Micropterus salmoides (largemouth bass): 119882832
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Entry
119882832 CDS
T07309
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04517
IgSF CAM signaling
msam04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119882832
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119882832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msam04812
]
119882832
Cytoskeleton proteins [BR:
msam04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119882832
Intermediate filaments
Intermediate filament-binding proteins
119882832
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Helical_needle
PH_4
TMP_3
Motif
Other DBs
NCBI-GeneID:
119882832
NCBI-ProteinID:
XP_038549046
LinkDB
All DBs
Position
Unknown
AA seq
2708 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPIGSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLKDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYSEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQQLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIEAE
KIINRYEALASDLLDWIEKTIAVISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQCFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELASEMEAEGYYDIRRISARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEDTQVQLLSKDFGKHLLEVDDLLQKHSLQEADIAVQAERVETLNTAALKFTTIEGYQ
PCDPQVICNRVNHVSSCLEELKQLAAKRRAELEESRQLWAFFQELEESEAWIREKSSILG
AQGYGKDLSSVLKLLQKHKTLAGELLAHRSLLQNTMKRGKQILSEKSFGTAGIQERIMEV
KGEWKRLEDQAAQRLGHLQEALHFFQFSTETDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVSEAIDKHRVHVVALRKHMVALPMRYREQEEVQMRMGEVEQLYTEVVEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNSIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYMGSDLGGVLSLQRRLSTMEGALSVLEPKLLHLQEDAEHL
ATSHPGRAMEILVPFDGISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TSAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSERIRERIDTLANRGNQNRE
LAQQWLEKLNDQWGLQRFLQDCHELGDWVCEKMLMARDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIQEKPELSPVVRKKLEQIRECWQDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLEGQLVYVDQAQDLTTVNKQLKKLQTMETQMEEWYKEVGQLQVQ
VASIPQQTQIKETVAGRQAVVEARMVRLIEPLKERRRILLAAKEVHQVGRDLEDEILWIQ
ERLPMAMSQEHGSSLQAVQQLMKKNQTLQRELQGHRSRIEDVLERAGIIASIRSPEADCA
RAGHDQLAQLWALLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDCEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDFEHVTVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCREVLAQIEDKHRRLPEVRARQGSTANTTTLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQYWKELLTSCEECRVQITTETDKLRFFGMVR
DQIMWMDSIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARSRSTLECIEMGKTLLAAR
NPAAEEIKEKLDKVVAKQHELSEKWDKHWDFLQQLLEVHQFAQEAVVAEAWLTAQEPFIN
SKELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKLPPTPLLGRK
VFLDPQDALPSPSILPRLPISPVTRQTIYEQNEASSPPSPSPATPTPSPSSVACRLGSTV
ANYTPVMNGSSYRHTLEARRTGVVGVAAGLGQPAPASIASVATAAMLVSANQARESASAA
KDQATKAMSHLQPPQAARTLEVKSSPYLRQPKIKHLDDAVTPLLVASRLEKARERGREMM
MGEIGTERAEVAVMAEVVLQEPGRERLHSEPTRGPRGSRTDPLGQAEPQVQTHTLHRDHR
IERQLSSEQLIQARRDELPQEVWREHAERRDKRTLERQTSSEQEGHGSHGGHGGHEGRRR
ERDRHRAERQESSEHDTGKEHSDRRSGGGEKRSTMAEIVEQLQEREAAQARGEVPRLPNG
VPEKSSRPDRPRARDRPKPRRRPRPKEPGETTRRSRSAPAQSSPAVPQPPTHTAHHEGFL
FRKLDIESLKKSTNRSWVNLYCVLNKGEMGFYKDAKNTTTPYNNEPLLNLSHCHCDVTNG
YKKKKNVFTLKTKDGSEFLFHAKDEDDLKAWVTNITASISEHEEIAKWGQPQPTTSSTDE
GTRRDGSKADNRSERGGERSDRAERIERAEKEREKEREKERERGERSERSDRAGKSETKR
SEKSSKKK
NT seq
8127 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctccccagacctggacaacgcggaagcccagcgccagctcaacaacaac
aatcgaccaatcggctcggggttctgggagacggagtgtaccagctccaagctgtttgag
tgttctcgcatcaaggccctggcagatgaacgagatgcggtgcagaagaagacttttacc
aagtgggtaaactcccatctggccagagtgtcctgtcgcatatctgacctctacaacgac
ctgaaggatggatacatgctcactagacttctggaggtcctcagtggagagttgctgccg
aggcctacacggggtcgtatgcggatccactgcctggagaacgttgacaaagctctccag
tttcttaaagaacagagggttcaccttgaaaatgttggttcccatgacattgtggatgga
aaccaccgcctcaccctgggccttatctggaccatcatcctacgctttcagatccaggtg
attaaaatagagacagaggacaaccgagaaactcgctctgccaaggatgccctgctgctc
tggtgccagatgaagactgcagggtactctgaggtcaacatccagaatttcaccacctgc
tggagagacggcctcgccttcaatgccctcatacacagacacagacctgacctgatagag
ttccacaagttgacacggtccaatgcaacccataacctccagcaagccttcaacatcgct
gagcagcagctgggcctcaccaaactcctggaccctgaagatgtgaacacagagaaccca
gacgaaaagtccatcatcacctatgtggtctcctactaccactacttttccaagatgaag
gctcttattgtggagggcaagagggttggcaaggtgctagacaattgtattgaggcagag
aagatcatcaaccgctatgaggctctggcgtccgacctgttggactggatagaaaagacc
attgcggtcatcagcaaccagaagtttgccaactcgctaaccggagttcagcagcagctg
caggccttcacaacctactgcaccatagagaaacccatcaagtttcaggagaaggggaat
cttgaggtccttctcttcaccatccaaagcaaactcagagccaacaaccagaaaccctat
gtgcctcatgatgggaagctcatctcagacatcaacaaggcctgggagaggctggagaag
gcggaacatgagaggggcgtggctctgcgaaaggagctgattcgtcaggagaagctggag
ctgctggctcagtgctttgaccacaaaaccaccatgagacaagcttggctcaatgagaac
cagagacttgtatctcaggacaattttggttatgacctaccagcagttgaggcagcaatg
aagaaacacgaggccattgaggcggacatagcctcgtatgaagagcgaattggcgtggtg
gtggaacttgcctcagagatggaagccgaaggatactacgacatccggcgtatctcggca
cgcaaggagaacatcctgggccagtggagtctgctgaaggagttggtggctgggaggagg
acccggctggagaagaacctggccctgcagaagacttttcaggacatggtctacatgatc
gactggatggaggatacacaggttcagctgctgtcgaaggattttgggaagcatcttctg
gaggtggatgacctgctgcagaaacacagtctgcaggaagccgacattgcagtgcaggct
gagagggtcgagacactcaacaccgctgctctcaaattcaccactatagagggttaccaa
ccgtgtgacccacaggtgatttgtaatcgtgtcaaccatgtctcttcctgtctggaggag
ctgaaacaactggcagctaaaagacgtgcagagcttgaggagtcgagacaactgtgggcc
ttctttcaggagctggaggagtcggaggcctggatcagggagaagagctccatcctggga
gctcagggttatgggaaggacctgagcagtgtgctgaaattactacaaaaacacaagact
ctggctggagaactgctggctcaccggtcactgctgcagaacaccatgaagcgaggaaag
cagatcctgagtgagaaaagctttggcacggcagggatccaggagcgcatcatggaggtg
aagggcgagtggaagaggctggaggaccaggccgcgcagcgtcttggtcacctacaggag
gcgctacacttttttcagttctccacagagacggacgacttggtagcgtggctgcaggac
gcttaccgcctggtctccagtgaagactttggacatgatgagtactccacccagtccctg
ctgaagaaacacagaggggtcagcgaggccatagacaaacatcgcgtgcatgtagtggca
ctgcgcaaacacatggtggcgctgcctatgcggtaccgtgaacaggaggaggtacagatg
cgtatgggagaggtggagcagctgtatacggaagtggtcgaggtggcggtactcagacag
cagtggcttcacgacgccctcgccgtctaccgtatgttcagcgaggtcaatgcctgtgag
ctgtggattgatgagaaagagcagtggctggacaagatggagatcccagaaagactggag
gacgtggaggtggtggcacacagatttgagagcctggatcaggagatgaacagcctgatg
ggaaggatcctggatgttaaccagatagttcagcagctcctggatggtggtcatccatct
tctacagaggtcagaggttgtcaggaccacctcaactccaggtggaacagcattgtggag
ctggttgagcagaagaaagatcagctggactcgatgttacgcctgcagaactacctgctg
gagtgtgccgagatcaagtcccagatccaggacaagagaaaagccatcgacgccactcag
tacatgggcagtgaccttggaggagtcctgtctctgcagagacgcctgtccacaatggaa
ggagccctgtctgtcctggagcccaaactactgcatctacaggaagacgcagagcatctc
gccaccagccacccaggtcgggccatggagattctcgtaccgttcgatggcatcagtgtg
gagtgggaggagctgaaacgcactttgcagggctgtgaggattcgctgatggtggctagc
aggctgcagagcttcatacaggacctggactcgttcctcacctggttggtccagacgcag
acgtccgccgcttcagaccagctgcccaacgacctggaagaggcagagaaactgattaac
aaacacgctgccctaaaggaggagattggacggtatgaagaggactacgagcgcctccag
gccatgaacgagctgctggagtccgaggaggctcctctccctcaggccgccctgcagcag
tggctccagaagctcgatgtcggctggaacaagctgctggagatgtgggagagcaggaga
gaggttctagtccaggctcacattttccatctgttcctgcgagatgtcaaacaggcagag
tctttcctcaacaaccaggagtctgcccttgctcacgtggagctacccaccacagtggaa
acagtcgaagctgccataaagaaacacaaggactttaccaccaccatggagctgaacctg
cacaggatcaaagctgtgatcgaggccggagagagcctgatcagccagagtaacatctac
tctgaacgcatcagggaacgcattgacacgctcgccaacaggggaaaccagaaccgtgag
ctggcccagcagtggctggaaaaactgaacgaccagtggggacttcagaggtttcttcag
gactgtcatgagctgggcgactgggtgtgtgagaagatgctaatggcgagggacagcagt
cgagacgagacccagaagcttcataagaaatggctgaagcaccaggcctttatggccgag
ttggcccagaataaggaatggctggataaaattgaaaaggagggccagcagctgatccag
gagaagccagagctcagcccggtggttcggaagaagttggagcagatcagggagtgctgg
caggatctggagagcaccacccaggctaaagcccgccagctctttgaggccaacaaggct
gacctgctggtgcagagctacgaaagcctggaccagagactgggccagctggagggtcaa
ctggtttatgtggaccaggcacaggacctcaccactgtcaacaagcagctgaaaaaacta
cagactatggagacccagatggaggagtggtataaggaggtggggcagctccaggtgcag
gtggcctccatcccgcagcagacgcagatcaaagagacggttgctgggcgtcaagccgtc
gtggaggccaggatggtgcgtctgattgagccgctgaaggagagacgacgcatcctgctg
gcggccaaggaagttcaccaagtcggacgagacctggaggatgagattttgtggatccag
gagcgcctcccgatggccatgtctcaggagcacggctccagtctgcaggcagtccagcag
ctcatgaagaagaaccagacacttcagagggagctacaaggccacaggagcaggatcgag
gacgtgctggagagggcgggaatcatcgcttccatacgtagcccagaggccgactgtgcc
agggcgggacatgaccagctggcccagctgtgggctctgctctgggccgagaccgagagg
aggcagctggtcctggacgccatgtaccaggcccagcagtactactttgacacggcagag
gtggaagcctggctgagcgagcaagagctgcacatgatgaatgaggagaaggggaaggac
gagccgagcacactgcagctgctgaagaaacacttggtcctggaacagaccatcgaggac
tacgcagagaccatcggcctgctgtcacagcagtgtcgacagctgctggagatggggcat
ccagactgcgagcagatcagtaagcgtcagtcgcagatcgaccgtctgtacgtgtctctg
aaggacctcgtggaggagagaaaaagccgtctggagcagcagtactggctctaccagtta
aacagggaggtggacgagctggagcagtggattgctcagagggaggtggtcgccagctcg
cccgaactgggtcaagactttgagcatgtcactgtcctgcaggagaagtttacagagttt
gcatcagagacgggcagtgtgggtcaggaaagagtgacggcggtcaaccagatggtggac
gagctcattgactatggtcactcagaggccgccaccatcgctgaatggaaggatggggtg
aatgaggcctgggccgacctgctggagctcatggagacccgggcgcagatgctcgccgcc
tcacaccagcttcacaagtttttctctgactgcagagaggttttggcccagattgaggac
aaacatcgaaggctgccggaggttcgggctcggcagggaagcactgccaacaccactacc
ctgcagagactcctgcacagctttgaacaggacatacagctgctggtcacacaagtgcgt
cagctgcaggagagtgcggcccagctgaggacggtgtacgccggcgaaaaggccgaagcc
attgcatgccgcgagcacgaagtgatgcagtactggaaagagctgctgacgtcctgcgag
gagtgtcgagtacagattaccactgagacagacaagctgaggttctttggcatggtccga
gatcagatcatgtggatggactcgatcatctgtcagatagggacaggagagaagcccaga
gatgtgtcctcagtagaggtgctgatgaattatcaccaaagtctgaagagtgaagtggag
gctcgcagccggagcaccctggagtgtatcgagatgggcaaaaccctgctggctgctaga
aacccagcagctgaagagatcaaggagaagctggacaaggtggttgctaagcaacatgag
ctttctgagaagtgggacaagcactgggatttcctacagcaattgttggaggttcaccag
tttgcccaggaggcggtagtggcggaagcttggctgaccgctcaggagccgttcatcaac
agtaaggagctgggtggcagtgtagacgaggtggagcagctgattcgtcgacatgaagcc
ttccgcaaagccgctgccacctgggaagagcgattcagttcactgcgacgactcaccacg
gtagaaaagttgaaagcagagcaaagcaaactacccccgactcctctgctgggtcgtaaa
gtcttcctggacccccaagatgccttacccagtccgtccatcctcccccgcctccctatc
tcccccgtcacaagacagaccatctatgaacagaacgaagccagctctcctccctcaccc
tcacccgccacgcctacaccctctccttcatctgtggcttgtcggctggggtcgacagtt
gctaactacacccctgtgatgaacggctccagctaccggcacaccctggaggcacggcgc
actggggtagtgggtgtggccgctggactggggcagcccgcacctgcctcgattgcctca
gttgccacggctgccatgttagtctcagccaaccaggcgcgggagagcgccagcgccgcg
aaagaccaagcaacaaaggcaatgagtcacctccagccaccgcaggcagctaggaccctg
gaggtgaaatcctccccgtatctacggcaacccaaaatcaaacacttggatgatgcagtg
actccgctgctcgtggccagccggctggagaaagcgagggagagggggagggagatgatg
atgggagagatagggacagagagagcggaggtggctgtgatggccgaggtggtgctccag
gagccgggccgggagcgtctgcacagtgagcccaccagagggcctcgggggtccaggact
gacccgttgggtcaggctgagcctcaggtccagacccacactttgcacagggaccacagg
atagaacggcagctgtccagcgagcagctgatccaggcacgcagggacgagctgcctcag
gaggtgtggagagaacatgccgagaggcgggacaaacggacgctggagagacaaacgtcc
agcgagcaggagggccatgggagccacgggggccacgggggccacgagggccggcggaga
gagagggaccgacaccgagcagaaagacaagaatccagtgagcatgacaccggaaaggag
cactcagacagacgctcaggaggaggagaaaagaggtccaccatggcagaaattgtagag
cagctgcaagaaagagaagcagcacaggcccgtggtgaggtgccccgcctgcctaatggg
gtaccagaaaagtcttcccgtcccgaccggcctcgagctcgagacagacccaaaccacgg
cgccgaccacgacccaaagagccaggagagacgacgcggcggtccaggtctgctccggcc
cagagcagcccggcagtcccccagccgccaacacataccgcacaccatgagggcttcctt
ttccgcaagctggacatcgagagcctgaagaagagcaccaataggtcatgggtcaacctg
tactgcgtgctgaacaaaggggagatgggtttctacaaggacgccaagaacaccaccacg
ccctacaacaacgagccgctgctcaacctctcccactgccactgcgacgtcaccaacggc
tacaagaagaagaagaacgtcttcacgctcaaaacgaaggacggcagcgagtttttgttt
catgcaaaagatgaggacgacctcaaagcttgggtgaccaacatcaccgccagtatttca
gagcacgaggagattgccaaatggggtcagccccaaccaactacctcatccaccgacgag
ggcacacggcgtgatggcagtaaggcggacaacaggtcggagcgaggtggcgagcgctcg
gaccgggccgagcggattgagcgggcagaaaaagaaagggagaaagagagagagaaggag
agggagagaggggaacggtcggagaggtcagatcgggccggaaagtcggaaacgaagcgc
tcagaaaagtcgagtaagaaaaagtga
DBGET
integrated database retrieval system
