Micropterus salmoides (largemouth bass): 119882578
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Entry
119882578 CDS
T07309
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msam03021
]
119882578
Transcription machinery [BR:
msam03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
119882578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
119882578
NCBI-ProteinID:
XP_038548593
LinkDB
All DBs
Position
Unknown
AA seq
2120 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWRRFVCQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHHTPGRRELWLFWWGDDPSFAELIHNELSSEEDGEWESGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYQKEEKTINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPLQRLGEEHLSLAQQGSSPLQVILSPYGLNGTLTGQAFKMSDHPTQKLIEEWRQFY
PISPNPKEVQEDKMEDTDWEDDSLAAVEVLVAGVRMVYPSCLVLLPLSDLPAVVPQGSAN
NSGSLCGAQQGQAAHRDPAMSSVTLTPPTSPEEAQTDYQPAHRWLKLSSASDGYSSNNTL
HGGKIPRRLASQMVESVWQEYNINRTGHKRKFTTLTNGTCEEESGKSELWDFVEPAHRLH
CNCSRHKNQKQRSSSTSGHPPSSGQPAQPAPKHKLGEKLEKGEKQQKRPQTPFHHRNSVS
EEQSLEPQNQRLCLRSQEEGSYPSLHHVDTVSKAPTLHTHGPPADLVGSPPPPPLSPHPC
DHGEGDMTPGGMKSSSTPIHQTFYPPSVEPCLLPQKGSSEEPQLENMPMPLRFPPAYSET
LEPTIFVGSAINPNEDSTHNPWKYFNLPRKKATNFLTPHLPVDKIRDDSGGGGGTETVVS
VTELMSGSTQPLKVSQELVKTYAQRRNSHLTSATGDGEHSEEADPYAFVEGDEEFSFAEK
KDKPGAEREGSKKHKADEGTGTGDDGQGPSGNKPSASTSLIHENDLAVSYSDLDKIFNSD
EDELAPGSRRAGVGADDRFGCKDTKAATLDPLSCISSADLHQMFPTPPSLEQQGYSPMNS
GSKDSLEAGAGLTLLDGSQLNSHFKMEVEEGFCSPKPSEIKDFSFVYKPETCQLLIGCSK
YAPLKTLPSQCLLPVKLPEDCVYTPSWTMGKMELIPPVTNVNLLTKDSNVPSVEPDYSQT
YTPQTHTPFMSSSAPPSNSGTGILPSPATPRFSVPTPRTPRTPRTPRGPSSVQGSLKYDN
SDLYSPASTTSTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVCVC
NMNIRGADVGVYLKDNGEAQYPCTCGFSAVTNRRFGQSAGLFLEDELDVVGRGSDSSRDT
ERCFEELRASTAHKAGSLTEKPPDELILLLQDQCTNPFAPMAGVEYPKLSSAPSSFLRVE
ERDCYNDCYMALEHGRQFMDNMSGGKVDETLVKSTCLHQWPKCKSADMNKLFSQDVLRVL
LSLQPVLQDTIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEY
DFVVLSPFGLPYWEKLLLDPFGSQRDMGYVVICPENEALLGRAKTFFKDLSTMYEACQLG
QHRPICKSHPEGVLKVGTTEGMTEQPLSDWFLKMAARDGNNEAFNKLKLFAQVCRYDLAP
YLSEQSLDSSLLSQRSPVVASSTSSSQTSSSSSTSSGPQFTNTTSSSTSSAQPAQVNSTP
PPSSSGSQTIGGMASAKPGSYSPFGTAGLQGSTSQNGLQSNLQGAGGLAENGPSANQPQG
PTEPPESTMERDKVGKPTDGESHAVSYPPAIVVYIVDPFSYEDADREVHSSAYTLGLLRC
YMEMLQFLPASIRNAVSVQIVPCQYLLQPVHSGERHLYGQHLKSLAFSVFTQCRRPLPNS
TNFKALTGFGPGLAIDMALKNPERPECLRLYTPPFILAPVKDKQTELGETFGEASQKYNV
LFVGYCLSHDQRWLLASCTDQHGELLETCIISIDVPNRARRKKASARRVGLQKLWEWCLG
LVQVTSLPWRVVIGRLGRMGHGELRDWSILLSRRNLQSLSKRLKETCRLCGISAADTPSI
LSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAMV
QVNTNTSEPIDINFNPINPDGSDGMVIFDLFDNDMVDPDLINILPNSPTTSPVHSPGSHY
HQGGDGSKGQSADRMESHEEALNILQQPMALGYFVSTAKAGPLPDWFWSACPQAQNQCPL
FLKASLHLHVSSVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCDPATQDRRS
CLPVHFVVLTQMYNFIMNML
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgctttgtaccaaacggggccagtttggaggattgccactccaacctcttc
tgcctggctgatttgactggaataaaatggaggcgttttgtgtgccaaggacccacctct
tcacccatccttttccctgtgactgaggaggaccccatcttgtgtagtttcagccgatgc
ctggctgcagatgtgctgagtgtgtggagaagacaccacaccccgggtcgcagagaactc
tggcttttctggtggggggatgaccccagttttgccgagcttattcataatgagctctca
agtgaggaagacggtgagtgggagagtggcctgtcctatgagtgtcgaacgcttctgttc
aaggccatccacaacctgctggagcgctgtctcatgaaccgtggctttgttcgcattggc
aagtggtttgttaagccataccagaaggaggagaagaccattaataaaagcgagcacctg
tcttgcgctttcaccttcttcgtacacggcgacagcaacgtgtgcacgagtgtggagatc
gctcaacaccagcctcttcagcgactgggcgaagagcatctcagccttgcccagcagggc
tccagccccttgcaagtcatcctgagcccgtatggcttgaatgggaccctcaccggacag
gcttttaagatgtcagaccaccctactcagaagctcatagaagagtggaggcagttttat
cccatcagccccaatcccaaggaggtccaggaagacaagatggaggacacagactgggag
gacgactccctggcagctgtggaggtccttgttgcgggagtaaggatggtttacccttcc
tgccttgtgctcctccccctgtcggacctccctgctgtggtccctcagggctcagccaac
aactcaggaagcctttgtggtgctcagcagggccaggctgctcacagagatcctgccatg
tcctctgtcactctgactcctccaacgtcaccagaggaggctcagactgactatcagcct
gcccacaggtggctgaagttgtcctctgcgtccgatggctatagctctaacaacactctt
catgggggtaaaattccccggaggctggccagccagatggtggagtctgtgtggcaggag
tataacattaatcgtacagggcacaaaaggaagtttacaactttgaccaacgggacctgt
gaggaggaatcaggcaaatctgaactttgggattttgtggagcccgctcacagactgcat
tgtaattgctcacgacataagaatcaaaaacagcgatccagcagcacctcaggacacccg
ccttcatcaggccagcctgcccagccggcccctaagcacaagctgggcgagaagctggaa
aagggggagaagcagcagaagaggccgcagacgccttttcaccaccgcaactctgtgagc
gaagagcaatccctggagccacagaaccagaggctttgtttaagatcacaggaggagggc
tcgtatcccagcctgcaccacgtggacacggtatccaaagcccctacgctgcatacccat
ggcccccccgcggatctcgtcggatccccgcctccccctcctctcagcccacatccctgc
gatcacggagaaggtgacatgactccaggtggcatgaagagttcgtccacgcccattcac
caaacgttctacccgccgtcagtagagccttgtctgttgccacagaagggctcatctgag
gagcctcagttggagaacatgcctatgccgctgcgcttccccccagcctatagcgaaacc
ttggaacccaccatttttgtgggttcagccatcaaccccaatgaagactccacccacaac
ccttggaagtatttcaacttacccaggaagaaggccaccaacttcctgacacctcaccta
cccgtggataaaatacgagatgattctgggggaggtggaggaaccgaaactgtagtgtct
gtgactgagttgatgtcgggctccacgcagcccctaaaggtgtcgcaggagctggtcaag
acttacgcccagcggagaaacagccatcttacctccgccactggagacggagaacacagt
gaggaggcagacccatacgccttcgtagagggagatgaggagttcagtttcgctgagaag
aaggacaagcctggagcggagagagagggcagcaagaaacacaaggcggacgaaggaact
ggaacaggagatgatggtcagggtccatcaggtaataaaccttcagcctcgaccagcctc
atccatgagaacgacttggccgtgtcctacagcgatctggataaaatcttcaattcagat
gaagatgagctagcgcctggatccagaagagctggagttggtgcagatgacaggtttggc
tgtaaagacactaaagcagccacattagacccactgtcttgcataagctcagcagacctg
caccagatgttccccaccccaccctccctggaacaacagggttactctcccatgaactcc
ggcagcaaggatagcctggaagcaggggcgggcctcaccctgttggacggcagccagctc
aacagccactttaagatggaagtggaggagggattctgcagcccaaagccatctgaaata
aaggacttctcctttgtgtacaagccggagacatgtcagttgttaatcggctgttccaag
tacgcccccctgaagacgcttcccagccagtgtcttttgcctgtcaaactgccagaagac
tgtgtgtacacgcccagctggaccatgggcaaaatggaactgatacccccagtgacaaat
gtcaatctcctcaccaaagacagtaacgtccccagtgtggagccagactatagccagacc
tacacccctcagacccacacacccttcatgagcagcagtgcccctcccagtaacagcggc
acaggcatcctgccctccccagcaactccacgtttctccgtgcccacgcctcgcacacca
cgcactccacgcactccccgtggcccatcgagcgtccaaggctcactaaagtatgacaac
tctgacctttactcgcccgcttccactacctccacctgccgaccactcagctctgttgag
ccagccaccgtaccctccatccccgaggctcacagtctctacgtcaccctcattctctcg
gagtcggtcatgaacctcttcaaggactgcaactttgacagttgctgcgtgtgcgtctgc
aacatgaacatccgaggcgcagatgtgggcgtgtaccttaaggacaacggcgaggcccag
tacccatgcacttgtggcttcagcgctgtcaccaaccgacgctttggccagtcagccggg
ctttttctggaggacgaactggacgtggttggacggggctcagactctagtcgggacaca
gagcggtgttttgaagagctgcgagcatcgacggcgcacaaagctggcagcctgacggag
aaacctccagatgagctaatccttctgctgcaggaccagtgcaccaacccttttgctccg
atggcaggtgtggagtacccgaagctgagctcagcccccagttcatttctgagggtggaa
gaaagagactgttataatgactgctacatggcactggagcatggcaggcagttcatggac
aatatgtcaggaggcaaagtagatgaaacactagtgaaaagcacctgtcttcatcaatgg
ccaaaatgcaaatcagcagacatgaacaagctattctcacaggacgtcctgcgggtgttg
ttgtccctccagccggtgctgcaggacaccattcagaagaagaggagcgtgcgctcctgg
ggcgttcaggggccgctgacctggcagcagttccacaagatggctgggaggggatcatat
ggaacagatgagtctcctgagcctctgcccatccctacctttttggttggttatgagtat
gattttgtggtgctgtctccttttgggttgccctactgggaaaagcttcttctggatcct
tttggttcccagagagatatgggatatgttgtcatctgcccagaaaatgaagctctgctg
ggcagagcaaaaaccttcttcaaagatctgagcactatgtatgaggcatgccagcttggg
caacacaggcccatctgtaagagtcacccagagggcgtattgaaggtcggcaccacagaa
ggcatgacagagcagccccttagtgactggttccttaagatggctgccagagatggaaac
aatgaagcctttaataagctcaaactctttgctcaagtgtgccgctatgatctagctcca
tacctgtcagagcagtctttggatagctctctattgtcccagcgcagccccgttgtggcc
tcctccacctcctcctcccagacctctagctcttccagcacctcctcaggaccccagttc
accaacactaccagctccagcaccagctctgcccagcctgcccaggtcaacagcacccct
cctccgtcctcctcaggatcccagactatcgggggaatggcctcggccaaaccaggctcc
tactcgccatttgggacagcaggcttgcagggcagcacttctcagaatggactccagtca
aacttgcagggtgcaggggggctggcagaaaacggaccctctgccaaccagcctcaaggg
cccactgaaccaccagagagcacaatggagagagacaaagtggggaagccaacagatgga
gagtcccatgctgtgtcttacccgcctgccatcgtggtgtacatcgtcgaccccttcagc
tacgaagacgcagacagagaggtccactccagcgcctacactctgggcctactgcgctgc
tacatggagatgctccagttcctgcctgcttccatcagaaacgctgtctcagtgcagatt
gttccctgccagtatctgctgcagccggtgcacagtggggaacgtcacctctacggccag
cacctcaagtcgctggccttctctgtgttcactcagtgtcgtcggcctctgcccaactcc
accaacttcaaggctctgacgggttttggccctggtctcgccattgacatggcactcaag
aacccagagaggccagagtgtctgcgtctgtatacgccgcccttcattttggctccagtg
aaagacaaacagactgagctcggggagacgtttggtgaggcatcccagaagtacaatgtc
ctgtttgtcggctactgcctgtcccacgaccagcgctggctgctggcctcctgcaccgat
caacacggggaactgctggagacctgcatcattagtattgatgtgcccaacagggctcgc
aggaaaaaggcctcagccaggcgagtgggtttgcagaagctgtgggagtggtgtctcggc
ctggtgcaggtgacctcactgccatggagggtggtcattgggcggcttggtagaatgggc
cacggcgagctgagagactggagtattctgctgagcaggaggaacttgcagtctctcagt
aaacgactgaaggagacatgtaggttgtgtggcatctctgctgctgacactcccagcatc
cttagcgcctgtctggttgccatggagccccagggttcctttgtcatcatgccagattct
gtttcaacaggttcagtgtttggtcgcagcaccacactcaacatgcaaacgtcgcagctg
agcacacctcaggacacgtcttgcacgcacatcctggtgtttcccacctctgccatggtg
caagtcaacactaacacttcagagcccattgacatcaacttcaatcccataaatcctgat
ggatctgatggaatggtcatctttgacctgtttgacaacgacatggtggatccagacctc
atcaatatcctgcccaactcccccacaacatctcctgttcactctcctggctcccactac
caccaagggggagatggaagcaagggccagagtgcagaccgtatggagtcccatgaggag
gctctgaacatcctacagcagccgatggctctgggctactttgtctccacagccaaggct
ggaccactgcctgactggttctggtcagcctgccctcaagcccagaaccagtgcccactc
ttcctcaaggcctctctgcacctgcatgtgtcttctgtccaatcggacgagcttctgcac
agtaagcactcccaccccctggactctaaccacacctctgatgtgctcagatttgttcta
gagcaatacaacgccctctcctggctgacgtgcgaccctgcaacccaggaccgacgctcc
tgtctgcctgttcactttgtggtgctcacccagatgtacaactttatcatgaacatgctc
tga
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