Micropterus salmoides (largemouth bass): 119883222
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Entry
119883222 CDS
T07309
Symbol
hnf1ba
Name
(RefSeq) LOW QUALITY PROTEIN: hepatocyte nuclear factor 1-beta-A
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119883222 (hnf1ba)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119883222 (hnf1ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
LolA
Motif
Other DBs
NCBI-GeneID:
119883222
NCBI-ProteinID:
XP_038549713
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPNPPSFGVKLESLPMSPAPPQS
GKMNGADSDXKPVFHTLTNGHSKGKLSGDEGSEDGDDYDTPPILKELQSLNTEEAAEQRA
EVERMLAEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAAL
YTWYVRKQREILRQFNQAVQGSGTNMTDKGNQDPAFFFPEFNPSGQGMGQPGDEVGSEPS
CKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLG
SNLVTEVRVYNWFANRRKEEAFRQKLAMDAITVPPHSLNPLLSHSSPHHPQTSASPPMRY
SQGPGEVTSSTTISHHSSNGMSTSQSVLQQVSPGGLDHSHSLLSPDAKMISGSGGGLPPV
STLTNIHSSHHSHQQTQNLIMPLSGVMAIAQSLNTSQSQTVPVINSVAGSLAALQPVQFS
QQLHSPHQQSLMQQSPSHMSQQPFMATVTHSHMYSHKQEPPQYSHPSRFPSAMVVTDSNS
IGTLSSMSSSKTDAPVNKMVQLGGLSWCPLQAW
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttctctaaaatggtatccaagctgacatccctgcagcaggagctcctcagcgccctg
ctggactcaggagttaccaaagatgttctgatccaggccctggatgatatggaccccaac
ccgccgagctttggagtaaaactggagagcctgcccatgtcgcccgctcctcctcagagc
ggcaagatgaacggagcggactccgatncgaagcccgtcttccacacgctcaccaacggc
cacagcaagggcaagctgtccggggacgagggctccgaggacggggacgactacgacacc
ccgccgatactgaaggagctccagtcactcaacaccgaggaggccgccgagcagagggcg
gaggtggagcgcatgttggcagaggatccatggcgtgctgcccgcatgatcaaaggttac
atgcagcagcacaacatcccccaacgggaggtggtggacgtcacagggctgaaccagtct
cacctctcacagcacctcaacaaaggcacgcccatgaaaacacagaagcgagcggccctt
tacacctggtatgtcaggaaacagcgggaaattctccgacagttcaaccaggcagtgcaa
gggtctggcaccaatatgacagacaaaggcaatcaggatccggcattttttttcccagag
ttcaacccgtctggtcagggcatgggacagcctggtgacgaggtcggcagcgaaccctcc
tgcaagaaaatgagacgtaaccgtttcaaatgggggcctgcgtctcagcaaatcctgtac
caggcttatgaacggcagaagaaccccagcaaagaggagcgggaagctttggtagaagag
tgcaacagagccgagtgtcttcagaggggcgtctccccctccaaagctcagggccttggc
tctaatctggtcaccgaagtgcgagtctacaactggtttgccaaccggcgtaaagaggaa
gccttcaggcagaagttggccatggatgcaatcactgtacctccccacagcctcaaccct
ctgctgtcacacagttcaccacatcatccccagaccagcgcttcgcctccaatgcgttac
agccaaggccccggtgaggtcacctcctccacgaccatcagtcaccacagtagcaacggg
atgtcgaccagccagtcggtgctccagcaggtgtctccgggaggattggaccacagccac
agtctgctgtcacctgatgccaagatgatttcaggttcaggtggaggacttccaccagtc
agcactctgaccaacatccacagttcccatcatagccatcagcagactcagaacctcatc
atgcctctatctggggtcatggccatagcacagagtttaaacacatcgcaatctcagacg
gtgccagtgatcaacagcgtggcaggcagccttgcggcgctgcagccggtgcagttttcc
caacagctccacagcccccaccagcagagcctgatgcagcagtcccccagccacatgagc
cagcagccgttcatggctactgtcacacactcgcacatgtattctcacaagcaagagccc
ccgcaatattcccacccatcacgtttcccctcggccatggtggtcacagactccaacagc
atcggcacactcagctccatgtcctccagcaagacggatgctcctgtaaacaagatggtg
caactcgggggtctttcctggtgtcctcttcaagcttggtga
DBGET
integrated database retrieval system
