtccgtatgctggtagccatgtctgtggagaggttg
tttctggagatgagaccagaggatcctgataagagaaagatgctgccgcttagacaccag
caggcggcttttgaggctgtttacctgaaggctcaggaaggaatgaagctcccaaaaagc
agctcttcagaggaccagcaggacgaggcctttaaccgcaaggccgccctgttgaagagt
ttgtctgtcgtaatgtgttgtagcccagtctgtgaaaagcagtctctgtttgccctcttc
cagtcctacaaggagaacaatatagaggaacagctcatcaaaaagatgttgtgctgtgta
tccaaagcgctgggctacagaaacgtgaaaacatttgtcacttctcacctgtactacctg
gtagctgagtggctcgcgcagagacagtctgacgatcgctacactcttggatctttcccc
tacaccctcctagaccacgacacagtcaaagagttctataactcttcctaccaggtattg
atcccccacctggtcttcctggatgactttgagcaggtgaagtctattggcaggtatctt
gagaaggactggagagggttactggcagactgtttccccaagatcatggtcaacatcctg
ccatacttcgccttgcctggccaggatgcacaggttgcacagcagagagagaaggcccac
agagtgtacgacctgctcaaagacgccaactgtctgggcaaacagcaaattgacaacctg
atccacagtaacctggcggacatagtggtggaactgctgatgactctgtatgaaggaagt
ggagctgaaggagacagagaagacctgaaacgctttataggggaactggaccccgcacca
aacccaccatacttcagctcttatgtcattaaagctacactggactacctcagcaagtgc
catagtgcaaaccacaagtctttggtagccattctgtcaaaaactccgatttctatccag
aggatcctgctggcggtgtgtgaaagagcagcggagacgaccaacagctacgaacgtcac
cgcatcctcctcatgtatcacctgtttgtcaacctgctgctcagagaggtgaaggacggc
ctgggcggagcgtgggccttcgtcctcagagacatcatctacacgctcattcaccatatc
aacggcaggttggtggacacatatactcacagaccagttcagtgtgacgaggtttctaac
cgaagcctcgctctgtgctgcgacctgttgacctctgtgtgccgtgcggctctgcagttc
tgtgatgatgctctagactgccacctacaggtcatcatagggactctcacggctcaggtg
accagccaacctgccatctcaaagcaggtgctcagtctgttgcagtttctcgtgatagaa
aatcaacagaagttaaaaggagccatcagcaggttggagccttttcctgacctccctgaa
ttcagagagctgcggtctgtacagcacaggctcaaatataacaccgggacctttacgctg
agacaggagatcgcccacttcctgtcagtgatgtcctgtgactccttacctctgaccaga
ctcgagggcctgaaggagctgaccagacagctgcatgacaacaagggacagatcagagag
ctgctcaaagagtgccatgctgaccccactaacagtgtgctggtgaagctgattctcagt
cttctgcagctctgtaagctagcagccaaccaccctggaggagccgacatcttagaggcc
gcaggcagctgtctgggagaactgggtcctgtggatttctccaccatcgccctgcttcat
ggcagagaccccctctatgaaaaggccatgtccctgttcacctccactgagtcacagtgt
atttacatcatcctcaactgcatgaacgacgcgctcactcaacagcgtattgaggtgagg
aaggaagccgctcagtgtgtgaagaacatcctcgccacgcagtctggagtagacttctgg
gagcaacacaaggacaacagagaccccatgctggcctaccttaacccctttagaaaggcc
aagaaggaggtagcagctgtgggtgctgaggagagttcagaggccagggagaagctggag
agtcaggagttttggattccccaggcgggcggccacaaggcctggctgaaagctctgtgc
accgccctgctggacagcagaggagtcaggaatgaggctctgctactgacacgaccactg
tgtttggtgagtgtggactgctgtcagaagctgctgcccctcatcattcactccatcctt
ctggatgactgtaatggtccgtggaggcaattgctctcctcgcacattcaggacttcttc
agcttttgttccagaagcgctcaggcctccagtcggtctgccacacctctcaactctgac
tctgagtcagacagtgccagccagggcttgcatgacaagacctctctccgcaccatgctt
gctgttattgactatctgagacaccagcagagaccgctggaatctgatagcaactcctgt
ggcacggtgtgtgattcaaacttctggctggagctgaactacctggaggtagccaaagca
gctcagtcctgctcagcacatttcaccgccctgctgtatactgagatctatgtcgataag
atcaaagctaacatggaggcaagtcgcagaaccaagtccagagcgtcacgtaagatcaat
tttgaagagaacagccagaacttcaccatctcgagcctgactgagaagagcatggaagac
accaatatcagtctgcaggagctgctgattgaggtgtatcggagcatcggagagcccgac
agtctgtatggctgtggcggggagacgatgaccagtccactgacaaggattcgaacttat
gagcatgaggctatgtgggggaaggccctgacttcatatgaccttcactctactctgccc
gaggtcactcgacaagtcggaatcgtggagggcctgcagaactttggcctgagcagcatc
cttgccacctacatgaggggtctggagagtgaaggggtagagtggggagctgagctaaga
gagctccgcttccaggcggcctggaggaacacacagtgggactgcgaggtgtcagagagg
agtgagaagtccacacctggctaccatgaatcagtgttttgtgccctgcaagcactaagg
gacaaagagttctccctatttgatgaaactatgaaacaggccaggggtgcagaggtggaa
gacctgtgcaggggcagtctagaggctgtgtcttctctgtacccggctctcaggaacctg
cagagcgtcagggagctggagagtgttaaacagctattttccaggcccttctcagatttg
actctgagggaagtttgcagccagtggcagcagcactcccagctcctcgttgatagtgac
tttgctttggtggagcccgttctcgccgttcgctctgtgtcccagcaaaccctgatgtcc
agagtgggagaccccgatagcacccagtacctcagctccgtgctcaccgaccacctcatg
gaactctgccggctggctcgcagggctgggaatacacagctggctgagcgggcagtcttc
cagatgaagcagcatggtggtggggggtcgtcctggacatcattccctttgtcatcatgg
aaactagaggaagcccaggtgttctgggcaaagggagagcagggactggccctgggcctg
ctgaggcagatgatacacaacctagaagaaaaggtggacttaaatcctgctctggctccg
gtctacactgagtgcctcaggctgtgtggtaactggctggctgaaacctgcttggaaagc
cctggagttatactggagaagtacctggagagggcagtggaggtgattgagggcgaatca
ggagttcaggaccccaggctgcagagtcagcggacggaggccttcctgtctctggcccgc
ttctctgacgctcagtaccagagcatcgacaaatacatgaactcctctgagtttgagaac
aagcaagcgctgctggagaaggccaaagaagaagtggacttgatgagggagcgtaaagtg
acatccaacaggtacacaataaaggtgcagagagagctggagctggatgagaaggccctg
tccaacctgcaggcagacaaacagcgtttcctgtgcaaagcggtggagaattacatccag
tgtctggaggaaggtgaggagcacgacacctgggtgttccgcctggcttcactctggctg
gagaatgccgacgttaaagctgtaaatgacatgatgaagagaggagtgaagcagatccct
tcctacaagtttctgcctctcatgtatcagctggctgctcgcatggggaccaagatggca
aatggcattactgaggatacaggcttccatgttgtcctcagcgatctgatctgcagagcg
tctctggagcaccctcaccacacactctttattatcctcgccttggtgaacgccaacaag
gacgagaacttttgcaggactcggctgtctaagagcgctccgcggcagccctcgccattt
gacctggagcgttcagatgtggctcagaaaatcattaatgtgatcaggaaaaagagaggc
gagatgatccgagggatcgagcgtctgtgtgatgcctacatcactctggcttatatggat
gccagcaaacacaagaccgagaagaaggctattcctattccagctgatcagcccatcatg
caaatcaaagacctggatgaggttgtcatccccacaatggagatcaaggtggatccatct
ggttgttatgacaacctggtgactgtcagatcctttatgccccactatcacctggccgga
ggagtcaacctgcccaagatcatcgactgtgtcggctctgacggcaagagcaggagacaa
ctggtgaagggtcaggatgatctgcggcaggatgcagtgatgcagcaggtcttcagcatg
tgctccatgctgctgcagcgcaacacggacactcgcaagaggaagctcaatatcagacga
tacaaggtggtgccgttctcacagcgcagtggcgtcttagagtggtgttctggcacggtg
cctattggggagtttctggtggatcccaataaaggagcccacaaacgcttcagacccggt
gactggaccaacctagcctgccgcaagaagatgatggaggctcagagactggcgtatgat
gagaagctccaggcctacagtgaggtatgcaagagcttcaggccggtcttcaggtatttc
tgcatggaacgattcctggaccccgcggtgtggatggagaaacggttggcttacactcgc
agcgtggccacctcgtctatagttggctacatcgtgggcctgggggacagacacatccag
aatatcctgatcgatgagcagactgctgaactggtgcacatcgatttaggcgtggccttt
gagcaggggaagatcctacccacccccgaaacggtccccttcagactgtccagagacatt
gtggatgggatgggcatcactggagtggagggtgttttcaggagatgttgtgagaagact
atggaggtgatgaggagctctcaagaagctctgctgactattgtagaggtactgctgtat
gaccctttgttcgactggaccatgaacccgttaaaggccttctacctgcagcatgacgaa
cagcaggaactcaacgcaaccctcagctccaccatggggggagatgacatagacaaccac
cgtaaatccagtgacagtcagagcttcaacaaagtggccgagcgggtgctcctgaggctg
caggagaagctgaagggggtggaggagggcacggtgctcagcgttggggggcaggtcaac
ctgctcatccaacaagccatggaccccaaaaacctcagcagactcttcccaggctggcag
gcctgggtgtag
DBGET
integrated database retrieval system
