Micropterus salmoides (largemouth bass): 119882874
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Entry
119882874 CDS
T07309
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119882874 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119882874 (trip12)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119882874 (trip12)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
HECT type E3
119882874 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
119882874
NCBI-ProteinID:
XP_038549117
LinkDB
All DBs
Position
Unknown
AA seq
2058 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVTGRLQSEQVKHKANSPPESRRPNSKASKAT
ASSATGQSRGHSSRRSGLTLSVASFVLQDEPEAAGTSEQERPVHQSKSEGTRGLKRSEAP
DQISTFGPTPAKKPKSLPPPRDNTSETKKGAAKSKKRSLASEPPASSGRGQSKKSGAAGA
SPIQKRKKSDSLPGLSSTAGSLPNRTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSAST
SSSSSTTGTNSTTTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFEWA
ARFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFD
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLSESESFLVTSPPKACP
SGTASLCTTTISTASTTSANNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANSEPSRTAG
VSGLARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVLQRLCTATEQ
LNLQVDGGMECLVEISSIVSESDVSSFEIQHSGLVKQLLVYLTSSNDRDLLSRDVRLKRF
LNVFAGCPVPGLEPVGRLDPTENGPYLALVHKINSCLSQIEQFPVKVHDFPSGNGNGSRG
SQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREED
EDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEER
ESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQTAPTKTSPRNAKKQ
DELWHDGVCPSVINPLETYLTSEPPETITFDDPSLEVNLLLRVLHSISRYWFYLYENAVC
KEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTRQMLFYVT
AFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRA
MLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEGTKYMFSTR
GLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHEMSIS
SHDLVNIDPGVAKSIHHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSVEDLGLDF
TLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLHHL
QYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLF
LQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIETM
REKLLIAAREGQQSFHLS
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccatacagtcacgggaaggttgcagtcagagcaggtaaaa
cataaagcaaattccccacctgaaagtagaagacctaattctaaggcttccaaagccaca
gccagctcagccactggccagtccagagggcacagctcaagaagaagcggtcttactctc
tccgtggcttcattcgtgttgcaagacgagccagaagctgcagggacatcagaacaagag
cgaccagtccaccagtcaaagagtgaaggcaccagagggctgaagagaagtgaagctcct
gaccaaattagtaccttcggaccgacccctgccaagaaacccaaatcgctcccaccaccc
agagacaatacctcagagaccaagaaaggcgcagccaagtccaagaagagatcacttgct
tcagaaccacctgcatcgtcaggtcgaggtcagagcaagaagagcggggccgctggggcc
tcaccaatccagaaacggaagaaatcggactctctccccggtctaagtagcaccgctggg
tccctccccaatcgtaccgagggcagaactgcaaaacccaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacggactcctcctcctctgcatccacc
tcttcctcttcctccaccacaggcacaaatagcaccaccactcagggtgcccgagtcaaa
cagggaaaagatcagaccaaggcacgacgctctcgctcagcctcaagcccctccccacgc
cgtagtacccgcgataaggagcaggccaaaaccgccagctcttcaaaatttgagtgggca
gcacgcttcaaccccaaagtcaacctgccaaaacctaaactgtccttacccggatcctcc
aaaactgagacctctaaacctgggccatcaggattacaagctaaactagcaagtttgaga
aaatccactaagaagcgcagcgagtctcctccagcagagctccccagctttcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggc
aagcgcggggcagccgacgcacgccgacaggagaaaatggcagactctgacaacaaccag
gatggggccaactcttcagctgctcgcactgatgaggcatctcaaggggcctcagcttca
agctcagttgctggagcagtgggcatgaccacctctggagagagtgaatctgatgactct
gaaatggggaggcttcaagccctactggaggccaggggtctccccccacatctttttggg
ccccttggaccccgaatgtcgcagctgtttcataggaccattggcagtggagccagctcc
aaggctcagcagctactacagggcctgcaggccacaggtgacgagtctcagcagctccaa
gctgctattgagatgtgccagttgttggtgatgggcaatgaggaaacacttggtggcttc
cctgtcaagagtgtggtgcccgctttgatcactctgttacaaatggagcataactttgat
attatgaatcatgcctctcgggcactcacatacatgatggaagcactccctcgatcctct
gctgtggtggtcgatgctattcctgtcttcctggagaagcttcaggtgatccagtttatt
gatgttgcggagcaggccctcactgctttggagatgttgtcaaggcgacacagcaaagcc
attttgcaggctggtgggctcgctgactgcctcctctacctagagttcttcagcatcaat
gctcagaggaatgccttggccattgcagccaactgctgccagagcattactccagatgag
tttcactttgttgctgattctctgccgctattgactcagagactcacacaccaggataaa
aaatctgtcgaaagcacttgtctctgtttcgccaggctggtggacaactttcagcatgaa
gagaacctgctgcaggaggtggcatcacgggacctgttgaccaacattcagcagctgctg
gtagtgacccctcctgtgctcagctcgggaatgtttataatggtggtgcgcatgttttcc
ctcatgtgctccaactgcccctgcctggcagtccagcttatgaaacagaacatagcagaa
acactgcgtttcctcttgtgtggtgcgtcaaatggcagctgccaggagcagattgaactg
gtaccccggagcccccaggagctctatgaactgacctccctcatatgtgagctgatgccc
tgcttgcctagagagggcatctttgcagttgatgtaatgctgaagaaaggcagtgcccag
acaacagagggagcgatctggcagtggagggatgacaggggactgtggcatccttacaac
cgcatcgacagccgcatcattgagacagcccaccagaacggggaggatgagattagtttg
tcaaccctgggtcgtgtgtacacaattgacttcaactctatgcagcagatcaatgaagac
acaggaacagcacgcggtatccagaggaaaccaaatcctcttgccaaccccaatacaggg
agccaccaggaggttcgtcgagaagacgctcgagcccagttgatgaaggaggaccctgag
ctggcaaagtgctttatcaaaactctgtttggggtcttgtatgaggtgtacagctcatcg
gctggccctgctgtcagacacaagtgccttagagccatcctcaggatcatctactttgct
gatgcagagctgctaaaggatgtgctgaggaaccatgctgtgtccagtcacattgcctcc
atgctgtccagccaggatctgaagattgtagtgggttctctgcagatggctgagatcctc
atgcagaagctgcctgatgtcttcagtgtctatttcagaagagaaggtgtgatgcaccag
gtgaagaacctgtcagagtctgagagctttctagtcactagtcccccgaaggcttgtcct
agtggtactgccagtttgtgcactaccaccatcagtactgcatccaccacatctgcaaat
aatgcaactcctgatctgggttcacccagcttccagcacagcatggatgactcactggac
ctcagccctcaggggcggttaagtgatgtcctaaagaggaaacggctacctaaaagaggg
cccagaaggcccaaatactctccccctagagatgatgataaagtagacaatcaggccaag
agccctaccagtactcagtcacccaaatcatccttcttggccagtcttaatcccaagacc
tggggcaagctgggtgcccagaccaacaatgccaactcagagccctcacgcacagcgggg
gtgagtggcctggcacgggcacctcccaaggactcaatttcaaataacagagacaaaata
aaggcctggatcaaagaacaggcaagtaagtttgtggagcgctacttcaactctgaaaat
gtagacggcagcaaccctgcactgaatgtactccagagactctgcacagccactgagcag
ctcaacctgcaggtggacggtggtatggagtgcctggtggagatctccagcattgtatca
gaatctgatgtgtcgtcttttgagatccagcacagtgggctggtgaagcagctcctggtc
tacctgacttccagtaacgacagagacttgctcagccgcgatgtgcggctcaagaggttc
ctcaatgtgtttgctggctgtccggttccaggactggagcctgtaggtcgtctggaccca
acagagaacgggccttatcttgcactggtgcacaaaataaacagctgcctgagccaaatt
gaacagttccctgtcaaagtgcatgatttccccagtggtaacggcaatggcagcaggggc
tctcaggcactgaagttcttcaacacacatcagctcaagtgtcagctgcagagacaccca
gattgcactaatgttaaacagtggaaaggcggccctgtgaagatagaccccctggccctg
gtgcaagccatcgagagatatctcgttgtcagaggttatggtcgtatcagagaagaggat
gaagacagtgatgacgacggttcagatgatgaaatcgatgaatcactggcggcgcagttc
ctgaattctggcagtgtgcgtcacagactacagttctacattggtgaccacctgctacca
tacaacatgacagtataccaggctgtacggcagtatagtcttcaggcagaagaagaaagg
gagtcgacggacgatgaggctaacccacttgggcgagctggtatctggaccaaaacgcac
acaatatggtataagcctgtcagagaggacgaggatggcagcaaagacgctgtgggtgga
aagaggggccgagcccagactgcccccaccaagacctcacctcgcaacgccaagaagcag
gatgagctgtggcatgatggtgtgtgtcccagtgtcatcaatcccttagagacatacctc
acttcggagccaccagagaccataacctttgatgacccctctttagaggtcaacctgctg
ctgagggtcctgcactccatcagtagatactggttctacttatatgaaaatgctgtgtgt
aaggaaattatccctaccagtgagttcatcaacagtaagctgacagccaaagctaatcgt
cagctacaagacccgctcgtcatcatgacgggcaacatccctacttggctcattgagctt
ggaaagacctgccctttcttcttccccttcgacacccggcagatgctattctatgtaact
gcctttgatcgcgacagagccatgcaacgcctactggacacaaacccagagatcaaccag
tcagattctcaggacagcagagttgcacctcgtcttgacaggaagaagaggacaataaac
cgtgatgagctgctaaaacaggctgagtctgtgatgcaggaccttggcagctccagggca
atgttggagattcagtatgagaatgaggtgggcacgggtctcgggcccactctggagttc
tacgctttggtgtctcaggagcttcagcgggctgatcttggcctgtggaggggcgaagag
gtcacattggccaatcctaaaggaagccaagagggaactaagtacatgttcagcaccaga
ggactatttgctgttccctttggcaggacaaccaaaccagcgcacatagccaaaatcaaa
atgaagttccgtttcttaggaaagctgatggccaaagccataatggacttcagactgctg
gacctgccgctagggctgccattttataagtggatgctgcgacacgagatgtctataagc
tcccatgacctggtgaacattgatcccggtgtggcaaagtccatccatcacttggaggat
attatccgccagaagaagaggctggagcaggaccgatcacagacgagagagaccctacag
caggcactggagagcctgaacatgaacggctgctcagtggaggacctgggtttggacttc
acccttccaggattcccgaacattgagctgaaaaagggcggcaaagatgtcccagtcaca
atctacaacctggaggagtacctcaggttggtggtgtactggactctaaatgaaggagtg
tccagacagtttgagtcatttagggaagggtttgagtccgtcttccccttgcatcacctg
cagtatttctatccagaggagcttgaccagttgctgtgtggcagtaagtcagagacgtgg
gacgtcaagacactgatggagtgctgtcgaccggaccacggctacacacacgacagtcgc
gccgtacgtttcctgtttgaggtgttgagcagcttcgatgccgagcagcagagactcttc
ctgcagtttgtcacagggagccccagactgcctgtcggaggtttccgcagcctgaatccg
cctctgacgattgtgaggaagacattcgagtcgacagagaacccggatgacttcctcccc
tcagtcatgacctgtgtcaactacctgaagctgcctgactactccagcatagagaccatg
cgagagaaactgttgattgcggctcgcgagggccagcagtctttccacctttcctga
DBGET
integrated database retrieval system
