Micropterus salmoides (largemouth bass): 119882736
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Entry
119882736 CDS
T07309
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04270
Vascular smooth muscle contraction
msam04625
C-type lectin receptor signaling pathway
msam04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119882736 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119882736 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
119882736 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119882736 (arhgef12a)
Membrane trafficking [BR:
msam04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119882736 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
DUF3091
Annexin
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
119882736
NCBI-ProteinID:
XP_038548886
LinkDB
All DBs
Position
Unknown
AA seq
1445 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDKKTKSDKTSFPSNEFDPTEALLVQKSGSSS
VLTEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLSEAESEMLGVSISSPNSPAI
ERPYSPQHCLSNTQSPWDDNSSMCNQKVDLLQKMLSREQQDLQAMKEEYSRNPSPKLLKD
IQEATKHIPQLQGQLFRATGATQEAVPGGDADDGGMFETEHTPTSKGDNSTDLSWSSTPI
SRVFGPGSPDSLWPRESSYPSPKSTPRNSLNSCHSPEAEDATDLDTLSPTSVSSPSSSRL
VSQIIGAEDDYFDSDQEQTNGQSNSFNSIEQLKSRPAHLAAFLHHVISQFDPAPVLCYLY
ADLYKHTNSKETRRVFMDLHNFFIDRGANLKVAVPDSISADLDRRRTELIPEEINRQHVQ
TLQDSLLPDIQKNLEDFRQKRSMGLTVAEVELARLDQERVRDRVTLERERSYAENIVTKI
EDILLTTQTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKTEK
EGEEKVKKPRFPSILGPQRRPSRIEAASVGKALDGRPRPQKQLSQPTLGSSDHMEAGRLR
GSQSSEGSELIHSTSVSTSSPNSGTFNSDTSRDTDMGGTPTSGPSRLSDGLQSDPLDGLL
YPSSHFDSLDQLQEDDRESDRAHEGTPKAIRRLEGLGAADVQSEDDQGTDSEHDPPNWQQ
LVGREVLAGLRPQEIKRQEVINELFYTERAHVRMLKVLDHVFYQKLSKEAILPTADIKNI
FTNLEEIVQLHVSILEQMVAVRKRNESSVIDQIGDDLLSWFSSGEEEKIKQAVGTFCSNQ
PFALEIIKTKQKKDSRFTSFIQEAESNRLCRRLQLKDIIPVEMQRLTKYPLLLENIAKYT
DNTVEKDKVKQAADCCRKILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILELK
NLDLTKRTMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLAGTAD
TKHIFSPIIKLNTVLVRSVATDNKSFFVLSMSDNGAQIYELMAPTVSDQRTWQGLITQRA
EAMKVKPHSVIPLPQTDGERDGVEIITAGVSRLSRDSDRTSTGSTQSTDKESCPASRSVI
QSSLPGNNPFEGVKAEEEEEEGDEEEECFVDPELPYQVADDGKEGDSFNMFPSRADEALK
TLAALKQVLVTQLMSQEAAEQNKRSTGARLLRTTSLRTPVDNRARVMVHNGSQKNSSQTE
DPTQDLGSGDTGFFDSPEDYAGYLVLEGYGGPGESSTDDDILASSTGKQLRTSQGCAADS
GINLRFSTASQAGSLSSFSRQVLSHLRNLQANLNYLKEVEAKYNNLICQRPERSAEDTDG
NKDKR
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaaacagaaccagc
agcattctcagtaaagaccaccccccagacaagaaaaccaaaagtgacaaaacctccttt
ccctccaatgagtttgaccctacagaagctctgttggtgcagaagagtggcagcagcagt
gtgctaacagaggggaagcctgagtcctgtggtctggtccagcgatgtgtaataatccag
aaagatgaaaatggctttgggctcactgtcagtggtgacaacccagtgtttgtgcagctt
gtcaaagaagatggggctgctatgcgggcaggtgttcagacaggagacaggatcatcaag
gttaacgggacccttgttacacattctaatcacattgaggtggtgaagcttatcaaatcg
gggtcctatgtggccctcacagtgttggggcgtcccccagggctcgcccagatccctttg
tctgaagcagagtctgaaatgttgggcgttagcatttcctccccaaactccccagcaata
gaacgcccctacagtcctcagcactgcctctccaacactcaatcaccatgggatgacaat
agcagcatgtgcaaccagaaggttgacctcttgcaaaagatgctctcaagagagcagcag
gatctgcaggctatgaaggaggagtacagcaggaacccctcccccaaactactgaaagac
atccaggaagctacgaaacacattcctcagctgcagggtcagctctttagggccactggg
gcaacacaggaggctgttccaggtggtgatgcagatgatggtggcatgtttgaaacagag
cacactcccacctcaaagggagacaacagtacagacctgtcctggagcagcactcctata
tctcgtgtatttgggcctggatctcctgacagcctgtggccaagagagtcatcctaccca
agcccaaagagcacacccaggaacagcctaaactcctgccactctccagaggcagaggat
gccactgacctggacactctgtcccctaccagtgtcagcagtccatcctcctcccgcctc
gtctcgcaaatcattggagctgaggacgattattttgattcagaccaggagcagacaaat
ggccagtctaacagttttaacagtattgagcagctcaagtctcgcccagcccacctcgca
gccttccttcaccatgtcatctctcagttcgaccctgctcctgtgctgtgctacctctat
gctgacctctacaagcatacaaactccaaagagaccagacgggtgttcatggacctccac
aactttttcattgaccggggagcaaatttaaaggttgctgttcctgattccatctctgct
gatctcgaccggcggcggacagaactaatcccagaggaaataaacagacaacatgttcaa
acactgcaagactctctgctccccgacatccagaagaaccttgaggatttcaggcagaag
cgcagcatgggcctaacagtggctgaagtagagttggccagactggaccaagagagagtc
agagaccgtgtcactctggagcgagagcgctcgtatgctgaaaacattgtcaccaaaata
gaggatatcttgttaactactcagaccacagaggaagagaaatgcactacaatgcagtat
gtcatttatacatacatgaagcaccttggtgtgagggtcaaggaacctcgcagcctggag
tccaaacgggtcaggatcaactttcttcccaagatcaagaaaagcatcaagacagaaaag
gaaggggaagagaaggtgaagaaacccagatttcccagtatccttggacctcagcgtcgg
cccagccgcattgaagcagcatcagtgggtaaggccttggatggtcgcccccggcctcag
aaacagttgtctcagcccacactggggtcaagtgatcacatggaagctggccgcctaaga
ggcagccagtccagcgagggctctgaactcatacactccacgtctgtcagcacctcatcc
ccaaacagcggcacctttaactcagacaccagccgagacactgatatgggtggaactccg
acttcgggcccctccaggttaagtgacggccttcagtccgaccctttggacgggctgctg
tatccttcttcgcactttgacagcctggaccaactccaagaggatgacagagaaagcgac
agagcccatgagggaacaccaaaggccataagaaggcttgagggactgggtgcggctgat
gtccagagtgaggacgaccagggaacagactctgagcatgaccccccaaactggcaacag
ctggtggggcgagaggtcctagcgggtctcaggcctcaggaaatcaagagacaggaagtc
attaatgagctgttttacacagagcgcgcacatgtgcggatgctgaaagtgttggaccac
gttttctaccagaagctctccaaagaggccatcctgcctactgctgacatcaagaacatc
ttcaccaacttggaggagattgtacagctgcatgtttcaatactggagcaaatggtggcc
gttcggaagagaaatgagtcttcggtaattgatcagataggagacgacttgctctcctgg
ttcagcagtggagaggaggagaagattaagcaggcggtggggacgttctgcagtaaccag
ccttttgctctggagatcatcaagaccaagcagaagaaggactcgcggtttacttcgttc
atccaggaggcagagagtaatagactgtgtcgccgtctgcagcttaaggacatcataccc
gtagagatgcagcggctcaccaagtaccccctgctactagagaatatcgccaagtacaca
gacaacacagtggagaaggacaaagtcaagcaggcagcggactgctgtagaaagatcctc
aatcacgtcaaccaggctgtgaaggaatctgaggacaagcagaggttggaggactatcag
agaagattggacctctcttctctaaagcagacagacaaccccatgatcctggagctaaag
aacttggatctaactaagagaacgatggtgcatgaggggccgctgtcatggaaagtgaac
aaggacaagactattgagttgtacacactcctcctggaggacatcctggttctgctgcag
aaacaggatgagcgtctgatcctgaagtgtcacagtaaaaacctggcaggcaccgcagat
accaaacatatcttcagccccatcatcaaactcaacactgttctagtgcgctctgtggcc
acggacaacaagtccttcttcgtcctatccatgtcagacaacggagcccagatctatgag
ctgatggcgcccacagtgtcagatcaaagaacgtggcagggtctaatcacccagagagcc
gaggccatgaaagtcaaacctcacagcgtcataccattacctcagactgatggggagaga
gacggtgtggagatcattacagcaggtgtttccaggctaagtagagactccgaccgcaca
tccaccggcagcacccagtccacagacaaagagagctgtccagcctctagaagtgtaata
cagagttctctaccaggtaacaatccgtttgagggagtaaaggcagaggaggaggaggaa
gagggggatgaggaggaggaatgttttgtggacccagagcttccttaccaagtggcagac
gatggcaaagaaggagactcgtttaacatgttcccttccagagcagacgaagcactgaaa
acattggcagcattaaagcaggtattggtgacccagctgatgtcccaggaggctgccgaa
caaaacaaacgctccacaggggcgcgtctcctcaggaccacctctctgcggacccccgta
gacaaccgcgcacgggtgatggtgcacaatggctcacagaagaacagctcccagacagag
gacccgactcaggacctgggctctggggacacgggcttctttgattctcctgaagattat
gcaggatatttagtcctggagggttacggtggtccaggggagagcagcactgacgatgac
atcttggcatcaagcacagggaagcagctgcgcacctcacaaggctgcgccgccgactcc
ggcatcaacttgaggttttctacagcgtcacaagctggcagcctctcctcttttagcaga
caggtcttgtctcaccttagaaaccttcaagccaacctcaactatctgaaggaggttgag
gccaagtacaataatctaatatgccaaaggccagagaggtcagcagaagacacggatgga
aacaaagataagagatag
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integrated database retrieval system
