Micropterus salmoides (largemouth bass): 119882956
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Entry
119882956 CDS
T07309
Symbol
capns1b
Name
(RefSeq) calpain small subunit 1b isoform X1
KO
K08583
calpain, small subunit 1
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msam01002
]
119882956 (capns1b)
Peptidases and inhibitors [BR:
msam01002
]
Cysteine peptidases
Family C2: calpain family
119882956 (capns1b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_6
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
119882956
NCBI-ProteinID:
XP_038549307
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MSLQIQQISLSFILKNVKLYLTHVVAVAPCGRWRAVNTTSASPASRRTGSADRKLIYKQD
GNMFLAKTFIKGIVNVVGDIDHTQFMPSAPAPPRIPLHLAKAQETDEEAQFRRVFKQLAG
DDMEVSPTELMDILNKIITKHGKLKTDGFSIESCKSMVAVMDSDSTGKLGFHEFKHLWTN
IKTWQGIYVAYDEDKSGVIGAQELPKAFKAAGFPLNEDLFKLIIRRYSDENGNMDFDNFV
GCLVRLDAMCRAFKTLDKDNSGSIDLDIKEWLQLTMYS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttacaaatacaacaaatatctctgtcattcattctgaagaatgtgaagttgtac
ttgacgcatgttgttgctgttgctccctgtggccgctggagggcagtgaacaccacgtca
gcttcaccagcatcaaggcggacaggctctgcagacaggaagctgatttacaaacaagac
ggcaacatgtttctggcaaagactttcatcaaaggcatcgtaaatgtcgtgggcgacatc
gaccacacgcagtttatgccttcagcccctgctccccctcgcataccgctgcacctcgcc
aaggctcaagagaccgatgaggaggcgcagttcaggagagttttcaaacagctggctgga
gatgacatggaggtcagccccactgagctgatggacatcctcaacaaaatcatcaccaaa
catggaaagctgaagactgacggtttcagcatcgagtcctgtaagagcatggtcgctgtc
atggacagcgacagcaccgggaaactgggcttccacgagttcaagcacctctggaccaac
atcaagacgtggcagggcatctatgtcgcctatgatgaagataagtcaggtgtgatcggc
gctcaagagctgccgaaagccttcaaggctgcaggtttccctctgaatgaggacctcttc
aagctgattatccgtcgctatagtgatgaaaacggcaacatggactttgacaatttcgtt
ggctgcctggtgcgactggacgccatgtgcagagcctttaagaccctggataaggacaac
agcggctccatcgacctggacatcaaggagtggcttcagctgaccatgtactcttga
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