KEGG   Micropterus salmoides (largemouth bass): 119882575
Entry
119882575         CDS       T07309                                 
Name
(RefSeq) coatomer subunit beta'-like isoform X1
  KO
K17302  coatomer subunit beta'
Organism
msam  Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:msam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msam04131]
    119882575
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msam04147]
    119882575
Membrane trafficking [BR:msam04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    119882575
Exosome [BR:msam04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   119882575
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_SCAP Beta-prop_LRRK2 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N PH_SPO71
Other DBs
NCBI-GeneID: 119882575
NCBI-ProteinID: XP_038548589
LinkDB
Position
Unknown
AA seq 1205 aa
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMVVSLYSGTVVVWNHESQMMVKTFELCDLPV
RVARFVARKHWVIAGADDMLIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDRKWSCSQVFEGHSHYVMEIVINPKDNNQFASASLDRTIKVWQLGSKSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVTCVRFHPG
LPIILTGSEDGTVRVWHSNTYRLENTLNYGLERVWCICGQPGSNSVAFGYDEGSIIIKLG
REEPAMSMDSSGKVMWARHSEVQQANLKAMGETEMMDGERLRLGVKDMGSCEIYPQTIQH
SPNGRFVVVCGDGEYIIYTAMALRNKSFGSALEFVWAHDSSEYAIREGSSMVKIFKNFKE
KKAFKPEFGAEGIFGGFLLGVRSNSGMAFYDWESAELIRRIEIQPKHIFWSDSGDLVCIA
TDESFFVLRYLPEKVAGAQESKEEMTEDGIEDAFEVLGEVPEVVKTGVWVGDCFIYTSSL
NRLNYYVGGEIITIAHLDRTMYLLGYIPKDNRLYLGDKELNVISYSVLLSVLEYQTAVMR
RDFSTADKVLPTIPKEQRIRVAHFLEKQGFKQQALAVSVDPEHKFDLALQLGEVKIAYQL
ALEAESVQKWKQLAELATTKCQFSLAQECLHQAQDYGGLLLLATSSGNTDMVGKLAEGAE
RDGKTNVAFLTYFMQGRLDKCLDLLIKTDRLPEAAFLARTYLPSHVSRVVKLWKESLSKV
NQKAADALADPSQYSNLFPGLQEALLAEQYLKETHVRVRPAAEYPLITPNEDRNVLEESA
GFEANEEITEPEEVVKSLNKTAMVAAVTLAEAAVVEEPIPVKQIIDPVSITEEESTPTAA
SPLRVAVTEEYVEPKQAESVSSEEDTITKSEEPSVSDFLESTTEITPKEPELQFSPLEDV
GSSAETEVWDNSPATDGVPAACVSETSLTISETVATNTITTEDVLVSTGLIVDTDLIEAI
ATGEMPVYKELETSIISSEAPAIIDTAAEENDVAAPLPVAVEELISFENTASPLFSAPVQ
VKTFPDLALDPLLDPLEDTMPLLKPVAAQEPEQEDQTTAIPVKPEDNLEPAVALQAELVV
LAPVAALAVGNIAEEEAGPEEAVEPAEDLEAEMNDEVLDDLDLDNFDMEDIDTTDINLDE
DFLSE
NT seq 3618 nt   +upstreamnt  +downstreamnt
atgcctctgcggctggacatcaagcggaagctgacggctcggtcagaccgggtgaagagt
gtggacctgcaccccactgaaccgtggatggtggtcagcctctacagcggcactgtggtg
gtctggaaccacgagtcacagatgatggtgaaaacctttgagctgtgtgacctgcctgtc
agagtggccaggtttgtagccaggaaacactgggtcattgctggagcagacgatatgctg
atccgtgtgttcaattacaacactctggagcgagttcacatgtttgaggctcactctgac
tacatccgctgtatcgctgtccaccctacacagccctacatcctcaccagcagtgatgac
atgttgatcaagctgtgggactgggacagaaagtggtcgtgtagtcaggtgtttgaggga
cactctcactacgtcatggagattgtcatcaaccccaaagacaacaaccagtttgccagc
gcctctcttgacagaactattaaagtgtggcagctgggctccaagagtcccaacttcact
ctggagggtcatgagaaaggcgtgaactgtattgattactatagtgggggagacaagccc
tacctcatatcaggggctgacgaccgcctggtcaagatctgggattatcagaacaaaact
tgtgttcagacccttgagggtcacgcccagaatgtgacctgcgtccgtttccatcctggg
ctgccaatcatcctcacaggctcagaggatggcactgttcgagtgtggcactccaacacc
taccgactagaaaacacacttaactatggcctggagagggtgtggtgtatatgtggccag
cctggctccaacagtgtggcctttggctatgatgaaggcagcatcatcatcaagctgggt
cgggaggagccggccatgtccatggactccagcggaaaggtcatgtgggctcgccactcc
gaggtgcagcaggccaacctgaaggccatgggagagactgagatgatggatggagagagg
ctgcggctgggtgtcaaagacatgggcagctgtgagatctacccccaaaccatccaacac
agccccaacgggagatttgtagttgtgtgtggagatggggagtatatcatctacaccgcc
atggccctgaggaacaagagctttggctcagctctagagtttgtctgggcacatgactcc
tcagagtatgccatacgggaaggcagcagcatggtcaaaatatttaagaactttaaagag
aagaaggcttttaaacctgagtttggggctgaaggtatctttggtggcttcttactggga
gtgaggtcaaacagtggcatggccttctacgactgggagagtgctgaactgatccgccgt
atcgagatccagccgaaacatatcttctggtctgactctggggaccttgtgtgtatcgct
acagatgagtctttctttgttctgcgctacttaccagagaaagtggcaggagcccaggag
tccaaggaagagatgacagaagatggaatagaggatgcctttgaggtgctgggtgaggtc
ccagaggtggtgaagacaggagtttgggtgggagactgcttcatctacaccagctctctt
aacagactaaactactatgtaggaggagagatcatcaccattgctcacttggacaggacc
atgtatctgctgggctacatccccaaggacaatcgtctctaccttggagacaaggagctg
aacgtcatcagctattctgtgctgctatcagtgcttgaataccagacagctgtcatgagg
agggacttcagcacggccgacaaggttctacccacaatacccaaggagcagaggatcagg
gtagcccattttttggagaaacagggcttcaaacagcaggctctggctgtgtctgttgac
ccagaacacaagtttgacctggctcttcagctgggagaggtcaagatagcctaccaactg
gccttggaggcagagtcagtgcagaaatggaagcagctggcagagctcgctactacaaag
tgccagtttagcctggctcaggagtgtctgcaccaagctcaggattatgggggattattg
ctcttggccacctcctcgggcaacaccgacatggtgggcaaattggccgagggggcagag
agggatgggaagacaaacgtggcctttctcacctatttcatgcagggaagattggacaag
tgtctggaccttctcatcaaaacagatcggttgccagaggctgcatttctggcaagaaca
tatctgcccagccatgtgtcaagggtggtaaagctgtggaaggagagtttgtccaaagtc
aaccagaaggcagcagatgctctggctgaccccagccagtacagcaacctgttccctggc
ctccaggaagccctgctggctgagcagtacctgaaggagactcatgtcagggtcaggccg
gctgcagaatacccactcatcacgccaaatgaggaccgtaatgttctggaggaatctgca
ggttttgaggctaatgaagagatcactgagccagaggaagtggtgaagagcctgaataaa
actgccatggtagcagcagtgacacttgcagaagcagcagtagtggaggaacccattcca
gtaaaacagatcatagatcctgtttcaataacagaagaagaatccaccccaacagcagca
tccccgctgcgtgtcgcagtgacagaagagtatgttgaaccaaaacaagcagaatctgtg
tcttctgaggaggacaccatcactaaatccgaggagccttcagtctcagactttttggag
tccaccacagagatcacccccaaagagccagagctacaattcagtcccttggaagatgtc
ggatcatcagctgagaccgaagtctgggacaattctccagcaactgacggtgtacctgct
gcctgtgtttctgaaacctctctaaccatcagtgagacagtggcaacaaacacgataaca
acagaggatgtcctagttagcactggtctgatagttgatactgatttaatagaagctata
gcaactggggaaatgcctgtttataaagaactggaaacaagtattatctcctcagaagca
cctgccatcatagatacagcagcagaggagaatgatgttgcagcaccattacctgttgca
gtggaggagctcatctcctttgaaaacacggccagtccactgttcagtgcgcctgtccaa
gtcaagacttttccagatctggcccttgatccactgctagacccactggaagatacaatg
ccattactgaagccagtcgcagcacaagaaccagaacaagaggaccaaaccacagcaatc
ccagtaaagcctgaggacaacctggagccagctgtggctctacaggctgagctagtagtt
ttagccccggttgcagctctcgcagtggggaacatagcggaggaggaggcaggtcctgag
gaagctgtggaaccagcagaggaccttgaggcagagatgaatgacgaggtcctagatgat
ctggatctggacaattttgacatggaagatatcgacaccacagatatcaacctggatgag
gatttcttgagtgaatga

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