Micropterus salmoides (largemouth bass): 119882734
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Entry
119882734 CDS
T07309
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119882734 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msam01009
]
119882734 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119882734 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
msam03029
]
119882734 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
msam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119882734 (si:ch211-11n16.2)
Membrane trafficking [BR:
msam04131
]
Autophagy
Other autophagy associated proteins
Others
119882734 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
msam03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
119882734 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
GBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119882734
NCBI-ProteinID:
XP_038548885
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MSEILMKEMESISISPVKAEERPDGVSSFLLVDEQENLQVRDESEFVERLGCGDVAGVKV
ISIFGNTGDGKSHTLNHILFGGESVFYTSKSPSSCTVGVWAAYDPTLSLVALDTEGLLGA
AANQNQRMRLLLKVLAVSDIVVYRTRAERLHNDMFVFLSNASGAYLKHFTPELKALSSRC
GLDVPLSSLGPAVIVFQETTHTQLLGHDSKVGGHADTLLQKRFHDLGLGTEAFNSVQYVG
TQTITPPTDYNRLLEAVRQQVKNTHTRSPRQPGIVFHALEALSERFCGELSDDKMTLYCF
FPDEYFTCSAVCLSCNIRCKNGMNHLKDRVPHMADGLCQYSHQYNNKVLICKRCYEGGRE
VIVVPKTSASNDNPWFGLAKYAWSGYVLECASCGVIYRSRQYWMGNQDPESGVVRSEVKH
VWEGSDTFLATHQNAAQRVLDGMNFVIQSVSEYSTGPTKAVAAWLTDQVAPPYWRPNTEI
TACHGCQKVFEEAERKHHCRSCGEGFCHPCSSHRMPVPERGWGSGPVRVCKACYRQGGPA
DTNSQVCKVEPRGLIARRVTEVAQSTLDMVTTAVDYPLCFVKEVARPDYWVPDQDITQCH
QCSKIFTSAMSKHHCRACGQGVCGPCSTHIRPVPSRGWDHPVRVCDGCHARTDSL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaatactgatgaaagaaatggagagtatatcgatcagtccagtgaaggcagag
gagcgtccagacggtgtctcgagcttcctgctggtggacgaacaagaaaacctgcaggtc
cgcgatgagtctgagtttgtggagcgactcggatgtggggacgtggcaggagtcaaggtc
atctccatctttggcaatacgggcgatggcaagtcccacaccctcaaccacatcctattc
ggcggtgagagcgtgttctacacctccaagtccccaagctcctgtacggtgggagtgtgg
gccgcgtatgaccccaccctcagcctggttgccctggatactgagggcctgttgggggct
gcagccaatcagaatcagagaatgcggttactgctaaaggtattggcagtgtctgatatc
gtagtctatcgtacacgggcagagcgcctccacaacgacatgtttgtgtttctgagcaac
gcctcgggggcctacctgaagcacttcaccccggagctcaaggccctctccagccgctgt
ggtctggacgtgcccctctcttctcttgggcctgcagttattgtcttccaggagacaacg
cacactcaattgctcggtcatgattctaaggtgggcggccatgccgacacgctgctccag
aagcgctttcatgacctgggcttggggacagaggccttcaactcggtgcagtatgtggga
acccagaccatcacgcctcccactgactacaacaggctgctagaggccgtgaggcagcaa
gtgaagaacactcacacacgctccccccgccagcccgggatagtgtttcatgctttggaa
gccctaagtgagcgtttctgtggagaactgtcagacgacaagatgaccctgtactgcttc
ttcccagacgagtactttacctgctccgctgtctgtctcagctgcaacattcgctgtaaa
aatggaatgaaccatctgaaagacagggtcccccacatggccgatgggctgtgccagtac
tcacaccagtacaacaacaaagtccttatctgtaagaggtgctatgaaggaggcagagag
gtgattgtcgtgcccaagacgtcagcgtccaatgacaacccatggtttggactggccaag
tatgcctggtcaggctatgtgttggagtgtgctagctgtggtgtaatctaccgcagcaga
cagtactggatgggaaaccaagaccctgagagcggcgtggtgcgatctgaggtcaaacat
gtctgggaggggtcggacacctttctggccacccaccagaacgcggcccagagggtcctg
gatggtatgaactttgtgatccagtccgtgtcagagtacagcaccggccccaccaaagct
gtcgctgcctggctcactgaccaggtggcgccaccatactggagacccaacacagagatc
actgcctgtcatggctgtcagaaggtgttcgaggaggcagagaggaagcaccactgccgg
tcatgtggcgagggtttctgccatccctgctccagccacaggatgccggtgccagaacga
ggttggggcagtgggcccgtccgggtgtgtaaggcctgctaccgacagggagggccagct
gacactaacagccaggtgtgcaaggtggagcctcgtggtctgatagctcgcagggtgacg
gaggtggcccagtccacactggacatggtcaccacagctgtggactaccctctctgtttt
gtgaaagaagtggctcggccagactactgggtgccagaccaggacatcacccagtgccac
cagtgttccaaaatcttcacttcggccatgtccaagcaccactgcagggcctgtggacag
ggtgtgtgcggtccctgctccacacacatccggcctgtgccctcccgaggctgggaccac
ccagtcagagtgtgcgacggctgccacgcccgaaccgacagtctgtga
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