Micropterus salmoides (largemouth bass): 119883039
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Entry
119883039 CDS
T07309
Symbol
brca2
Name
(RefSeq) LOW QUALITY PROTEIN: breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03440
Homologous recombination
msam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119883039 (brca2)
03460 Fanconi anemia pathway
119883039 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119883039 (brca2)
03036 Chromosome and associated proteins [BR:
msam03036
]
119883039 (brca2)
03400 DNA repair and recombination proteins [BR:
msam03400
]
119883039 (brca2)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
119883039 (brca2)
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
119883039 (brca2)
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
119883039 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
119883039 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
RF-1
Motif
Other DBs
NCBI-GeneID:
119883039
NCBI-ProteinID:
XP_038549432
LinkDB
All DBs
Position
Unknown
AA seq
2990 aa
AA seq
DB search
MDLPSKNMYDTFKHEIWRDLGPLDPDWFEALTAQTVTNEGSVSDQDELCANQEGNFKTPF
DKTTVEXQLFSTPKVFRHCRVVSPETEDEHSFTAEHEKQTMPWTVTQSPCLFPGVPGAKY
GGIQPYSQDSFDLLHTPQKSPVSHAKLISESLGAQIHPDMSWTSSLNTPSAVPSTLILSK
TDESPCPVSVSADKNVVFVRKLFPSLSNASEVVSPKNNDMPTLHQGVVSPEAGQNPEPHD
SPQSSLNQSDSVWRQKLPDTTEEGEIRSTIAGVLDGAENVLSIFFTSSSSALRKVKTDRI
KRKQIIPTIEHGCSSTEISTANNDASSEQRTADQEHGRFPSSPPVKTGEYGITQWSPLSL
SDIPPSTVDTCHDNSLTRQVDNNIIPGQLWNDTSFGQLRPPVKISDSGFTKRKFVYTVDS
LKLQVQGKETQSQKMDSSPRIPDSGQEVYMKQLGKAPDEADCCSIRKNEMEKQGNLAEEN
LPPSVQAKVQDLDMSQLCRDFAQDFSQMSDTGKLSKVAEDTPRNGFCPSACLSAMKREKQ
KARQANLHHDCDGVSNRRNVSATNNSINEGTTSDSGFHSADITPMTASSFVLSSENNRQQ
WTGFKTDIHKTTPFQSTNKRNGKPHSDDILQEAKTDAKLSTAIKKSQTLGPGKENELHIE
CTSAQLSSSAKGTVNNINCIPLNGQADGSLPEKTVSLPYVHASGFKTASNKRIPISSANL
ERAKCLLEETEGERTSSDQHIKCAPDSKAKISSHGSVKNTSNSNQPPTSSEKCVDISCQL
TASQKADVTELCTLMEEADSQFEFTQFKTAKLKQHCQDNTTSPKKVDKELDPDFLTGIDF
DDSFSSDAEKHLVVTDKMTLDSDGKTNCETANIKSTGFSVSSAMKQENPSAEDVSSSSNH
ISECSHSMMSAGPKNCDRAGPIETSKVENNNPLMLGAGFKTAGGNVLRVSKKCLSKAKAL
FADLEEDLVTSKKLPDKQSSESDAKTQQRHSVDNHAGNLLHHKEDKWKFRGYDNNTRGMI
QGCFSNKKESVCSVRPVTGIRDEDTTKCLKNVKMDTTTCQSGFQMANGKGISISTKAMQE
SDAFFKDCDVIDSNAGMSGKHKSMEPLPGSVSHKKNLVKFKNVQGMKVNFSEEPVNEPDV
EVHNLAFKNAPTLMTAASFHGNPSSTAKAFSSPSCTTSKNTGSSINELSNSGGFCTASGK
KVSISADALKQAEGVLNEIHTLEETNKQVKKKGDSLKTGHLTNQIWVSPHKNSGFQTASG
KGVTISSAALKKAKTLLSECEGADEDKIGVGPTHSKLPIHGPPPRDSGFLAASGRPLAFS
SEALQKAKALFSDISFSTESSPVSDTRNNDKTQDNAENTERMHCGFSTAGGGKVHVSQKN
LLKAKHILKEVDDADASFRDCYIMDGNNGMSVKRKESIAPVSGTGSEKKIFSKFKPHQKV
TNILEEPRSGHTEFENVNIGTVLTHEKMLPLNVEINKDVFKNTPDSTETVSLHGDPSLMA
KPLYSPLCTSKNIGASAISELNSGGGFCTASGKKVSVSDDAMTKAKSLLNESATFEDTNK
QLKQKDDTLPPQNGGFQTASGKGVAISSAALKTAKTLLRECEGADEDKNGVGPTHSKLPV
HVPPPKNGGFLAASGRPLAFSSEALQKAKALFSDISFSAEIPPVSDTVHSDVRNNPEKIH
CGFSTAGGTKVHVSQKNLLKAKNLLNVFADGECHDSSSYSNPHDTDKSDLSKEKRSSDYN
LTSSSDKDMPTNESATQIVKSLTSLQETDHTNAFKFKELKITPLMVGKPHDSPGEELTGV
LDYEINWTSSSDVSKVKRTERSSVLNFQSLNLRGCSETQERFLAQEALDCTMALLEDESL
ASQIPSMTSENLPLQDYPISGNRSVEEQKGRGKRLLEESNMTGQPPLKRRLLEEFDRTVD
GPRGSTVHPEKSSPNGVMKDRRVFKYSVPLHPNITRPHWSGKNYVEATLQKTAPKQHLTP
GDCRSAHSKKPAFVPPLFKNAKAESCKNTVLKDSIRTPSAFVPPFKKQRTIIQESSSKPQ
EEEGKQHHLLVTPINSNTYVPPTKKTQNTTAVTGHKSKDIQSVALTDTANDNLMHLQKVP
VGCGSDSSATESSHVDNTLSRSQDMFQNLHNIGLARDMQDMRIRKKKRQTIRPIPGSLFL
TKTSGVSRISLKAALNGRPPSRYTPKQLYRHGVHQHVCEITSGTAESLRFNLQQFIKQEA
FLDGGGVQLADGGWLIPSNDGTAGKEEFYRALCDTPGVDPKLISEEWVYNHYRWIVWKQA
SMERSFPETMGSLCLTPEQVLLQLKYRYDTEVDHSCRPALRKIMEKDDTAAKTLVLCVCG
VVSRGHSPKRQRFSDTKTPEGVDAKVENPSAVVWLTDGWYAIKALLDEPLTAMLHKGRLA
VGGKLIIHGAQLVGSQDACSPLEAPDSLMLKICANSSRPARWDAKLGFHRDPRPYLLPVS
CLYSNGGPVGCVDIIILRSYPIQWMERKLDGGVVFRSVRAEEKEARRYNSHKQKAMEILC
AKIQAEFEKEEKSNNKPQRRRQTVSHQDIASLQDGEELYEAVGDDPAYLEVHLSEQQLET
LHNYRRSLMEKKQAELQDRYQRAVENAENGEGGCPKRDVTPVWRLCFADSMDQPGSVYQL
NLWRPSLDLQSLLKEGCRYKVYNLTTSDGKKHGGSSTVQLTGTNKTQFQDIQASPEWLLT
RFQPRVSSSFVDLQNPEFQPLCGEVDLTGYVISIVDGQGSSPAFYLTDEKLNFVKVRCFS
SLSQSGLEDVVKPCVLLALSNLQLRGQSTSPTPVVYAGDLTVFSTNPKEVHLQESLHQLR
NLVQGQENFLLTAEEKLSHLVKCDGLSSISSPALQTRTPVSTMDRRRETRTSVSFQQPVR
SLGSFTPVSRNPPAPNCSAEKDPSSLKRRRALDYLSRIPSPPPLSHLGSVASPCVNKTFN
PPRRSETPSTLKTVQTLARKPVDLPMEDEWVNDEELAMIDTQALLDGDLL
NT seq
8973 nt
NT seq
+upstream
nt +downstream
nt
atggatttaccctcaaaaaacatgtacgacacattcaaacatgaaatctggagagatctg
ggaccactggaccctgactggtttgaggcactgacagctcagacagtcactaatgaggga
agtgtctctgatcaagatgagctgtgtgctaaccaagaggggaattttaaaacacccttt
gataaaactacagtagaangtcagctgttttcaactcccaaagttttcagacactgtaga
gttgtatcacctgaaactgaggatgagcactctttcactgctgaacacgaaaaacaaacc
atgccatggacggtaacacaaagtccatgtttgtttccaggggtcccaggtgctaaatat
ggaggtatccagccttacagtcaggacagttttgatctgcttcatacaccacaaaaatcc
ccagtcagccatgccaagcttatatctgaaagtcttggtgcacagattcatccagatatg
tcatggaccagttctctgaataccccatcagcagtaccatccaccctgattttatctaaa
actgatgagagtccctgcccagtgagtgtttctgcagacaaaaatgttgtttttgtacgt
aagcttttcccttctctttcaaatgcttccgaagttgtgtcacccaaaaacaatgacatg
cctacccttcaccaaggtgttgtttcccctgaggctggtcagaatccagagccccatgac
tccccccagagttcactgaatcagagtgacagtgtttggagacagaagctaccagatacc
actgaggagggagaaattcgcagcaccatagcaggtgttcttgatggagctgaaaatgtg
ctctctatatttttcactagcagtagttcagcactgaggaaagtgaaaactgacagaatc
aaaagaaagcaaataattccaacaatagaacatggctgcagctctacagagatctcaaca
gcaaacaacgatgcatccagtgaacagagaacagctgatcaggaacatggcagatttccc
tcatccccaccagtaaaaactggagaatatggaatcacccagtggtctccattgagttta
tctgatattccacctagtactgtggatacttgccatgataatagtcttacaagacaagtg
gataacaatatcataccaggacaactgtggaatgacacttcttttggccagctaaggcca
cctgtgaaaatctcagactctggatttactaagagaaaatttgtttacactgttgactct
ttgaaactgcaagttcaaggaaaagaaacacagtctcagaagatggactcatcaccacgg
attccagattctggacaagaagtgtatatgaagcagttggggaaagctccagacgaagca
gactgttgcagtatccgaaagaatgagatggaaaaacagggaaatcttgctgaagaaaat
ctacctccttccgtacaagcaaaagtccaggatctcgacatgtcacagctttgcagagat
tttgcacaagactttagtcaaatgtcagacacaggtaaactgagtaaagtagcagaggat
actcctcgaaatggcttctgtccatcagcttgtctgtcagccatgaaacgagagaagcag
aaagcaaggcaagcaaaccttcaccatgactgtgatggtgtcagtaacagaagaaatgtt
tctgccactaataactccattaatgagggcacaacaagtgacagtggatttcactcagca
gatatcactcccatgactgcatcatcatttgttcttagctcagagaacaatcgtcaacag
tggactggctttaaaactgatatccacaagactactccttttcaatctacaaataaaaga
aatggaaaaccacattcagatgatattttacaagaagctaaaactgatgccaagttgtcc
actgcaatcaagaaaagccagacattgggccctggcaaagagaatgagttgcatatagag
tgcacatcagcacaactatccagcagtgcaaaaggaactgttaataacattaattgcatt
ccacttaatggtcaagctgatggcagtctgccagagaaaacagtttctcttccttacgtc
catgcatcgggattcaagaccgcttcaaataagcgtataccgatttcctcagccaacctg
gagagagccaagtgtctccttgaagagactgaaggggaaagaacctcaagtgatcagcac
atcaaatgtgcacctgactccaaagctaaaattagcagtcatggatcagtgaaaaataca
tctaactcaaaccaaccacctacttcaagtgaaaaatgtgtggatattagttgccagtta
acagcttcacaaaaagctgatgtgactgagctgtgcactctcatggaagaagctgatagc
cagtttgaatttacacagttcaaaactgcaaagctaaaacaacattgtcaagataatacc
acctctcccaaaaaagttgacaaagaacttgaccctgactttcttaccggtatagatttt
gatgacagttttagttcagatgctgaaaagcacctggtagtaactgacaaaatgacctta
gattcagatggtaaaacaaattgtgaaacagcaaacatcaaatccacaggtttttcagtg
tcaagtgcaatgaaacaagaaaatccctcagctgaagatgtgtcttcctcttcaaatcac
atctctgaatgcagtcacagtatgatgtcagctggacccaagaattgtgacagagctgga
cccattgaaacaagcaaggttgagaacaacaatcccttgatgcttggtgcgggatttaag
actgcaggaggaaatgttttgagagtttcaaaaaagtgtctgagtaaagctaaagctttg
tttgcagatttagaggaggaccttgtgacaagcaaaaaattgccggacaagcaaagtagt
gaaagtgacgctaaaacacaacaaaggcacagtgtagataatcatgctggcaaccttttg
catcataaagaggataaatggaagttcagaggttatgataataataccagggggatgatt
cagggctgtttttccaacaagaaggagtctgtctgttcagtcagaccagtgacagggatt
agagatgaagacactacaaaatgtcttaaaaacgtcaaaatggacacaaccacatgtcaa
agtgggttccagatggccaatggaaaagggatttctatttcaacaaaagctatgcaagag
tcagatgctttcttcaaagactgtgacgttattgacagtaacgctggcatgtcaggaaaa
cataagagcatggaacccttgcctggaagtgtcagtcacaagaaaaaccttgtgaaattt
aaaaatgttcaagggatgaaagtaaacttttctgaagaaccagtcaatgagcctgatgtg
gaggttcacaatcttgcttttaagaatgcaccgacattgatgactgctgcttctttccat
ggaaacccatcttcaactgcaaaggcattttcatccccctcatgcacaacatcaaaaaat
actggctcttccatcaatgagttaagcaatagtggtggattctgtacagccagtgggaag
aaagtatccatttcagctgatgcattgaaacaagcagagggtgttttgaatgaaattcat
acacttgaggaaacaaacaaacaagtaaagaagaaaggagactctttaaaaaccggtcat
ctcaccaatcaaatttgggtttcaccacataaaaatagtggatttcagacagccagtggt
aaaggagttaccatttcatctgcagctctaaagaaagcaaaaactctgttaagtgaatgt
gaaggagctgatgaagataaaattggtgtaggaccaacacattccaagcttccaattcat
ggtccaccccccagggatagtggatttcttgcagccagtggtagaccactggccttttca
tctgaagccctccagaaggctaaagctctgttcagtgacatcagtttcagtacagagagc
tcacctgtttcagacacaaggaacaatgacaagacacaagacaatgctgaaaatacagag
agaatgcattgtggtttctcaactgcggggggggggaaagtccatgtgtctcagaaaaat
ctgttgaaagcaaaacacattttgaaagaggtagatgatgcagatgcttccttcagggac
tgttacattatggacggaaacaatggcatgtcagtaaaacgtaaggaaagtatagcacct
gtgagtggaactggcagcgagaagaaaatcttttcaaaatttaaaccacatcagaaggtg
acaaacattttggaagagcctagaagtggacacactgagtttgaaaatgtgaacattgga
acagttttaacgcatgaaaagatgctgcctcttaatgtagagattaacaaagatgttttc
aagaacacaccggattctaccgagacagtttctttacatggagacccatctttgatggca
aagccactttattccccgttgtgcacatcaaagaacattggtgcctctgccatcagtgag
ttaaacagtggtgggggattctgtacagccagcggaaagaaagtatccgtgtctgatgac
gcaatgacaaaagcaaagtctcttttgaatgaaagtgctacatttgaggacacaaacaaa
caactgaaacaaaaagatgacactttgcctccacagaacggtggatttcagacagccagt
ggaaaaggagttgccatttcatctgcagctctaaagacagcaaaaactctgttacgtgaa
tgtgaaggagctgatgaagataaaaatggtgtaggaccaacacattccaagcttccagtt
catgttccaccacccaagaatggtggatttcttgcagctagtggtaggccactggccttt
tcatctgaggcccttcagaaggctaaagctctgttcagtgacatcagtttcagtgcagag
atcccacctgtttctgacactgtccattctgatgttcgaaacaatcctgaaaagatacac
tgtggtttctcaactgcagggggaacaaaagtccatgtgtcacagaaaaatctcttgaaa
gcaaagaaccttttgaatgtatttgctgatggggagtgtcatgattcaagctcatactca
aacccacatgacacagataagtcagatctttcaaaagagaaaagatcttcagattataat
cttacctcttccagtgacaaagatatgcctactaatgaaagtgccactcagattgtcaaa
tctttaacctctttgcaagagactgaccatacaaatgcctttaagtttaaagaactcaag
attaccccattaatggtgggcaaaccccatgacagccctggagaggaactgactggtgtg
ttggactatgaaataaattggacaagcagcagtgacgtatctaaggtcaaaaggacagaa
aggtcttcagttcttaactttcagtcactaaacctaagaggctgttctgaaacccaggag
aggtttcttgctcaggaagctctcgactgcactatggctttgttagaggatgaaagtcta
gctagccaaattccctcaatgacttcagaaaacttgccactccaagattatcctatatcc
ggcaaccgatctgtagaggaacaaaaaggaagagggaaaagactgttagaggaatcaaac
atgacgggtcagcctcccctgaaaaggcggttactggaagaatttgacaggactgttgat
ggtccaagaggttcaacagtccatccagaaaaaagtagtccaaatggtgtgatgaaagac
aggagagttttcaagtacagtgtccctcttcatccaaacatcacaaggccacactggagt
ggaaagaactatgtggaagctacattacaaaagacagctccaaaacaacacttaaccccg
ggagactgcagatcagcacattccaaaaagccagcgtttgttcctcctttgttcaaaaat
gcaaaggcagagagttgcaagaacacagtgctcaaagacagcataagaacaccttctgca
tttgttcctccattcaaaaaacaaagaactattatccaagagagctcctctaaaccacag
gaggaggagggtaaacaacaccatctcttagtaacacccattaacagtaacacttatgta
ccacccactaaaaaaacacaaaacactacagctgtaactggtcataaaagcaaagacatt
cagagtgtggccttaactgacactgcaaatgataacctgatgcatcttcaaaaagttcct
gttggctgtggatcagacagttctgctacagagtcatcacatgtggataatacattgtcc
agaagccaagacatgtttcagaatcttcataacatagggctggcacgagatatgcaagac
atgaggatcaggaaaaagaagcgacagaccattcgacctataccgggcagtttgtttcta
acgaaaacctccggagtgtcgaggatatctttaaaagctgcattaaatggaaggcctcct
tcaagatacaccccaaaacagctgtatcgacatggagttcatcagcatgtgtgtgagatc
accagtgggactgcagaatctcttcgcttcaatttacagcagttcatcaaacaggaagca
tttttagatggagggggtgttcagcttgctgatggcggatggctgatccccagcaatgat
gggactgcagggaaagaagagttctatagagcgttatgtgacaccccgggtgtggatcct
aaactgatcagtgaggagtgggtttacaatcactaccgatggattgtgtggaagcaggcc
tccatggaaagatcatttccagaaacaatgggcagcctctgtctcacgccagagcaggtt
ctcctacaactgaagtacagatatgatacagaggtggaccacagctgcaggccggctctg
agaaagatcatggagaaggacgacacagcagccaaaaccctggtcctctgcgtttgcggt
gtcgtttccaggggtcactccccaaaaagacagcgtttcagtgacaccaagacgccagaa
ggtgttgatgccaaggttgaaaacccttctgcagttgtttggctgacagacggatggtat
gccataaaagccctgctggatgaacctttgactgccatgcttcacaaaggtcgactagct
gtcggggggaagttgatcatccacggggcgcagctggtgggatcacaagatgcttgctcc
cctttggaggcacctgactctctcatgttaaagatttgcgccaatagcagcagacccgct
cgatgggatgctaaactgggatttcacagggatccacggccatacctgcttcctgtctcc
tgtttgtacagcaatggaggaccagtaggatgtgtggacatcatcatactgagaagctac
cccatacaatggatggagaggaaactagatggaggcgttgtgttccgttcagttcgcgca
gaagagaaggaggcgagacgatacaacagccacaaacaaaaagctatggagatcctgtgt
gccaagattcaagctgaatttgaaaaggaggagaaaagtaacaacaaacctcagcgtaga
aggcagacagtcagtcatcaggatattgcaagtcttcaagatggagaggagctctatgaa
gcagttggggatgacccagcttaccttgaggttcacttgagtgaacagcagttggagact
ctacataactacaggcgttctctgatggaaaagaagcaggctgaactgcaggatcggtac
caacgagctgtagaaaatgcagaaaacggcgaaggtggctgtcctaagcgagacgttaca
cctgtgtggagactctgctttgctgactccatggaccaacccggcagtgtttaccagttg
aacctttggcgaccgtccttggatcttcagtctctactgaaggaaggttgtcgatacaaa
gtgtataaccttaccacttcagatggaaagaaacatggtggtagctcaactgttcagctg
actgggacaaacaaaacacagtttcaggacatacaggcttctccggaatggttattaaca
cgttttcaaccgagggtctcaagctcttttgtggatcttcaaaacccagaattccagccg
ctgtgtggagaggttgatctcacaggatatgtcatcagtatcgtagatggacagggttcc
tctcctgcattttatttgactgatgagaaactgaactttgttaaagtgcgctgttttagc
agcttgtctcagtctggcttagaagatgtggtaaaaccttgtgtgctgttggctctgagc
aacctgcagctgagaggtcagtccacatctcccactcctgttgtgtatgctggagatctc
actgtcttctcaacaaaccccaaggaagttcatctacaggaatcccttcaccaactcaga
aacctggtccagggtcaagagaacttccttcttactgctgaggagaaactttcacattta
gtcaaatgtgatggcctgagctccatctcttctccagctctacaaacaaggaccccagtt
tctacaatggacagaagacgagaaacaagaacaagtgtgtcatttcagcagccagtcaga
agtcttggatccttcacacccgtcagcaggaaccctcctgcaccaaactgttcagcagag
aaagacccgagcagcctgaagaggaggagagctctggactatctgtctcgtatcccgtct
ccaccccctctctcccatctgggctcagtggcttctccatgtgtaaataagacattcaac
ccccctcggaggtctgagacacctagcactttaaaaactgtacagactctagctcgcaaa
cctgtcgatttaccgatggaggacgagtgggtgaatgacgaagaactggctatgattgat
actcaagcattgcttgatggtgatttactgtag
DBGET
integrated database retrieval system