Micropterus salmoides (largemouth bass): 119882571
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Entry
119882571 CDS
T07309
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119882571 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msam03041
]
119882571 (prpf8)
Spliceosome [BR:
msam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119882571 (prpf8)
Complex C
U5 SnRNP specific factors
119882571 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
119882571
NCBI-ProteinID:
XP_038548582
LinkDB
All DBs
Position
Unknown
AA seq
2338 aa
AA seq
DB search
MAATFPYRGVPAGMPPGVPPPAPVPDYMSEEKLQEKARKWQHLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDSEEDGPVVEWFYEHQPLKDTAKFVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
ATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSGYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaccttcccctacagaggggtccctgcagggatgccaccaggtgtaccccct
cctgcgccagtcccggactacatgtctgaggaaaaactgcaagagaaagccagaaaatgg
cagcacttgcaggcaaagcgctactcagaaaagagaaagtttggctttgtggatgctcag
aaggaagacatgccacctgagcatgtccgcaagatcatcagggaccatggagacatgacg
aacagaaagttccgccacgacaagagggtgtacctcggtgccctcaagtacatgccccat
gcagtgttgaagctgctggaaaacatgcctatgccctgggaacagatccgagatgtgcct
gtcctctaccacatcactggagccatttcctttgtgaatgaaataccctgggtcatagag
ccagtctatatcgcccagtggggcaccatgtggatcatgatgcgtcgtgaaaagcgtgat
cgtcggcacttcaagcggatgcggtttccaccttttgatgatgaggagccacctctggat
tacgctgacaacatccttgatgtggaaccactggaggcaatacagatggagctagactct
gaggaggacggtccagttgtggagtggttctatgagcaccagccactcaaagacactgcc
aagtttgtgaatggtaccacctaccgtcgctggcagttcacattgcccatgatgtccacg
ctgtaccgcctggccaaccagctgctgacggacctggtggatttcaattacttttatctg
tttgacctcaaggcgttcttcacttccaaagccttaaatatggccattcctggggggccg
aagtttgagccactggtcagggacatcaacctccaggatgaagactggaatgagttcaat
gacatcaacaaaatcatcatccgacagccgatcaggacggagtacaaaatcgccttcccc
tacctgtacaacaacttgccacatcacgtccacctcacctggtatcatacacccaacgtg
gtgtttatcaagacggaggatccagatctcccagcgttctactttgacccgctgatcaac
cccatttcacacagacactctgttaagagtcaggagcctctgcctgatgacgatgaggag
ttcgagctgcctgagtatgtggagcctttcctcaaggagacccccctctacacagacaac
acagccaatggcattgctctgctttgggcaccgagacctttcaacctccgatctggccgc
acgaggcgtgccattgacatccccctgatcaagaactggtaccgtgagcactgccctgca
ggacaaccagtgaaagtgcgtgtgtcataccagaaactgctcaagtactatgtgctcaat
gctctcaaacacagaccacccaaggcccagaagaagaggtatctgttccgctccttcaaa
gcaaccaagttctttcagtccaccaagctggactgggtggaggtgggtctgcaggtttgc
agacagggctacaacatgctcaatctgcttatccaccgtaagaacctcaactacctgcat
ctcgactacaacttcaacctgaagcctgttaagactctgacaacaaaggaacgaaagaag
tcccgattcggcaatgcctttcacctttgcagagaagtgttgcgtctcagtaagctggtg
gtggacagccacgtgcagtacagactgggaaacgttgatgcgttccagttgtctgatgga
ctgcagtacatctttgctcatgtgggacagctgacaggcatgtaccgctacaagtacaag
ttgatgagacaaatccgaatgtgcaaagatctgaaacatctcatctactaccggttcaac
actggtcctgtgggcaaaggtccaggttgtggcttttgggctcctggctggagagtgtgg
ctgttcttcatgagagggatcactccgctgttggagagatggttggggaatctgctggcc
agacagtttgaaggacgtcactccaagggtgtagccaagacggtgacgaaacagcgtgtg
gagtctcactttgacctggagttgcgtgctgctgtgatgcatgacatcttggacatgatg
cctgagggcatcaaacagaacaaggccagaaccatcctgcagcaccttagtgagtcctgg
aggtgctggaaggccaacatcccctggaaggtgcccggcctgcccactcccattgagaac
atgatcctgcgctacgtgaaggctaaagctgactggtggaccaacactgcccactacaac
cgtgagcgaatccgccgtggagccactgtggacaagaccgtgtgcaagaaaaacctgggg
agattgactcgtctgtacctgaaagctgagcaggagagacagcacaactacctgaaggat
gggccctacatcacagctgaagaggctgtagccatttacaccaccactgttcactggctg
gagagtcggaggttctcacccatccctttccctccactgtcctacaagcatgacaccaag
ctgctcatcctggccttggagaggctcaaggaggcgtacagtgtgaagtctcgtctgaac
cagagtcagagggaggagctggggctgattgaacaggcctacgacaaccctcatgaggcc
ttgtccaggatcaagcgtcacctgctcacccagagagctttcaaagaggttggtatcgag
ttcatggacttgtacagtcacctagtgcccgtgtatgatgtagagcctctggagaagatc
actgatgcatacctggaccagtacctgtggtacgaggcagacaagagacgcctgttccca
ccctggatcaaacctgctgacactgaaccaccaccactgctggtctacaagtggtgccaa
ggtatcaacaacttgcaggacgtctgggagacagcggagggagagtgcaacgtgatgctg
gagtcccgctacgagaagatgtatgagaagattgatctgaccctgctcaacaggctgctg
cgtctgattgttgaccacaacattgctgattacatgacagccaagaacaacgtggtcatc
aactacaaggatatgaaccacaccaactcctatggtatcatcagggggctccagtttgcc
tcattcattgtgcagtactacggtctggtgatggacctgctggtgctgggcctgcaccgt
gccagcgagatggctggcccacctcagatgcccaacgacttcctcagtttccaagacaca
gccacagagagcgcccacccaatccgactgtactgccgctacatcgaccgcattcacatc
ttcttcaggttctctgccgacgaggccagggatctgattcagaggtacctgacggagcac
ccagaccccaacaatgagaacatagtgggttataacaacaagaagtgctggccccgtgat
gcccgcatgagactgatgaagcatgatgtcaaccttggacgtgctgtgttctgggatatt
aagaaccgcctgcccagatcagtgacgactgtccagtgggagaacagctttgtctcagtc
tacagcaaagacaaccccaacctgctcttcaacatgtgtggttttgagtgccgcatcttg
cctaagtgccgcaccagctatgaagagtttactcacaaggatggtgtgtggaacctgcag
aacgaggtaaccaaagagaggacggcgcagtgtttcttgcgtgtggatgatgaatcgatg
cagcgcttccacaacagagtgcgtcagatcctgatggcatctggatccaccacattcacc
aagattgtgaacaaatggaacactgctctgatcgggctgatgacgtacttccgtgaggct
gtggtcaatacccaggagctcctggatctgctggtgaagtgcgagaacaaaatccagaca
cgtatcaagatcggcctcaactccaaaatgcccagccgcttccctcccgtagtcttctac
actcccaaagagttgggtggccttggcatgctgtccatgggccacgtacttattccacag
tcagacctgcggtggtccaagcagacagatgtgggtatcacccacttcaggtctggaatg
agccatgaagaagatcagctgattcctaacctgtatcgttacattcaaccatgggagagt
gagttcattgactcccagagagtttgggctgagtacgccctcaaaagacaggaggccatc
gcccagaacaggcgtctcactttggaagatttggaggactcgtgggacagaggaatcccc
cgtatcaacacacttttccagaaggacagacacacactggcctatgacaaaggctggaga
gtcagaacagatttcaaacagtaccaggtgctgaagcagaatccgttctggtggacccac
cagaggcatgatggcaaactgtggaacctgaataactaccgcacagacatgatccaggct
ctaggaggtgtggagggcatcctggaacacacactcttcaaaggcacttatttccccacc
tgggagggtctcttctgggaaaaagccagtggctttgaggagtccatgaaatggaagaag
ctgaccaatgcccagaggtctggtctgaaccaaatccccaaccgtcgcttcacgctttgg
tggtcacccaccatcaacagagccaacgtgtacgtgggtttccaggtgcaacttgacctg
acaggaatctttatgcacggcaaaatccccacactgaagatctccctcattcagatcttc
agggctcacttgtggcagaagattcatgagagcattgtcatggatctctgtcaggtgttt
gatcaggagctggatgctctcgagattgagacggtgcagaaggagaccatccaccccagg
aagtcgtacaagatgaactcatcgtgtgcagacatcctcctcttcgcgtcatacaagtgg
aacgtctctagaccatctctgcttgctgactcaaaggacgtgatggacagcaccaccacg
cagaagtactggattgacattcagctgcgctggggtgactacgactcgcatgacatcgag
cgctacgccagggccaagttcctggactacaccactgacaacatgagtatctacccctcc
cccaccggggtgctcattgctatcgacctggcttacaacctccacagtggctatggtaac
tggttccctggaagcaagcctcttatccagcaggccatggccaagatcatgaaggccaac
cctgccctgtacgtgctcagggagcgcatacgcaaaggtctgcagctgtactcctcggag
cccactgagccctacctgtcctcacagaactatggtgaactcttctctaaccagatcatc
tggtttgtagatgacaccaatgtgtaccgagtcactatccacaagacctttgaaggtaac
ttgaccacaaagcccatcaatggagctattttcatcttcaaccccaggactggccagctc
ttcctcaagatcattcacacatctgtgtgggctggacagaaacgtcttggacagctggcc
aaatggaagacagctgaagaagtggctgccctgattcgctctctccctgtggaggagcag
ccgaaacagatcattgtaaccaggaagggcatgctggaccctctggaggtccacttgctt
gacttccccaacattgtgatcaaaggttctgagttgcagctgcccttccaggcctgtctg
aaggtggagaagtttggagacctaatcctgaaggctacagaaccacagatggtgctgttc
aacctctacgatgactggctcaagaccatctcgtcttacacagccttctcccgactcatc
ttgatcttaagagcactccacgtcaacaacgaccgtgccaaggtgatcctgaaacctgac
aagaccactatcacggagccccatcacatctggcccacgctcactgacgaggagtggatc
aaggtggaagtgcaactcaaagatctcattctggcagattacggcaaaaagaacaatgtg
aatgtggcctcactgacgcagtctgagatccgtgacatcatcttgggtatggagatatcc
gctccatcgcagcagcgccaacaaattgccgagattgagaagcagactaaagagcagtca
cagctcacagccacgcagacccgaactgtcaacaagcatggtgacgagatcatcacctcc
accacctccaactacgagacccagaccttctcctctaagaccgaatggagagtcagggcc
atatctgctgccaacctccatctccgaaccaaccacatctacgtgtcatcggatgacatc
aaggagacaggctacacctacatcctgcccaagaatgtcctcaagaagttcatttgcatc
tcagatctgcgagcacagattgcaggttacctgtatggcacgagtccacctgacaacccc
caggtgaaggagatccgttgtatcgtcatggtgccacagtgggggacacaccagactgtc
cacctgcccaaccagctgcctggacatgaataccttaaggaaatggagcccctcggctgg
atccacacccagcctaatgagtcgccccagctgtccccacaggacgtgaccacccatgcc
aaggtcatggctgacaacccctcttgggatggagaaaagaccatcatcatcacttgcagc
ttcaccccaggctcgtgcacgctcaccgcctacaagctgacacccagtggctatgagtgg
ggtcggcagaacacagacaagggcaacaaccctaaaggctacctgccgtcccactatgaa
agagtgcagatgctgctctctgaccgcttcctgggcttcttcatggtgcccggacaagtg
tcctggaactacaacttcatgggtgtgcgccacgaccccaacatgaagtatgacctgcag
ctggccaaccccaaggagttctaccatgaagtccaccggccctcgcacttcctaaacttt
gcctcgctgcaggagggtgagatctataatgcagaccgtgaggacatgtatgcctga
DBGET
integrated database retrieval system
