Micropterus salmoides (largemouth bass): 119883105
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Entry
119883105 CDS
T07309
Name
(RefSeq) lissencephaly-1 homolog isoform X1
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam00565
Ether lipid metabolism
msam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
119883105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msam03036
]
119883105
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msam04147
]
119883105
Chromosome and associated proteins [BR:
msam03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119883105
Exosome [BR:
msam04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119883105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_Nup120_160
WDR90_beta-prop_4th
Beta-prop_DCAF4
LisH
WD40_RFWD3
LisH_PAC1
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Nucleoporin_N
Pox_A_type_inc
Beta-prop_NUP159_NUP214
DUF2570
Beta-prop_WDR11_2nd
ARMC9_LisH
SutA-RBD
LisH_2
Motif
Other DBs
NCBI-GeneID:
119883105
NCBI-ProteinID:
XP_038549554
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDNNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVSQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDLTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVNIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECISWAPESAYPTIQDATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGILFHPGGKFIVTCADDK
TLRIWDYKNKRCMKTLGAHEHFVTSLDFHKAAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacaacggcaacgagatgaactaaatcgagcgatagccgattatctacgt
tccaatggatatgaagaagcatactctactttcaagaaggaggcggaattagataataat
gaagaattggataagaagtacgccggccttttggaaaaaaaatggacctcagtcatcaga
ttacaaaagaaggtgatggaacttgaatccaaactgaatgaagctaaggaggagatcacc
ctgggtgggcccgtaagtcagaagcgcgaccccaaagagtggatcccacgtccaccagag
aggtacgcgctaagtggccaccgcagtccagtcacccgcgtcatcttccacccagtcttt
agtgtcatggtgtctgcttctgaggacgcaacaataaaggtgtgggactacgagacggga
gactttgagcgcacactgaagggtcacacagattcggtgcaggacatctcttttgacctg
accggcaaactgctagcatcctgctctgcagacatgactatcaagctgtgggatttccaa
ggctttgagtgcatcaggaccatgcatggacatgaccacaatgtgtcgtctgtaaacatc
atgcccaatggagatcacatcgtttctgcctcaagggacaaaaccataaaaatgtgggag
gtggccactggctactgtgtgaagaccttcacaggccacagggagtgggtccgtatggtg
cggcccaaccaggacggcacactgattgccagctgctccaacgatcagacggtgcgtgtg
tgggtcgtggcgtccaaagagtgcaaggctgagctgcgggagcatgaacatgtggtggaa
tgcatctcctgggcaccagagagtgcctaccccaccatccaggatgccacaggctctgag
tccaagaagagtggtaagccaggccccttcctgctgtctggctccagagacaaaaccatc
aagatgtgggatgttagcattggcatgtgccttatgacactggttggccatgacaactgg
gtgcgtggtatcctcttccaccctggaggcaaatttattgtgacctgtgcagatgataag
accttaaggatctgggactacaagaacaagcgctgcatgaaaaccctcggtgcccacgaa
cactttgtaacctcccttgatttccacaaggctgctccttatgtggtcactgggagtgta
gatcaaacagtaaaagtgtgggagtgccgctga
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